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Ud 100 sonicator

Manufactured by TOMY
Sourced in Japan

The UD-100 sonicator is a laboratory equipment designed for the purpose of sample preparation through ultrasonic disruption. The device generates high-frequency sound waves that cause cavitation, effectively breaking down and dispersing samples.

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2 protocols using ud 100 sonicator

1

Lipid Extraction and Analysis Protocol

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To analyze the lipids accumulating in cells, samples were prepared as follows. Cells were collected from the main cultivation and freeze-dried. Twenty milligrams of dried cells were transferred into a 15-mL glass tube, to which 2 mL of a solvent (chloroform:methanol = 2:1) was added, and lipids extracted using the UD-100 sonicator (TOMY, Tokyo, Japan: set at an output of 70 for 10 min). The resultant samples were left overnight in a cool dark place to improve extraction. Subsequently, they were centrifuged at 3,000 × g for 10 min and the supernatants were collected. To wash the samples, equal amount of 0.9 % aqueous KCl solution was added to the supernatant, mixed, and subjected to centrifugation at 2,000 × g for 5 min. Approximately 2 mL of the bottom fraction was collected as the organic layer, transferred to a 15-mL glass tube, and placed in a rotary vacuum evaporator (V-850: BUCHI, Flawil, Switzerland). The resultants were dissolved in 200 μL chloroform, and eventually used for TLC. A 4-μL aliquot of each sample was spotted onto the origin (ori) of a silica gel plate (#60F254: Merck Millipore, Darmstadt, Germany). Lipids on the plate were developed with an eluent (hexane:diethylether:acetic acid = 80:20:1) and stained with 5 % (v/w in EtOH) phosphomolybdic acid solution (#32186-00: Kanto Kagaku Co., Ltd., Tokyo, Japan).
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2

Bacteroides Lysate Modulates Myeloid Progenitor Cells

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The various strains of Bacteroides (Bacteroides dorei, Bacteroide thetaiotaomicron, Bacteroides ovatus, Bacteroides stercoris, Bacteroides uniformis and Bacteroides vulgatus) were purchased from RIKEN Bioresource Research Center. Bacteroides and Feacalibacterium praunitzii was grown in GAM medium (Nissui) under anaerobic conditions in Bactron 300 (Shellab), collected and centrifuged at 7,000 rpm for 5 minutes, 4°C and resuspended in PBS. The bacterial suspension was sonicated with a UD-100 sonicator (TOMY), maximum power with 30 second intervals and the lysate obtained by ultracentrifugation at 100,000 g for 60 minutes, 4°C (CS 100FNX, HITACHI) resuspended in PBS and the concentration was measured by Bio-Rad protein assay dye reagent concentrate (BioRad). Mice were i.p. injected with 15µg of the bacterial lysate or PBS, and analyzed by FACS 12 hours later. Three thousand MPP2 (LSKCD48 + CD150 + ) cells of BM were sorted into 96 well plate containing 100µl of SF-O3 medium with 10% FBS and cultured with 100x GlutaMAX Supplement, 50x penicillin/streptomycin, 10ng/ml SCF, 10ng/ml IL-3, 10ng/ml GM-CSF, 50ng/ml EPO, 50ng/ml TPO, and 10mg/ml Bacteroides lysate. GM-CSF receptor expression levels were analyzed by FACS 2 and 4 days after culture.
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