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7 protocols using regulatory t cell isolation kit 2

1

Regulatory T Cell Suppression Assay

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CD4+CD25+CD127dim/- regulatory T cells will be separated from responder T cells by magnetic-activated cell sorting using a CD4+CD25+CD127dim/- Regulatory T Cell Isolation Kit II (Miltenyi Biotec). Responder T cells will be labelled with 5 μM carboxyfluorescein succinimidyl ester (CFSE; Invitrogen) according to the manufacturer’s instructions. Afterwards regulatory T cells and CFSE+ responder T cells will be cocultured at a ratio of 1:2 and 1:1. Cultures will be stimulated with anti-human CD3 (OKT3; 2 μg/ml) and soluble mouse anti-human CD28 (1 μg/ml; eBioscience) for 4 days. Proliferation will be assessed by flow cytometry after stimulation.
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Inductive and Suppressive Assays for Regulatory T Cells

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Inductive assay: The CFSE labeled PBMCs were stimulated and induced by human CD3/CD28 T cell activator (Stem Cell, Canada) at a dose of 25 µL/mL, IL-2 (Pepro Tech, USA) at a dose of 150 ng/mL and TGF-β (Pepro Tech, USA) at a dose of 5 ng/mL for up to 3 d in 37 °C, 5% CO2 incubator, and then analyzed by fluorescence-activated cell sorting (FACS).
Supressive assays: The CFSE labeled PBMCs were cocultured with the Tregs isolated by Regulatory T Cell Isolation Kit II(Miltenyi Biotec, Germany) at the ratio of 1:0, 2:1 respectively and stimulated with human CD3/CD28 T cell activator (Stem Cell, Canada) at a dose of 25 µL/mL for 4 d in 37 °C, 5% CO2 incubator, and then analyzed by fluorescence-activated cell sorting (FACS).
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Isolation of Human Regulatory T Cells

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Treg cells were isolated by magnetic sorting from PBMCs using a two-step procedure using a Regulatory T Cell Isolation Kit II (Miltenyi Biotech, Tokyo, Japan) according to the manufacturer’s protocol. Briefly, cells were incubated with a cocktail of biotinylated antibodies and Anti-Biotin MicroBeads for the depletion of non-CD4+ and CD127high cells. Then, the flow-through fraction of pre-enriched CD4+CD127dim/− T cells was incubated with CD25 MicroBeads for subsequent positive selection of CD4+CD25+CD127dim/− Treg cells. LD and MS Columns (Miltenyi Biotech) were used during the first (depletion) and second (positive selection) magnetic separations, respectively. Then, cells were washed in MACS buffer, centrifuged for 10 min at 350× g, and frozen at −80 °C until RNA isolation.
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4

Isolation and Characterization of Human Regulatory T Cells

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Human PBMC were purified from healthy blood donors by density gradient centrifugation at 2000 rpm for 20 min with Biocoll Separating Solution (Biochrom, Darmstadt, Germany). Erythrolysis was performed after which the cell suspension was passed through a 0.45 mm filter (BD, Franklin Lakes, NJ, USA). Human Treg (CD4 + CD25 + CD127dim/- cells) were obtained from freshly isolated PBMC by magnetic-activated cell sorting (MACS) using a CD4 + CD25 + CD127dim/- Regulatory T-cell Isolation Kit II (Miltenyi Biotec, Bergisch Gladbach, Germany) according to the manufacturer`s protocol in a two-step isolation. Firstly, non-CD4 + and CD127high cells were removed by negative magnetic selection and, secondly, CD25 + cells were collected using CD25 positive selection magnetic beads. Purity of the isolation was confirmed by flow cytometry and found to be around at 75% SD (Supplement 2). Next, the cells were labelled with CD4-PE, CD127-APC, CD25-FITC, CD19-PacBlue and CD3-APC (all BioLegend, San Diego, CA, USA). Intracellular staining for FoxP3 was performed using a PacBlue anti-human FoxP3 Antibody and FoxP3 Fix/Perm Buffer Set (BioLegend, San Diego, CA, USA) following the manufacturer’s protocol. To check the quality of the isolation, a Zombie NIR Fixable Viability Kit (BioLegend, San Diego, CA, USA) was added once after which a viability over 90% was found in each isolation fraction.
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5

Isolation of Naive and Memory Tregs

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To examine the suppressive activity of CD45RA+ naive Tregs and CD45RA memory Tregs, blood samples (50 ml) from 40 healthy controls and 37 SLE patients were collected in EDTA-containing tubes. Ficoll-Hypaque (inno-train Diagnostik GmbH) density gradient centrifugation was used to separate the PBMCs. The “Regulatory-T-cell Isolation Kit II” (Miltenyi Biotec, Bergisch Gladbach, Germany) was used to purify CD4+CD127low+/–CD25+ Tregs according to the manufacturer’s instructions. First, CD4+CD127low+/− T cells were isolated by magnetic depletion of non-CD4+CD127high+ T cells. In the second step, the CD4+CD127low+/–CD25+ Tregs were isolated by positive selection over two consecutive columns. The CD4+CD127low+/–CD25 T cells were obtained in the flow-through fraction and used as Tresps. The CD4+CD127low+/–CD25+ Tregs were subsequently retrieved from the columns.
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6

Regulatory T Cell Suppression Assay

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CD4+CD25+CD127dim/− regulatory T cells will be separated from responder T cells by magnetic-activated cell sorting using a CD4+CD25+CD127dim/− Regulatory T Cell Isolation Kit II (Miltenyi Biotec). Responder T cells will be labeled with 5 μM carboxyfluorescein succinimidyl ester (CFSE; Invitrogen) according to the manufacturer’s instructions. Afterwards regulatory T cells and CFSE+ responder T cells will be cocultured at a ratio of 1:2 and 1:1, respectively. Cultures will be stimulated with anti-human CD3 (2 μg/ml; OKT3) and soluble mouse anti-human CD28 (1 μg/ml; eBioscience) for 4 days. After the stimulation period proliferation will be assessed by flow cytometry.
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7

Isolation of Tregs from Beta-TM Patients

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Thirty milliliters of peripheral blood from 5 patients with beta-TM, awaiting HSCT, and 4 age-matched healthy controls (HCs) with a mean age of 8 ± 3 years (mean ± SD) were obtained. A consent form was obtained for all participants, which was signed by the patient's parents before receiving peripheral blood.
Collection of PBMC and Isolation of CD4 + CD25 + CD127 dim/- Tregs Blood samples were centrifuged on Ficoll-Hypaque gradients (Histosep, Iran). Similar numbers of PBMC were isolated from beta-TM patients and HCs (7,200 × 10 4 ± 0.89 vs. 7,800 × 10 4 ± 0.691, respectively; p-value = 0.61) followed by washing in PBS (Invitrogen, USA). Cell viability was assessed using trypan blue, 0.4% solution. CD4 + CD25 + CD127 dim/-were freshly isolated from buffy coats using the Regulatory T Cell Isolation Kit II (Miltenyi Biotec, Germany). In short, cells were washed twice with MACS buffer (PBS with 2 mM EDTA and 0.5% BSA) and Tregs were purified using a combination of non-CD4 + and CD127 high cell depletion and enrichment steps for CD4 + CD25 + CD127 dim/-cells (Miltenyi Biotec), using the MACS column (Miltenyi Biotec, Germany).
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