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21 protocols using spectramax m

1

Quantifying Cell Viability with MTT Assay

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Cells were plated at 2 × 104 cells /well in 96-well plates and cultured for 24 h. MTT (Invitrogen) was added to cell culture medium to a final concentration of 250 ug/ml and incubated at 37°C in 5% CO2 incubator for 4 h. Then, the medium was removed and 100 μL of isopropanol/ 0.01 M HCl was added to solute formazan crystals. Absorbance was measured at 595 nm in a plate spectrophotometer SpectraMax M (Molecular Devices).
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2

Benzalkonium Chloride Cytotoxicity Evaluation

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We detected cell toxicity of Benzalkonium chloride with MTS assay. MTS assay is a colorimetric method for determining the number of viable cells in proliferation, cytotoxicity, or chemosensitivity. The corneal epithelial cell immortalized with K4DT expression was seeded around 80% density in a 96-well plate with 100 μl of medium. We exposed the cells to 5, 0.5, 0.05, 0.005, and 0.0005% Benzalkonium chloride solution in PBS. After the 5-min exposure to the cells, the medium was changed into basal medium and incubated at 37°C and 5% CO2 for 1 h. After the incubation, 25 μl of CellTiter 96, AQueous One Solution Cell Proliferation Assay (MTS) (Promega, Madison, WI, USA) was added to the cell culture medium, and incubated at 37°C for 1 h. The absorbance of wells at 490 nm was measured with a microplate reader (SpectraMax M, Molecular Device, San Jose, CA, USA).
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3

Hemolytic Index Determination Protocol

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The hemolytic index (HI) of the samples was determined according to the methodology proposed by Ghorpade et al.22 with modifications. Hydrogels with 1.0 cm × 1.0 cm were allowed to swell in the phosphate buffer saline for 1 h at 37 °C (n = 3). After that, PBS was removed, and 250 μL mice blood (isogenic male BALB/c adult mice, Ethical committee approved project protocol no. 22/2018) with heparin (4 UI mL−1) was added. The systems were left undisturbed for 20 min, and then, the hemolysis process was stopped by adding 1.75 mL of 0.9% NaCl saline, followed by incubation of the samples for 1 h at 37 °C. Next, the mixtures were centrifuged at 4000 rpm for 5 min, and the absorbance of the clear supernatant was measured at 545 nm using a spectrophotometer (Spectramax M, Molecular Devices). HI values were calculated according to eqn (5). where: A is the absorbance, (+) control = mixture of de 250 μL of blood and 1.75 mL double-distilled water; and (−) control = mixture of de 250 μL of blood and 1.75 mL of 0.9% NaCl saline.
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4

Evaluating PTH1-34 Effects on ATDC5 Cells

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To assess the effect of PTH1-34, ATDC5 cells were cultured in 96-well multiplates at 5 × 103cells per well, followed by incubation with different concentrations of PTH1-34 or the same volume of NS for 6 h per 24 h after cell attachment. Cell Counting Kit-8 (Dojindo, Kumamoto, Japan) was applied to measure the absorbance at day 1–6 timepoints using SpectraMaxM (Molecular Devices, San Jose, CA, United States), according to the manufacturer’s instructions.
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5

Cytokine and Nitric Oxide Quantification

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The right lungs (from the same animals used for histological study) were macerated for nitric oxide (NO) and cytokine measurements in lung tissue homogenates. NO production was evaluated according to Griess method (Green et al., 1982 (link)), and fluorescence was measured at 570 nm wavelength (SpectraMax M, Molecular Devices, San Jose, CA, United States).
Cytokine concentrations (IL-1β, IL-6, TNF-α, and TGF-β) were determined by ELISA, with a detection limit of 50 pg/mL (R&D Systems, Minneapolis, MN, United States).
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6

MTT Cell Viability Assay

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Cells were plated at 1 × 104 cells per well in 96-well plates and cultured for 24 h. 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) was added to the cell culture medium to a final concentration of 250 μg/mL and incubated at 37 °C in a 5% CO2 incubator for 4 h. Then, the medium was removed and formazan crystals were solubilized with 0.01 M HCl in isopropanol. Absorbance was measured at 595 nm in a plate spectrophotometer SpectraMax M (Molecular Devices, San Jose, CA, USA).
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7

Curcumin and Derivatives Cytotoxicity Evaluation

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Concentration–response curves were generated to determine the optimal concentration and exposure time for CUR (BIOVEA CURCUMIN bcm-95®), EXT, Me08, and Me23 (Kindly donated by Dr Mirela Sairre, Federal University of ABC, Brazil). SH-SY5Y cells were cultured in 96-well plates (5 × 104 cells/well) in 120 µl of cDMEM. Subsequently, the cells were treated with CUR at concentrations of 2.88 × 10–2 µg/mL, 1.44 × 10–1 µg/mL, 7.2 × 10–1 µg/mL, 3.6 µg/mL, 18 µg/mL, and 90 µg/mL for 24 h. EXT was used at concentrations of 1.44 × 10–1 µg/mL, 7.2 × 10–1 µg/mL, 3.6 µg/mL, 18 µg/mL, and 90 µg/mL, while Me08 and Me23 were tested at concentrations of 7.5 µM, 15 µM, 30 µM, 60 µM, and 90 µM for 24 h. After the treatment, cell viability was assessed using a colorimetric assay with 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) (Sigma-Aldrich, USA). Treated cells were incubated in 120 µl of DMEM supplemented with 10% FBS and 12 µl of 5 mg/ml MTT at 37 °C for 3 h. The formazan crystals formed were dissolved in 100 µl of dimethyl sulfoxide (DMSO). Optical density was measured at 590 nm in the spectrophotometer Spectramax M (Molecular Devices).
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8

Vemurafenib Sensitivity in KRAB-Expressing Melanoma

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A375-KRAB infected with the empty lentivirus, enhancer-inhibited A375-KRAB, SK-MEL-28-KRAB infected with the empty lentivirus, enhancer-inhibited SK-MEL-28-KRAB, SK-MEL-2-KRAB infected with the empty lentivirus, and enhancer-inhibited SK-MEL-2-KRAB cells were separately seeded 100 µl into 96-well microplates with 3000 cells per chamber, and four replicates were performed for each group. After 24 h, culture medium with 1 or 2 µM vemurafenib or no treatment was added into each chamber. Cells were further incubated for 24, 48, 60, and 72 h, and cell viability was detected using the CCK-8 Cell Counting Kit (Vazyme, A311-01) according to the manufacturer’s description. Briefly, the original culture medium in the 96-well microplates was discarded, 100 µl of 10% CCK-8-DMEM high glucose solution was added into each chamber, and then the microplates were incubated at 37 °C for 1 h. The absorbance was measured at 450 nm wave length by a microplate reader (Molecular devices, SpectraMax M). Viability was calculated as a percentage of control (A375-KRAB, SK-MEL-28-KRAB, or SK-MEL-2-KRAB cells without treatment) after background subtraction.
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9

Quantifying Plasma Biomarkers by ELISA

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Plasma levels of ST2, REG3α, VCAM1, ICAM1, and TIM3 levels were measured by ELISA according to the manufacturer’s protocol. Plasma samples were diluted (1:50 for ST2, 1:25 for TIM3, 1:10 for REG3α, 1:2000 for VCAM1 and 1:500 for ICAM1) as previously reported [18 (link),19 (link)] and in consultation with Dr. Sophie Paczesny before the start of ELISA. All biomarkers were measured simultaneously in each patient sample to avoid variation due to freeze-thaw cycles. Absorbance was measured at 450-570 nm using SpectraMax M (Molecular Devices,San Jose, CA, USA). Results were calculated from a 4-parametric logistic curve fit generated using the standards of respective biomarkers. Protein concentrations from individual samples were estimated according to the final dilution factors. ELISAs were performed by investigators who were blinded to all clinical information including transplantation outcomes.
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10

Evaluating Oxidative Stress Protection

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Metabolic activity was assessed as a measure of viability using a commercial reagent MTS (CellTiter 96® AQueous One Solution Assay, Promega, WI, USA). Cells in 96-well tissue culture plates (1 × 104 cells/well) were exposed to 100 μL of 100 μM HOCl or 100 μM HOCl containing SCN, SeCN or SeMet (10–400 μM) for 15 min. After incubation, the treatment solution was aspirated and the cells were washed with warm HBSS. The metabolic activity was measured directly after treatment or following the re-culture of the cells in growth medium for 24 h. Cells were incubated with cell growth medium (100 μL) containing MTS reagent (10 μL), for 4 h at 37 °C, before measuring the change in absorbance at 490 nm, using a microplate reader (Spectra Max M, Molecular Devices, San Jose, CA, USA). Experiments were also performed with SeCN and SeMet (25–1000 μM), and HOSeCN (0–100 μM).
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