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25 protocols using annexin 5 pi kit

1

Apoptosis Analysis of LPS-Treated HK-2 Cells

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HK‐2 cells were seeded at a density of 4.0 × 105 per well. After the treatment of LPS, HK‐2 cells were harvested and suspended in binding buffer. Then, Annexin V/PI kits (KeyGEN, Nanjing, China) were applied for the detection of apoptosis. Flow cytometric analysis for the apoptotic rate were conducted using a FACSAria flow cytometer (BD Biosciences, San Jose, CA, USA). To detect the apoptosis levels of renal tissues, we applied the TUNEL assay. To quantify the apoptosis level of tissues, we analyse the brown TUNEL positive cells per field in each group.
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2

Evaluating ESCC Cell Proliferation

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The proliferation of ESCC cells was detected by the Cell Counting Kit-8 (CCK-8, Beyotime Institute of Biotechnology, Jiangsu, China). Briefly, cells were placed into 96-well plates at the density of 1000 cells per well before addition of CCK-8 and the absorbance was measured at a wavelength of 450 nm. Five replicates were conducted for cells in each group and the experiments were repeated three times. For the clone formation assay, cells transfected with the indicated lentivirus were seeded in six-well plates in triplicates at a density of 500 cell per well and incubated at 37 °C with 5% FBS for 14 days. The cells were fixed with 4% polyoxymethylene and stained with 1.5% methylene blue. The colonies were counted and analyzed by Image J software (NIH, Bethesda, MD, USA). For cell cycle analysis, the indicated cells were collected, rinsed with cold PBS twice, and labeled with propidium iodide (PI) solution (BD Cycletest Plus DNA Kit, San Jose, CA, USA). For cell apoptosis analysis, Annexin V/PI kits (KeyGEN, Nanjing, China) were used to detect apoptotic cells. The cells were then analyzed by a fluorescence-activated cell sorter according to a previous report.21 (link)
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3

Evaluation of D-pinitol's Effects on Diabetic Cells

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D-pinitol (purity: 95%, Lot No: 441252) and streptozotocin (STZ) were from Sigma Chemicals Co. (St. Louis, MO, USA). Paraformaldehyde (PFA), dimethyl sulfoxide (DMSO), bovine serum albumin (BSA), trypsin/EDTA solution, D-glucose, and 3-(4,5-dimethylthiazol)-2,5-diphenyl-2-H-tetrazolium bromide (MTT) were purchased from Solarbio (Beijing, China). Dulbecco’s Modified Eagle’s Medium (DMEM) and fetal bovine serum (FBS) were obtained from GIBCO (Grand Island, NE, USA). Hoechst 33258 and PI were purchased from Beyotime (Shanghai, China). AGE-BSA was purchased from Abcam (Cambridge, UK). ELISA kits and necrosulfonamide (NSA) were purchased from R&D systems (Minneapolis, MN, USA). Annexin V/PI Kit was from Key Gen (Nanjing, China). The primers were synthesized by Sangon Biotechnology (Shanghai, China). The MFG-E8 antibody was purchased from MBL (Woburn, MA, USA) and R&D (Minneapolis, MN, USA), and antibodies RIPK1, MLKL, phospho-MLKL, and β-action were purchased from Abcam (Cambridge, UK). RIPK3 and HMGB1 antibodies were purchased from Proteintech (Wuhan, China). All other reagents are standard commercial high purity materials.
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4

Apoptosis Assay of QFG Treatment

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Cells were seeded into 6-well plates (1.5 × 105 cell/well), treated with different doses of QFGs (05, 1 and 2 mg/mL) and grown for 24 h. Then, cells were stained by using an Annexin V/PI kit (KGA108; KeyGen BioTech, Nanjing, China) according to the kit’s manual. Annexin V-positivity and PI-negativity (lower-right quadrant) represented early apoptotic cells, whereas Annexin V-positivity and PI-positivity (upper-right quadrant) represented late apoptotic cells.
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5

Evaluating Cellular Response to CPX

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CPX (Sigma, St. Louis, MO, USA) was dissolved in ethanol to make the concentration of the stock solution of 1x105μM. The final concentration of ethanol in the medium was no more than 0.02%, at which cell proliferation/growth or viability was not obviously altered. 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) and propidium iodide (PI) were purchased from Sigma. The Annexin V-PI kit was purchased from Keygen (Nanjing, China). Enhanced chemiluminescence (ECL) was purchased from Pierce (Rockford, IL, USA). Antibodies to ferritin, Bim, Mcl-1, cyclins A and D, Caspase-3, Rb, c-Myc, phospho-Rb, secondary antibodies of HRP-conjugated donkey anti-rabbit, and sheep anti-mouse were obtained from Cell Signaling Technology (Beverly, MA, USA). The antibody to p21 was purchased from BD Bioscience (San Jose, CA, USA), the antibody to β-catein was obtained from Millipore (Billerica, Massachusetts, USA), and the anti-GAPDH antibody was obtained from Kangchen Bio-Tech (Shanghai, China).
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6

Quantifying Apoptosis in Leukemia Cells

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Cell apoptosis was assessed by flow cytometry using an Annexin V-PI Kit (Nanjing Keygen Biotech. Co. Ltd., Nanjing, China) according to the instructions. MV4-11 and MOLM13 cells were treated with DMSO, Gilteritinib (2.5 nM) alone, ATO (0.5 µM) alone or Gilteritinib (2.5 nM) plus ATO (0.5 µM) for 48 h and treated with DMSO, Gilteritinib (2.5 nM) alone, TM (0.2 µM) alone or Gilteritinib (2.5 nM) plus TM (0.2 µM) for 24 h. The cells were washed in phosphate buffer saline (PBS) and resuspended in binding buffer, and then stained with 5 µL propidium iodide (PI) and 5 µL Annexin V-Fluorescein Isothiocyanate (FITC) at room temperature for 15 min. The samples were examined by flow cytometry using a FACS Calibur system (BD Biosciences, Franklin Lakes, NJ, USA) followed by apoptotic cells analysis with Cell-Quest Pro software (BD Biosciences, Franklin Lakes, NJ, USA).
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7

Apoptosis Assay Using Annexin V/PI

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Cells (1 × 106 cells/well) were seeded in a 6-well plate and incubated for 24 h. Using an Annexin V/PI kit (KeyGEN, Nanjing, China), the percentage of apoptotic cells was checked on a FACScalibur flow cytometer (BD Biosciences, San Jose, CA, USA).
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8

Flow Cytometry-Based Apoptosis and Cell Cycle Analysis

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The cell apoptosis and cell cycle were measured by flow cytometry following the manufacturer's instructions. In brief, cells in 6‐well plates were treated with different concentrations of 5‐FU or oxaliplatin. Cell apoptosis was assayed by an Annexin V/PI kit and cell cycle distribution was assayed by a cell cycle assay kit (KeyGen, Nanjing, China), both of which were followed by flow cytometry analysis (Beckman Coulter, California, USA). The data were evaluated by ModFit and CytExpert.
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9

Apoptosis Pathway Protein Assay

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Bax, Bcl-2, cleaved caspase-3, cdk6, cytochrome c, cyclin D1, cyclin E1, GAPDH, IκB-α, NF-κB/p65, p21, secondary antibodies, and RIPA buffer were from Proteintech (Wuhan, China). Phospho-IκB-α (Ser 32) primary antibody was purchased from Cell Signaling Technology (Cell Signaling Technology, CST, Beverly, MA, USA). The Annexin-V/PI Kit, mitochondrial membrane potential kit, Hoechst 33258 assay kit, DNA fragmentation kit, and Caspase-3, -8, and -9 kits were purchased from keyGEN BioTECH (Nanjing, China). The nuclear and cytosolic protein extraction kit was purchased from Beyotime (Nanjing, China). The qRT-PCR kit was purchased from Transgene (Shenzhen, China). All other reagents and chemicals were purchased from standard commercial sources.
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10

Glioblastoma Cell Line U87-MG Maintenance

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The human glioblastoma cell line, U87-MG was bought from ATCC and maintained in Dulbecco's modified Eagle's medium (DMEM) (Gibco; Thermo Fisher Scientific, Inc., Waltham, MA, USA) and supplemented with 10% fetal bovine serum at 37°C in a humidified 5% CO2 incubator. Although one research published in Science Translational Medicine revealed that glioma cell line U87-MG from ATCC was likely to be a bona fide human glioblastoma cell line of unknown origin (30 (link)), there was a research also declared that studies of U87 still reflected brain-cancer biology and didn't need to be tossed out (31 (link)). So, we still used the U87-MG cell line to study the glioblastoma just like this research (32 (link)) Chloroquine (CQ) was obtained from Sigma-Aldrich; Merck KGaA (Darmstadt, Germany). Bevacizumab was obtained from Roche Diagnostics (Basel, Switzerland). Anti-Bim, anti-Bcl-2, anti-Bax, anti-survivin, anti-cleaved caspase-3, anti-cleaved caspase-8, anti-cleaved caspase-9, anti-PARP, anti-LC3B-I, anti-LC3B-II, anti-SQSTM1 (p62), anti-Akt, anti-p70S6K, anti-mTOR, anti-GAPDH, anti-p-Akt (T308), anti-p-Akt (S473), anti-p-p70S6K (T389) and anti-p-mTOR (S2448) antibodies were from Cell Signaling Technology, Inc. (Danvers, MA, USA). MTT kit was from Thermo Fisher Scientific, Inc. Annexin V/PI kit was from Nanjing KeyGen Biotech Co., Ltd. (Nanjing, China).
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