To generate the Pif1A mutants, we employed the “CRISPR/Cas9 method”, the gRNA was designed to recognize a 19-nt target sequence and act to direct Cas9-mediated cleavage of both DNA strands within the target site.
To generate UAS-Pif1A-RI, UAS-Pif1A-RG, and UAS-eGFP-Pif1A-RG transgenenic flies, we amplified the full length Pif1A cDNA with the primers below and cloned it into the pUAST-attb vector. These constructs were then transformed into VK33 embryos using the standard P-element-mediated transgenesis protocol.
Pif1A- RG-FCTGCGGCCGCGGCTCGAGATGGCTGAAAACCAAACCAAAACG
Pif1A- RG-RTCACAAAGATCCTCTAGATCAGAGCCGGGCATTCTCGGACGG
Pif1A- RI-FCTGCGGCCGCGGCTCGAGATGGGCAACGAGGAATCCT
Pif1A- RI-RTCACAAAGATCCTCTAGACTATTTCTTAGCTCTGAACAAG
eGFP-Pif1A- RG-F TTCGTTAACAGATCTGCATGGTGAGCAAGGGCGAGGA
eGFP-Pif1A- RG-R ATCTCGAGCCGCGGCCGCCACTTGTACAGCTCGTCCATG