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4 protocols using anti cd44 percp

1

Phenotypic Characterization of Splenic T Cells in Sepsis

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Mice were sacrificed and spleens were harvested 24-hours post CLP. Splenocytes were stained with anti-CD3-Alexa 700 (BD), anti-CD4-PB (BD), anti-CD8-PO and anti-CD44-PerCP (Biolegend). Cells were also surface stained with anti-CD25-FITC (Biolegend), anti-CD69-PE (Biolegend), anti-CD62L-PE Cy7 (BD), and anti-BTLA-PE, anti-2B4-APC, anti-PD-1-APC-Cy7, anti-LAG-3-FITC (all from eBioscience) for phenotypic analysis. An LSR II flow cytometer (BD Biosciences) was used to run all samples. Accucheck Counting Beads (Thermo Fisher Scientific) were added during staining to calculate the absolute number of T cells per spleen. Flow data were analyzed using FlowJo software (FlowJo, LLC) and SPADE (Cytobank.org) (see below).
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2

Comprehensive Immune Cell Profiling in Sepsis

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Mice were sacrificed and spleens were harvested at 24h after CLP. Splenocytes were stained with anti-CD3-Alexa 700 (BD), anti-CD4-PB (Biolegend, clone RM4–5), anti-CD8-PO (Invitrogen, clone MCD0830), anti-CD44-PerCP (Biolegend, clone IM7), anti-CD62L-PE (BD), anti-CD28-PE-Cy7 (Biolegend, clone E18) and anti-CD25-APC-Cy7 (BD). For detection of cell apoptosis, splenocytes were stained with a FITC Annexin V apoptosis detection kit with 7-AAD (Biolegend). Anti-Bcl-xL (54H6) and Bcl-2 (Biolegend, clone BCL/10C4) were used to detect engagement of the mitochondrial pathway of apoptosis while anti-CD95 (Biolegend, clone DX2) and anti-TNFR Type Ⅰ (Biolegend, clone 55R-286) were stained to detect expression of death receptors on T cells. Cells were intracellularly stained with anti-Ki-67 (Biolegend, clone 16A8) to assay for cell proliferation. Tregs were identified via intracellular staining for Foxp3-FITC (Ebioscience, clone FJK-16S) using the Foxp3 staining kit (Ebioscience). B cells were stained with anti-CD19-FITC (Biolegend). NK cells were stained with anti-NK1.1-PE (Ebioscience). Dendritic cells were stained with anti-CD11c-PE-Cy7 (BD). Neutrophils were stained with anti-Gr-1-Alexa 700 (Biolegend) and anti-CD11b-PerCP (Biolegend). Accucheck Counting Beads (Thermo Fisher Scientific) were added after staining to calculate the absolute number of cells per spleen.
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Multiparametric Flow Cytometry of Adipose-derived Cells

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Primary cells obtained after the enzymatic digestion of periaorta adipose tissue or cultured cells detached with scraptase (GenDEPOT) were stained for 30 minutes at 4°C with following antibodies: anti-CD45-APC (BD Biosciences, 561018), anti-CD29-PE (BD Biosciences, 562801), anti-Sca-1 (stem cell antigen 1)-PE-Cy7 (Biolegend, 108113), anti-CD31-PerCP (Biolegend, 201419), anti-CDH5-Alexa Fluor 647 (BD Biosciences, 562242), anti-PDGFRα-APC (platelet-derived growth factor α; eBioscience, 17-1401-81), anti-CD117-PE (Biolegend, 105807), anti-CD34-APC (Biolegend, 128611), anti-CD44-PerCP (Biolegend, 103035), and anti-CD11b-PE (Biolegend, 101205). Nucleated cells were distinguished from debris with Syto16 (Molecular Probes, S7578) and dead cells with 4′,6-diamidino-2-phenylindole (DAPI). Cells were analyzed with BD Accuri C6 or BD LSR Fortessa II (both Becton Dickinson). Gating was set with appropriate fluorescence minus one controls or corresponding IgG controls.
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4

Multiparametric Flow Cytometry of Adipose-derived Cells

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Primary cells obtained after the enzymatic digestion of periaorta adipose tissue or cultured cells detached with scraptase (GenDEPOT) were stained for 30 minutes at 4°C with following antibodies: anti-CD45-APC (BD Biosciences, 561018), anti-CD29-PE (BD Biosciences, 562801), anti-Sca-1 (stem cell antigen 1)-PE-Cy7 (Biolegend, 108113), anti-CD31-PerCP (Biolegend, 201419), anti-CDH5-Alexa Fluor 647 (BD Biosciences, 562242), anti-PDGFRα-APC (platelet-derived growth factor α; eBioscience, 17-1401-81), anti-CD117-PE (Biolegend, 105807), anti-CD34-APC (Biolegend, 128611), anti-CD44-PerCP (Biolegend, 103035), and anti-CD11b-PE (Biolegend, 101205). Nucleated cells were distinguished from debris with Syto16 (Molecular Probes, S7578) and dead cells with 4′,6-diamidino-2-phenylindole (DAPI). Cells were analyzed with BD Accuri C6 or BD LSR Fortessa II (both Becton Dickinson). Gating was set with appropriate fluorescence minus one controls or corresponding IgG controls.
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