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9 protocols using anhydrous sodium sulphate

1

Chloroform Extraction and Derivatization for GC-MS Analysis

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Samples were non-derivatized and derivatized for the GC-MS analysis. For derivatized samples, the preparation prior to GC-MS analysis was performed according to Semreen [18 (link)] methodology as follows: 30 mL from cell-free supernatants were extracted three times with 90 mL of chloroform (Fisher Scientific, Santa Clara, CA, USA). The chloroform layer was dehydrated over anhydrous sodium sulphate (Fisher Scientific), filtered, and followed by evaporation using a rotatory evaporator (Buchi, Essen, Germany). The residue collected from each extract was dissolved in 500 μL of chloroform prior to GC-MS injection. In addition, 100 µL of the chloroform extract was derivatized by adding 50 μL of N-trimethylsilyl-N-methyl trifluoroacetamide and trimethylchlorosilane (MSTFA + 1% TMS) followed by incubation at 50 °C for 30 min prior to GC-MS injection.
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2

Biomaterial for Stem Cell Differentiation

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Poly(ethylene glycol) (PEG; Mn 2000 Da and 3350 Da), acryloyl chloride, cystamine dihydrochloride, L-cysteine (Cys), reduced glutathione (GSH), calcium hydride, dexamethasone, β-glycerophosphate, ascorbic acid, indomethacin, isobutyl methylxanthine, insulin, pyridine, activated charcoal, and Sephadex G-25 were purchased from Sigma-Aldrich (USA). The disuccinimidyl carbonate was obtained from Acros Organics (USA). Dulbecco’s modified eagle medium (DMEM; high glucose) was purchased from Hyclone. Fetal bovine serum (FBS), penicillin, and streptomycin were purchased from Gibco. Anhydrous Dichloromethane (DCM), acetonitrile, anhydrous diethyl ether, dithiothreitol (DTT), tris (2-carboxyethyl) phosphine (TCEP), potassium bicarbonate (K2CO3), potassium iodide (KI), hydrochloric acid (HCl), anhydrous sodium sulphate, sodium chloride (NaCl) and Celite 545 were purchased from Fisher Scientific. DCM and acetonitrile were dried using calcium hydride. Irgacure (D2959) was procured from Ciba, Switzerland. CellTracker Red (CMTPX) and Live/Dead assay kit were obtained from Life Technologies.
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3

Functionalization of 4APEG-NH2 for Biomaterials

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All chemicals and reagents were of reagent grade and were supplied by Sigma Aldrich, Poole, UK, unless otherwise indicated. 4APEG-NH2 [Tetra-O,O,O,O-poly(ethyleneglycol-O-2- ethyleneimine), 2000 Da] was supplied by Jenkem Technology, Plano, TX, USA. Triethylamine (TEA) and anhydrous sodium sulphate were supplied by Fisher scientific, Loughborough, UK. Hydrochloric acid (HCl) was supplied by VWR International, Poole, UK. Deuterium oxide (D2O) was supplied from Goss Scientific, Crewe, UK, and dialysis membrane (molecular weight cut off = 1 kDa) was supplied from Spectrum Chemical Manufacturing Corporation, New Brunswick, NJ, USA.
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4

Candida Metabolite Extraction and GC-MS Analysis

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The filtered supernatants collected separately from each Candida isolate was extracted with chloroform (Fisher Scientific, Santa Clara, CA, USA). The chloroform layer was dehydrated over anhydrous sodium sulphate (Fisher Scientific) followed by evaporation using rotatory evaporator (Buchi, Essen, Germany). The residue collected from each extracted culture was dissolved in 500 µL chloroform prior to GC-MS injection. Furthermore, 100 µL of the chloroform extract was derivatized by adding 50 µL of N-trimethylsilyl-N-methyl trifluoroacetamide and trimethylchlorosilane (MSTFA + 1% TMS) followed by incubation at 50 °C for 30 min prior to GC-MS analysis.
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5

Quantification of Lipophilic Vitamins

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Retinyl acetate, retinyl palmitate, β-carotene, methyl tert-butyl ether (MTBE), α-tocopherol and γ-tocopherol were obtained from Sigma Aldrich (Poole, UK). The reference material (ERM -BD600) was purchased from the Institute for Reference Materials and Measurements for Certified Reference materials (Geel, Belgium). HPLC-grade iso-hexane, ethyl acetate, absolute ethanol, methanol, tetrahydrofuran (THF), and laboratory reagent grade sodium chloride (NaCl), petroleum ether (PE) (bp 40-60°C) and anhydrous sodium sulphate were obtained from Fisher Scientific (Loughborough, UK).
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6

Synthesis and Characterization of Phenolic Compounds

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Gallic acid monohydrate (ACS), 3,4,5‐trimethoxyphenol (>98.5%), ascorbic acid (99%) and sodium nitrate (extra pure) were purchased from Acros Organics; 3,4‐dihydroxybenzoic acid (97%) from Alfa Aesar; acetonitrile (>99.9%), ethyl acetate (>99.8%), diethyl ether (>99.5%) and methanol (>99.8%) from Fisher Chemical; sodium hydroxide (>98%) from José Manuel Gomes dos Santos; anhydrous sodium sulphate (99%), boron tribromide solution in anhydrous dichloromethane and anhydrous dichloromethane (99.7%) from Thermo Scientific; agar and resorcinol (99%) from Panreac; all other chemicals of the highest grade from Sigma‐Aldrich/Merck.
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7

Analysis of Coccidiostats in Animal Feeds

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Coccidiostats: maduramycin ammonium, narasin, salinomycin sodium salt, monensin sodium salt, lasalocid A sodium salt, robenidine hydrochloride, dinitrocarbanilide (marker for nicarbazin) and nigericin sodium salt were purchased from Sigma-Aldrich (St. Louis, MO, USA). The feed samples were kindly provided by the National Feed Laboratory in Lublin. Anhydrous sodium sulphate and magnesium sulphate were purchased from Alfa Aesar (Thermo Fischer, GmbH, Germany). 500 mg SPE columns (6 ml volume, Bakerbond spe WP-CBX) were provided by Avantor (Gliwice, Poland). HPTLC plates Silica gel 60 F254 and 98% formic acid solution were supplied by Merck (Darmstadt, Germany). Acetonitrile and methanol (both MS purity) were purchased from Biosolve Chemie (Dieuze, France), while for SFPE experiments: acetonitrile, methanol and toluene (all MS purity) were provided by POCH (Gliwice, Poland).
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8

Quantitative Analysis of Antibiotic Compounds

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Azithromycin dihydrate and colistin sulphate were purchased from Beta Pharma (Beta Pharma (Shanghai) Co. Ltd, Wujiang City, China). Acetonitrile (HPLC grade) was purchased from Merck (Fair Lawn, New Jersey, USA). Sodium sulphate anhydrous was purchased from Fisher Chemicals (Fair Lawn, New Jersey, USA). Potassium phosphate dibasic trihydrate was purchased from VWR Chemicals (Solon, Ohio, USA).
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9

Alginate Extraction and Characterization

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Sodium alginate from Laminaria hyperborea and potassium ferricyanide were obtained from BDH Laboratory Supplies (England). Ammonium molybdate, ethanol, ferric chloride, phenol, sodium chloride, sodium sulphate anhydrous, sulfamic acid, trichloroacetic acid and Trolox were purchased from Fisher Scientific (Ireland). D-mannuronic acid and L-guluronic acid were purchased from Carbosynth (UK). Vivinal GOS was a gift from Dr. Shane O'Connell (Institute of Technology Tralee, Ireland). All other reagents were obtained from Sigma-Aldrich (Ireland). Bacterial cultures were purchased from DSMZ (Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, Germany) and from the NCIMB (National Collection of Industrial, Food and Marine Bacteria, UK).
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