The largest database of trusted experimental protocols

21 protocols using tecnai 12 biotwin electron microscope

1

Electron Microscopy of Extracellular Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
EVs were deposited on Formvar-carbon coated grids (TED Pella, Mountains Lake, CA, USA), after 1 min of adsorption the excess was removed with absorbent paper and contrasted with uranyl acetate pH 7.0 for 1 min, excess was removed and dried for 5 min at 60 °C. The specimens were observed using a Philips Tecnai 12 BioTWIN electron microscope (FEI) at 80 kV (Unidad de microscopia avanzada UC (UMA), Pontificia Universidad Católica de Chile, Santiago, Chile). Immunogold labeling was performed as follows: EVs were adsorbed as described above on Formvar-carbon coated grids, and permeabilized with 0.1% saponin, rinsed in PBS, and blocked with 0.5% of BSA. Grids were then incubated with mouse anti-Cx46 antibodies (Santa Cruz Biotechnology, USA), rinsed with PBS, and labeled with a secondary antibody conjugated to 10 nm gold particles (Abcam, Cambridge, UK). Specimens were contrasted and observed as described above using a Philips Tecnai 12 BioTWIN electron microscope (FEI) at 80 kV.
+ Open protocol
+ Expand
2

Ultrastructural Analysis of Mitochondria

Check if the same lab product or an alternative is used in the 5 most similar protocols
The mice (n = 4/group) were anesthetized and perfused (4% paraformaldehyde, 0.1% glutaraldehyde, and 15% picric acid in phosphate buffer [PB]), and their brains were processed for electron microscopic analysis. Ultrathin sections were cut on a Leica Ultramicrotome, collected on Formvar-coated single-slot grids, and analyzed with a Tecnai 12 BioTWIN electron microscope (FEI). Analysis of mitochondria (area, coverage, density, and contact with the endoplasmic reticulum [ER]) was performed in an unbiased fashion, as previously described (21 (link),22 (link)).
+ Open protocol
+ Expand
3

Ultrastructural Analysis of SCR and PC2 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
SCR and PC2 KD cells were plated on glass coverslips and allowed to grow to 90% confluency before fixing with 4% glutaraldehyde. Cells were incubated in 1% osmium tetroxide and dehydrated in increasing ethanol concentrations, then embedded in Durcupan resin. Ultrathin sections were cut on a Leica Ultra-Microtome, collected on Formvar-coated single-slot grids, and analyzed with a Tecnai 12 Biotwin electron microscope (FEI, Hillsboro, OR). The investigator collecting the TEM images was blinded to the identity of the samples.
+ Open protocol
+ Expand
4

Ultrastructural Analysis of SARS-CoV-2 Infection

Check if the same lab product or an alternative is used in the 5 most similar protocols
Huh 7.5 cells infected with SARS-CoV-2 were analyzed at different time points (12, 24 and 48 h.p.i.), and HBECs samples were from Wei et al., 2021. The samples were prepared in the following way: HBECs were fixed using 2.5% glutaraldehyde in 100 mM phosphate buffer, osmicated in 1% osmium tetroxide, and dehydrated in ethanol. During dehydration, 1% uranyl acetate was added to the 70% ethanol to enhance ultrastructural membrane contrast. After dehydration the cells were embedded in Durcupan and ultrathin sections were cut on a Leica Ultra-Microtome, collected on Formvar-coated single-slot grids, and analyzed with a Tecnai 12 Biotwin electron microscope (FEI). ImageJ software was used to measure mitochondrial area.
+ Open protocol
+ Expand
5

Ultrastructural Analysis of GRASP55 Knockout

Check if the same lab product or an alternative is used in the 5 most similar protocols
Briefly, control and GRASP55 knockout cells were grown in 35 mm plastic dishes to 80% confluence. Cells were then fixed with 1% Glutaraldehyde (Electron Microscopy Sciences) in 0.2 M HEPES pH 7.3 at RT for 1 h. The fixative was replaced with 1% BSA in PBS, and cells were carefully detached using a plastic cell scraper, collected into microfuge tubes, and centrifuged to obtain the pellet. All samples were then washed three times in 0.2 M HEPES pH 7.3 and post‐fixed 30 min in 1% Osmium Tetroxide in the dark at 4°C in the same buffer. They were then washed three times in distilled water and post‐fixed 25 min in 1% Osmium Tetroxide and 1.5% Potassium Ferrocyanide in the dark at room temperature in HEPES 0.2 M pH 7.3. After washing three times in distilled water, they were stained with 0.5% uranyl acetate over night at 4°C. The pellets were dehydrated in graded steps of ethanol (50, 70, 90, and 100%), 2 times with 100% of acetone, and embedded into Epon. Thin sections (60 nm) were cut on a Leica UC7 ultramicrotome and examined with 120 kV Philips Tecnai 12 Biotwin electron microscope (FEI, Eindhoven, The Netherlands) using a VELETA digital camera.
+ Open protocol
+ Expand
6

Ultrastructural Visualization of Kv3.3 in Cerebellum

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mice (8 weeks old) were anaesthetized and transcardially perfused with 4% PFA and 0.1% glutaraldehyde. After post-fixation overnight, vibratome sections (50 μm) containing the cerebellum were washed and then then immunostained for Kv3.3 for 48h at 4°C using an anti-Kv3.3 antibody raised in rabbit (Alomone labs, APC-102). The sections were then incubated with biotinylated goat anti-rabbit secondary antibodies (Vector, 1:250) for 1.5h at room temperature followed by incubation in Avidin biotin-peroxidase (Vector, 1:200) for 1.5h at room temperature. Immunoreactivity was then visualized with a diaminobenzidine (DAB)/glucose oxidase reaction (Shu et al., 1988 (link)). The sections were then osmicated (15 min in 1% osmium tetroxide) and dehydrated in increasing ethanol concentrations. During the dehydration, 1% uranyl acetate was added to the 70% ethanol to enhance ultrastructural membrane contrast. Flat embedding in Durcupan followed dehydration. Ultrathin sections were cut on a Leica ultramicrotome, collected on Formvar-coated single-slot grids, and analyzed with a Tecnai 12 Biotwin electron microscope (FEI).
+ Open protocol
+ Expand
7

Electron Microscopy Sample Preparation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells were fixed using 2.5% glutaraldehyde in 0.1 M phosphate buffer, osmicated in 1% osmium tetroxide, and dehydrated in increasing ethanol concentrations. During dehydration, 1% uranyl acetate was added to the 70% ethanol to enhance ultrastructural membrane contrast. After dehydration the cells were embedded in Durcupan. 70 nm ultrathin sections were cut on a Leica ultramicrotome, collected on Formvar coated single-slot grids, and analyzed with a Tecnai 12 Biotwin electron microscope (FEI).
+ Open protocol
+ Expand
8

Structural Analysis of Human Dicer-miRNA Complexes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human Dicer-RNA complexes were assembled by pre-incubating 150 nmol/L hDicer with a 500% excess of unedited and edited pre-miR-151 in a specific volume containing 20 mmol/L Tris-HCl, pH 6.8, 25 mmol/L NaCl, 2 mmol/L MgCl2, 1 mmol/L DTT and 2 mmol/L EDTA and 5% glycerol. All the samples were negatively stained on holey carbon grids covered by a thin layer of continuous carbon over holes with 2% (w/v) uranyl acetate solution. All micrographs were collected on a Tecnai F20 Twin transmission electron microscope (FEI) running at 200 kV or an Tecnai-12 Biotwin electron microscope (FEI) operated at 120 kV, using a nominal magnification of 50,000× or 49,000×, respectively. The micrographs were collected on Ultrascan 4000 CCD camera (Gatan Inc.) at specimen-level pixel sizes of 0.223 nm or 0.29 nm, respectively, using a dose of ~30 e Å−2 and a nominal defocus range of −1 to −3 μm.
+ Open protocol
+ Expand
9

Ultrastructural Analysis of POMC Neurons

Check if the same lab product or an alternative is used in the 5 most similar protocols
Under deep anesthesia, three-month-old male mice were perfused (4% paraformaldehyde, 0.1% glutaraldehyde, and 15% picric acid in phosphate buffer), and their brains were processed for immunolabeling for electron microscopy studies. Ultrathin sections were cut on a Leica Ultra-Microtome, collected on Formvar-coated single-slot grids, and analyzed with a Tecnai 12 Biotwin electron microscope (FEI). The electron microscopy photographs (×11,500) were used to measure astrocytic coverage and number of synapses on perikaryal membrane of POMC and unlabeled neurons. The analysis of synapse number was performed in an unbiased fashion as described elsewhere3 (link),20 . The analysis of the astrocytic coverage was performed as described previous reports5 (link),6 (link). All investigators were blinded to the experimental groups during the entire procedure.
+ Open protocol
+ Expand
10

Ultrastructural Analysis of Mitochondria

Check if the same lab product or an alternative is used in the 5 most similar protocols
Electron microscopic analysis of mitochondria was performed as above and previously described (Dietrich et al., 2012 (link)). Briefly, YFP-positive cortical PNs were immunolabeled with primary and secondary antibodies, and then visualized with glucose oxidase-DAB. Stained sections were further processed before ultrathin sectioning, placing in Formvar-coated single-slot grids, and analyzed with a Tecnai 12 Biotwin electron microscope (FEI). We analyzed five WT mice and six KO mice, aged 2 months, and five cells from each mouse. Measurements of mitochondria were performed using ImageJ.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!