The largest database of trusted experimental protocols

176 protocols using lsm 710 meta

1

Live-Cell Imaging of HeLa Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
HeLa cells were cultured on 35 mm imaging µ-dishes with polymer coverslip bottom (Ibidi). Live-cell imaging was performed on a Zeiss LSM 710 META laser scanning confocal microscope using an ×63 oil-immersion objective (PlanApochromatic, numerical aperture (NA) 1.4), at 37 °C in a 5% CO2 humidified atmosphere. Microscope hardware and image acquisition were controlled with LSM Software Zen 2009. Images were analyzed using ImageJ (NIH) and Icy71 (link).
+ Open protocol
+ Expand
2

Immunofluorescence Microscopy Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunofluorescence microscopy, cells were either fixed with 4% (w/v) paraformaldehyde for 15 min at room temperature or with methanol for 5 min at −20°C. Antibodies were diluted in PBS with 0.1% (v/v) Triton-X100 and 10% (v/v) horse serum. The cells were washed in PBS with 0.1% (v/v) Triton-X100 and incubated for 1 h with primary antibodies. The cells were washed again in PBS with 0.1% (v/v) Triton-X100 and incubated with appropriate secondary antibodies for another 1 h. The cells were washed again first in PBS with 0.1% (v/v) Triton-X100, then PBS, and finally in H2O. In the end, coverslips were mounted onto glass slides using Aqua-poly/Mount mounting medium (Polysciences). Samples were analyzed using widefield fluorescence microscopes (Leica DMRA2 or Zeiss AxioImager D2) or a confocal laser scanning microscope (Zeiss LSM 710 META). Unless otherwise indicated, images were obtained by confocal microscopy and processed using Zeiss LSM Image Browser and Adobe Photoshop software or Fiji (Schindelin et al., 2012 (link)).
+ Open protocol
+ Expand
3

Confocal Imaging of L4 Larvae

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fluorescence images of L4 larval animals were obtained using a laser scanning confocal microscope (LSM 710 Meta, ZEISS). The 3D images were obtained using a laser scanning confocal microscope (LSM 880 Meta, ZEISS) with airyscan. Images were processed and viewed using ZEN 2011 software (ZEISS).
+ Open protocol
+ Expand
4

Immunostaining Oocytes for Plk1 and Actin

Check if the same lab product or an alternative is used in the 5 most similar protocols
To immunostain oocytes for Plk1 or alpha-tubulin, the cells were fixed in 4% paraformaldehyde in phosphate-buffered saline (PBS) and then transferred to a membrane permeabilization solution (0.5% Triton X-100) and kept there for 1 hr. After 1 hr in blocking buffer (PBS containing 1% bovine serum albumin), the oocytes were incubated overnight at 4 °C with an anti-human Plk1 antibody (Santa Cruz Biotech, Santa Cruz, CA, USA). After three washes with PBS containing 0.1% Tween 20 and 0.01% Triton X-100, the oocytes were incubated with an Alexa Fluor 488-conjugated goat anti-mouse IgG (1:100 dilution) for 1–2 h at room temperature. For staining of the cytoplasmic actin mesh or cortical actin, the oocytes were fixed and stained with phalloidin-tetramethylrhodamine (10 μg/mL), which labels F-actin. For staining with an anti-α-tubulin-fluorescein isothiocyanate antibody (1:200 dilution), the oocytes were incubated with this reagent for 1 h, washed three times in washing buffer for 2 min each time, incubated with Hoechst 33342 (10 μg/mL in PBS) for 15 min, and then washed three times in washing buffer. The samples were mounted onto glass slides and examined under a confocal laser scanning microscope (Zeiss LSM 710 META, Jena, Germany, with a 40× water immersion objective lens).
+ Open protocol
+ Expand
5

Quantifying Mitochondrial Fission in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mitochondrial fission was analysed by staining mitochondria as we and others have described earlier with some modification 29, 30. Briefly, cells were plated onto the coverslips coated with 0.01% poly‐l‐lysine. After treatment, they were stained for 20 min. with 0.02 μM MitoTracker Red CMXRos (Molecular Probes, Eugene, OR, USA). Mitochondria were imaged using a laser scanning confocal microscope (Zeiss LSM710 META, Dublin, CA, USA). To quantitatively analyse cells with mitochondria fission, those cells with disintegrated mitochondria were taken as mitochondrial fission. The percentage of cells with fragmented mitochondria relative to the total number of cells was presented as the mean ± S.E.M. of at least three independent experiments, counted by an observer blinded to the experimental conditions. A range of 100–150 cells in 20–30 random fields were counted.
+ Open protocol
+ Expand
6

Immunofluorescence Staining of Embryos

Check if the same lab product or an alternative is used in the 5 most similar protocols
After washing three times with PBS/PVA, embryos were fixed in 3.7% paraformaldehyde for 30 min at room temperature, permeabilized with PBS/PVA containing 0.5% Triton X-100 at room temperature for 30 min, and incubated in PBS/PVA containing 1.0% bovine serum albumin at room temperature for 1 h. These embryos were incubated overnight at 4 °C with anti-LC3 (1:100; Cat #ab58610, Abcam, Cambridge, UK), anti-cytochrome c (1:100; Cat #ab110325, Abcam, Cambridge, UK), and anti-γH2A.X (1:100; Cat #2577, Ser139, Cell Signaling Technology, Danvers, MA, USA) diluted 1:100 in blocking solution. After washing three times with PBS/PVA, the embryos were incubated at room temperature for 1 h with goat anti-rabbit IgG, rabbit anti-goat IgG, or anti-mouse IgG. The oocytes and embryos were stained with 10 µg/mL Hoechst 33342 for 5 min, washed three times with PBS/PVA, mounted onto slides, and examined using a confocal microscope (Zeiss LSM 710 META). Images were processed using Zen software (version 8.0, Zeiss).
+ Open protocol
+ Expand
7

Live-cell and confocal microscopy of cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Following plating on gelatin-coated Lab-Tek I chambers, cells were maintained in phenol red-deprived DMEM-F12 (supplemented with low serum growth supplement and 10% FBS) for epifluorescence video microscopy experiments. For bright field video microscopy, cells were observed over a 30 min period using a Zeiss Axiovert 200M equipped with a Coolsnap camera (Roper Scientific, Trenton, NJ, USA). Cells were maintained at 37°C in 5% CO2 atmosphere using a temperature-controlled chamber (PECON, Erbach, Germany). Data were acquired using MetaMorph software (Roper Scientific). Timespan between image capture was 4 s. Confocal microscopy images of fixed cells were collected with a Zeiss (Oberkochen, Germany) LSM710 Meta confocal microscope using either a ×63 Plan Apochromat objective (oil immersion, 1.40 NA, DIC) at a 132 nm.pixel-1 resolution, leading to a slight XY oversampling. Optical slices were spaced by 1 μm so as to limit Z oversampling. Fluorescence filters were chosen and tested for each combination of plasmid construction and fluorescent dye so as to abolish spectral overlap. Zen software program was used to acquire images.
+ Open protocol
+ Expand
8

Fluorescent Imaging of Actin and Apoptosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
C6 cells were treated with either LOB3 (0, 20, and 30 μM) or CytoB (5 μM) for the indicated time. For confocal microscopic analysis, the cells were fixed with 4% paraformaldehyde in PBS for 10 min and permeabilized with 0.5% Triton X-100 in PBS for 10 min. The cells were next blocked with 1% BSA in PBS for 1 h, followed by incubation with Rhodamine Phalloidin reagent or the antibodies specific for F-actin and cleaved caspase-3 at 4°C overnight. The cells were then incubated with Alexa Fluor 488-or 568-conjugated secondary antibodies for 1 h. The DNA of these cells was stained with Hoechst 33342 (10 μg/mL in PBS) for 30 min, followed by washing with PBS for 5 min three times. The cells were mounted on the glass slides and imaged using a laser-scanning confocal microscope (Zeiss LSM 710 META, Oberkochen, Germany) with a 63× oil-immersion objective lens.
+ Open protocol
+ Expand
9

Immunostaining of Blastocysts for GRP78, HSF1, and Caspase3

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunostaining was conducted as previously described41 (link). After washing thrice with PBS/PVA, blastocysts were fixed with 3.7% formaldehyde at RT for 30 min. Next, blastocysts were permeabilized in 0.5% Triton X-100 for 30 min at RT, and incubated in PBS/PVA containing 3.0% BSA at RT for 1 h. Subsequently, these blastocysts were incubated overnight at 4 °C with rabbit anti-GRP78 (1:100; ab21685, Abcam, Cambridge, United Kingdom), rabbit anti-HSF1 antibody (1:100; 12972S, Cell Signaling, Danvers, MA, United States), and rabbit anti-caspase3 antibodies (1:20; 9664S, Cell Signaling). After washing thrice with PBS/PVA, the blastocysts were incubated with Alexa Fluor 488™ goat anti-rabbit IgG (1:200; A32731, Invitrogen) or Alexa Flour 546™ donkey anti-rabbit IgG (1:200; A10040, Invitrogen, Carlsbad, CA, United States) at 37 °C for 1 h. After three washes, the blastocysts were incubated for 10 min with 5 μg/mL Hoechst 33342. Finally, the blastocysts were mounted on slides and examined under a confocal microscope (LSM 710 META; Zeiss, Oberkochen, Germany). Images were processed using Zen software (v.8.0; Zeiss, Jena, Germany) and then analyzed using ImageJ v.l.44 g software (National Institutes of Health, Bethesda, MD, USA).
+ Open protocol
+ Expand
10

GFP-MAP1LC3B Transfection and H2O2 Stress

Check if the same lab product or an alternative is used in the 5 most similar protocols
IEC-6 were seeded in 24-well plates with 1 cm coverslips, and the cells were grown to 80% confluence before transient transfection with the GFP-MAP1LC3B (Beyotime Institute of Biotechnology, Shanghai, China). After 24 h cultured, the cells were treated with 200 μM H2O2 for 2 h. Finally, the cells were washed with PBS 3 times and observed under a laser-scanning confocal microscope (Zeiss LSM 710 META, Oberkochen, Germany).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!