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Poly d lysine

Manufactured by Thermo Fisher Scientific
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Poly-D-lysine is a synthetic polymer that enhances cell attachment and growth. It is commonly used as a coating for cell culture surfaces to promote cell adhesion and proliferation.

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176 protocols using poly d lysine

1

Subcellular Localization of BRI2 Protein

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Glass 4-chamber slides (Nunc) were coated with 0.1-mg/ml Poly-D-Lysine (Invitrogen) diluted in sterile water. The surface of each well was covered with the Poly-D-Lysine solution for 5 minutes at room temperature, then rinsed with sterile water, and allowed to air dry 2 hours before the use. Stably transfected Hek293 cells were plated 2000 cells per well and cultured in growth media 24 hours. The slides were then fixed for 15 minutes at 37 °C in 4% paraformaldehyde, blocked with 2% BSA (Sigma) and 1% Triton (Acros Organics) in PBS overnight at 4 °C. The slides were incubated with primary abs and with the appropriate fluorescently labeled secondary ab for 60 minutes at 37 °C in the dark. BRI2 proteins were detected with anti-c-Myc and secondary Alexa Fluor 594 goat anti-mouse. Endoplasmic reticulum (ER) was detected with anti-Calnexin, secondary Alexa Fluor 488 goat anti-rabbit. The Golgi apparatus was detected with GM130, secondary Alexa Fluor 488 goat anti-rabbit.
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2

Isolation and Culture of Mouse Neurons and Microglia

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Neurons were isolated from the cortex and hippocampus of mouse embryos at 18.5 day post-coitum as previously described [30 (link), 31 (link)]. Briefly, mouse cortical tissues were digested with papain (Sigma-Aldrich) for 15–20 min at 37 °C and dissociated into single cells in Neurobasal medium (Invitrogen, Thermo Fisher Scientific) containing 2 mM l-glutamine and 2% B-27 (Invitrogen, Thermo Fisher Scientific) by pipetting. After centrifugation, cells were seeded onto 24-well plates coated with poly-d-lysine (Invitrogen, Thermo Fisher Scientific) with Neurobasal medium at a density of 1 × 105 cells per well. Primary neurons cultured for 5 days were used for experiments. Microglia were isolated from the mouse cortex at postnatal day 1 or 2 as previously described [32 (link)]. Briefly, mouse cortices were dissociated and suspended in DMEM/F12 medium containing 10% fetal bovine serum. Cells were then cultured on flasks coated with poly-d-lysine. After 12–14 days, microglia were detached from mixed glial culture by the shake-off method and seeded onto 24-well plates coated with poly-d-lysine. The purity of neurons and microglia was > 95% based on the observation of cell morphology.
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3

Cellular Calcium and pH Imaging Techniques

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DMEM, glutamine, HBSS, trypsin-EDTA, penicillin/streptomycin solutions were from PanEko (Russia), heat inactivated FBS, Neurobasal medium, Tyrode solution, B27 supplement, Gluta-Max solution, poly D-lysine, Ca-phosphate transfection kit were from Invitrogen (USA), potassium gluconate, sodium gluconate, BCECF, BAPTA-AM, bicuculline, nigericin, monensin, tetrodotoxin, bafilomycin were from Sigma, X-tremeGene 9 was from Roche (France). Glass bottom dishes were from Mattek. NIH/3T3 cells were from ATCC, HeLa Kyoto cells were provided by EMBL. R-GECO encoding vector was from Addgene (https://www.addgene.org/32465/), pHyPer-N and pHyPer-C vectors was from Evrogen. pCS2 vector (Xenbase 1221270) was used for RNA preparation.
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4

Competitive Binding Assay for US28 and CX3CR1

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Stable inducible clones of US28 and CX3CR1 cells were seeded at 10,000 cells/well in poly-D-lysine (Invitrogen) coated 96-well tissue culture plates (Nunc). One day after seeding US28 and CX3CR1 receptor expression was induced by tetracycline (Invitrogen; 3,6 ng/mL and 5 ng/mL, resp.) aimed at obtaining 5–10% specific binding of the added radioactive ligand. One day after induction, cells were assayed by competition binding for 3 h at 4°C using 20–70 pM 125I-CX3CL1 as well as unlabeled ligand 10 pM to 100 nM in 50 mM Hepes buffer pH 7.4, supplemented with 1 mM CaCL2, 5 mM MgCL2, and 0,5% (w/v) bovine serum albumin (BSA) (binding buffer). After incubation, cells were washed twice in ice-cold binding buffer and supplemented with 0,5 M NaCl. Determinations were made in quadruplicate.
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5

Culturing Primary Mouse Cortical Neurons

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All mice were handled in accordance with the guideline for animal care and use of the Yonsei University. All experimental procedures were approved by the Institutional Animal Care and Use Committee of the Yonsei University (permissions IACUC (2017-10-647-01 and 2018-01-689-01)). Cerebral cortices were removed from gestational day 14.5 mouse embryos (Orient, Gyeong-gi, Republic of Korea) and mechanically dissociated as previously described79 (link). Briefly, dissociated cortical cells were plated at a density of 5×106 cells per well of six-well plates or at 1×106 cells per well of 24-well plates that were precoated with 100 μg/mL poly-d-lysine and 1 μg/mL laminin (Invitrogen, Carlsbad, CA, USA). Cultures were incubated at 37 °C in Minimum Essential Medium (MEM, Gibco) supplemented with 0.6% glucose (Sigma-Aldrich), 1 mM sodium pyruvate (Sigma-Aldrich), 2 mM l-glutamine (Sigma-Aldrich), penicillin-streptomycin (100 U/mL), and 10% FBS (Gibco) in the atmosphere of 95% air and 5% CO2. After 24 h, culture medium was changed to Neurobasal medium (Invitrogen) supplemented with 2% B-27 (Gibco), 0.5 mM l-glutamine and 10 μM cytosine β-d-arabinofuranoside (Ara-C, Sigma-Aldrich). At 4 DIV, cultures were treated with the indicated drugs that were dissolved in the same medium.
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6

Dissection and Culture of Murine Neurons

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Following our previous method,23 (link),24 (link) TGs from male WT mice (1–2 months old) were dissected and digested with 1 mg/mL collagenase (Worthington Biochemical Co.) and 5 mg/mL dispase (Invitrogen) for 1 h, then triturated. Neurons were cultured in DH10 medium (1:1 DMEM:Ham F12, Invitrogen) on coverslips coated with poly-D-lysine and laminin (Invitrogen), and incubated with 5% CO2 at 37°C overnight for electrophysiological experiments.
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7

Binding Assay for US28 Chemokine Receptors

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Stable inducible clones of the US28-cells were seeded in poly-D-lysine (Invitrogen) coated 96-well tissue culture plates (clear plates, Costar). The number of cells seeded was determined by the apparent expression of receptors and was aimed at obtaining 5–10% binding of the added radioactive ligand. US28 receptor expression was induced by tetracycline one day after seeding the cells (0.25 µg mL−1; Invitrogen). 48 hr post seeding, cells were washed twice in ice-cold binding buffer (50 mM HEPES pH 7.4, supplemented with 1 mM CaCl2, 5 mM MgCl2 and 0.5% (w/v) bovine serum albumin) and assayed by competition binding for 3 hr at 4˚C using 10–15 pM 125I-CX3CL1, 125I-CCL5, or 125I-CCL3 as well as unlabeled ligand (10 pM to 100 nM in binding buffer). After incubation, cells were washed twice in ice-cold binding buffer, supplemented with 0.5 M NaCl.
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8

Cortical Neuron Culture Protocol

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All mice were handled in accordance with the guideline for animal care and use of Yonsei University. Cerebral cortices were removed from gestational day 14.5 mouse embryos (Orient BIO, Seongnam-si, Gyeonggi-do, Republic of Korea) and mechanically dissociated. Briefly, dissociated cortical cells were plated at a density of 5×106 cells per well of six-well plates that were precoated with 100 µg/ml poly-D-lysine and 1 µg/ml laminin (Invitrogen). Cultures were incubated at 37°C in Minimum Essential Medium (MEM, Fisher Scientific, Waltham, MA, USA) supplemented with 0.6% glucose, 1 mM sodium pyruvate, 2 mM L-glutamine, penicillin-streptomycin, and 10% FBS in the atmosphere of 95% air and 5% CO2. After 24 h, culture medium was changed to Neurobasal medium (Invitrogen) supplemented with 2% B-27 and 0.5 mM L-glutamine. At 4 DIV, cultures were treated with the indicated drugs that were dissolved in the same medium.
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9

Embryonic DRG Neuron Culture Protocol

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Embryonic DRG spot cultures were prepared as described by Gerdts et al. (Gerdts et al., 2013 (link)). Briefly, DRG neurons were collected from Cas9 knock-in embryos (Jackson Laboratory) or WT and Stmn2 KO littermates on embryonic day 12.5–13.5, genotyped, stored in Hibernate-A Medium (Thermo Fischer) overnight, and cultured the following day. Neurons from both male and female embryos were used and pooled during experiments. DRG neurons were cultured on plates coated with poly-D-lysine and laminin in neurobasal medium (Invitrogen) supplemented with 2% B27 (Invitrogen), 50 ng/mL nerve growth factor (Harlan Laboratories), and 1 uM 5-fluoro-2′-deoxyuridine (Sigma). The neurons were kept at 5% CO2 and 37°C over the course of the experiment and half-volume media changes were done every 3–4 days. Polymerization tracking studies were conducted on DIV6-7. Axon outgrowth assays were conducted on DIV3. Cell lysates were collected for Western blot and mass spectrometry on DIV7.
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10

Culturing Primary Hippocampal Neurons from Mice

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Primary hippocampal neurons were cultured from postnatal day 0 (P0) C57BL/6 mice. Bilateral hippocampi were dissected, and the hippocampal tissue was washed twice with PBS and digested with 0.25% trypsin (Gibco, CA, USA) for 10 minutes. An equal volume of DMEM-F12 medium (Gibco, CA, USA) with 10% fetal bovine serum (FBS) (Gibco, CA, USA) was added to stop digestion. The supernatant was collected and centrifuged at 1000 rpm for 5 minutes, the resulting supernatant was discarded, and implant solution (DMEM-F12 medium with 10% FBS) was added. The cell suspension was dripped onto a cover slip coated with poly-D-lysine (Invitrogen, CA, USA) and incubated at 37° C. After half of an hour, neurobasal medium (Gibco, CA, USA) with Pen-Strep (Invitrogen, CA, USA), B27 (Gibco, CA, USA) and GlutaMAX (Thermo Fisher, MA, USA) was added. Si-055714, si-NC, miR-7684-5p inhibitor and miR-NC were obtained from Generalbiol (Chuzhou, China). Neurons were transfected with Lipofectamine™ 2000 (Invitrogen, CA, USA) on DIV4.
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