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9 protocols using free cholesterol e

1

Hepatic Lipid Quantification and Metabolic Markers

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Hepatic lipids were isolated as described previously.22 Total cholesterol, free cholesterol, triglycerides (TG) and free fatty acids were measured using Cholesterol E (catalog number 439‐17501), Free Cholesterol E (435‐35801), Triglyceride E (432‐40201) and Non‐Esterified Fatty Acid C (279‐75401) kits, respectively, according to manufacturer (Wako Pure Chemical Industries, Osaka, Japan) instructions. Serum glutamate‐pyruvate transaminase (GPT) levels were measured using a Transaminase CII Kit (431‐30901) according to manufacturer (Wako Pure Chemical Industries) instructions. Blood glucose was measured using an ACCU‐CHEK glucometer (Roche Diagnostics). Serum levels of insulin and VEGF were measured using enzyme‐linked immunosorbent assay kits (AKRIN‐031 and BMS619/2, respectively) according to manufacturer (Shibayagi, Gunma, Japan; eBioscience, San Diego, CA, USA) instructions.
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2

Quantifying Plasma Lipid Profiles

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Plasma was prepared by microcentrifugation from heparinized blood. Total cholesterol (Cholesterol Infinity, Thermo Fisher Scientific, Ottawa, ON, Canada), unesterified cholesterol (Free Cholesterol E, WAKO Diagnostics, Mountain View, CA, United States), HDL cholesterol (HDL Cholesterol E, WAKO Diagnostics, Mountain View, CA, United States) and Triglyceride (L-Type Triglyceride M, WAKO Chemicals, Richmond, VA, United States) were measured using the indicated commercial assay kits and following manufacturers’ instructions. The HDL Cholesterol E kit uses phosphotungstate-magnesium to precipitate lipoproteins other than normal HDL (Durrington, 1980 (link)). Therefore, the cholesterol detected after precipitation is referred to as (non-precipitable) HDL cholesterol. Non-HDL cholesterol was calculated as total cholesterol—(non-precipitable) HDL cholesterol.
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3

Enzymatic Determination of Lipid Profiles

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Hepatic TAG, total cholesterol and non-esterified cholesterol were enzymically determined using commercial kits (Triglyceride-SL, Genzyme Diagnostics PEI Inc.; Cholesterol E and Free Cholesterol E, Wako Chemicals) following manufacturers’ protocols.
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4

Cholesterol Quantification in Mice

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Mice were euthanized by CO2 inhalation and blood was collected by cardiac puncture. Serum was collected by centrifugation (15 min, 2000 g, 4°C) after allowing blood to clot on ice. Plasma was collected by centrifugation (15 min, 2000 g, 4°C) in EDTA-treated tubes (Sarstedt, Numbrecht, Germany). All serum and plasma samples were snap frozen and stored at −80°C. Kits were used to measure total cholesterol (Infinity Total Cholesterol, Fisher Scientific), free cholesterol (Free Cholesterol E, Wako Diagnostics, Richmond, VA), HDL cholesterol (HDL-C E, Wako Diagnostics), LDL cholesterol (LDL-C Reagent L-type, Wako Diagnostics), NEFAs [HR Series NEFA-HR(2), Wako Diagnostics], and TGs (Infinity Triglycerides, Fisher Scientific) according to the manufacturer's directions. For HFD and LFD male mice, n=5-8; for HFD and LFD female mice, n=8-9; and for CD male mice, n=6-8.
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5

Lipid Profiling in Plasma Samples

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Total cholesterol, free cholesterol, triglycerides and HDL cholesterol in plasma were measured using enzymatic assay kits according to the manufacturer’s protocols (total cholesterol: Infinity Cholesterol, Thermo Fisher Scientific, Ottawa, ON, Canada; free cholesterol: Free Cholesterol E, Wako Diagnostics, Mountain View, CA, USA; triglycerides: l-type triglyceride M, Wako Chemicals, Richmond, VA, USA; HDL cholesterol: HDL-cholesterol E, Wako diagnostics, Mountain View, CA, USA). Non-HDL cholesterol was calculated as the difference between total cholesterol and HDL cholesterol measurements. Cholesteryl ester levels were calculated as the difference between total cholesterol and free cholesterol measurements for each sample. For lipoprotein total cholesterol profiles, plasma was separated by size by gel filtration chromatography using a Tricorn Superose 6 HR 10/300 column on an AKTA fast protein liquid chromatography system (GE Healthcare Life Sciences, Mississauga, ON, Canada), and total cholesterol was measured in each fraction as previously described [58 (link),59 (link)].
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6

Comprehensive Liver Lipid Extraction

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Total lipids were extracted from a large portion of the liver comprising all 4 lobes missing a small section of the left lateral lobe that was used for other analyses. The liver was ground with a tissue grinder into a homogenous slurry and ~300 mg of slurry (weighed accurately) was homogenized in 5 mL of chloroform:methanol (2:1, v/v). The samples were incubated overnight on a shaker, centrifuged (10 min, 2000 × g) and the supernatant was collected. Sodium chloride (0.9%, w/v) was added to the supernatant and the organic solvent layer was recovered and evaporated under nitrogen to obtain the weight of total lipids. For determination of TC, free cholesterol and triglyceride concentrations, total lipids were extracted from an ~300 mg section (weighed accurately) of the left lateral lobe as described above. Total lipids were weighed and re-suspended in 1.5 mL of 10% Triton X-100 in isopropanol. TC, free cholesterol and triglycerides were measured using Wako Cholesterol E (999–02601, Wako Chemicals, Richmond, VA, USA), Free Cholesterol E (993–02501, Wako Chemicals) and L-Type Triglyceride M (Wako Chemicals) kits, respectively.
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7

Quantifying Free Cholesterol in Healthy and FLD Subjects

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Blood was drawn from 20 healthy volunteers (mean age: 43.9 ± 15.6 years old; Male: Female = 9:11) with normal lipids [Total cholesterol: 162.8 ± 19.3 mg/dL (mean ± SD)] or from patients diagnosed with FLD. Plasma samples were obtained by centrifugation at 2,000 × g for 10 minutes at 4°C and stored at −80°C until use. Free cholesterol was measured using Free Cholesterol E (Wako Pure Chemicals, Osaka, Japan). The study was approved by the IRB at the National Heart, Lung, and Blood Institute.
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8

Comprehensive Protein and Lipid Analysis

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Protein concentrations were measured using DC Protein Assay Kit II (Bio-Rad). Phospholipid and total and free cholesterol levels were evaluated enzymatically (LabAssay Phospholipid, LabAssay Cholesterol, and Free Cholesterol E; Wako Diagnostics). Preβ1-HDL was measured using ELISA kit (Sekisui/American Diagnostica GmbH) according to the manufacturer’s recommendations.
Protein conjugate analysis by size exclusion chromatography coupled to multiple angle light scattering was performed as described in the Data Supplement. Data collection and analysis were performed in the ASTRA software using ASTRA’s Protein Conjugate Analysis method.32 The differential refractive index increments (dn/dc) of 0.185, 0.150, and 0.130 were used for molar mass determination of apo AI, phosphatidylcholine and mixture of mammalian lipids, respectively.33 (link),34 (link)
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9

Comprehensive HDL Composition Analysis

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HDL chemical composition was measured using commercially available enzymatic kits, in the microplate reader Power Wave XS (BioTek®, Winooski, USA). Total proteins (Pierce™ BCA Protein Assay Kit, Thermo Scientific, Rockford, USA), TC (CHOD-PAP, total cholesterol, Roche Diagnostics® reagents, Mannheim, Germany), FC (Free Cholesterol E, Wako Chemicals, Richmond, USA), PL (Phospholipids C, Wako Chemicals, Richmond, USA), TG (TG, GPO-PAP, Roche Diagnostics® reagents, Mannheim, Germany) and ApoA-I (TINA QUANT APOA1 V2, Roche Diagnostics® reagents, Mannheim, Germany) were measured, while CE was calculated according to the following formula: (TC-FC) x 1.67 [12] . The relative content of ApoA-I (HDL-ApoA-I) or lipids in HDL was calculated based on their proportion to the total mass of HDL, calculated as the sum of FC, PL, TG, CE, and total proteins. HDL molar concentration was estimated based on particle total mass and molecular weight [12] .
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