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Mont ge dna gel extraction kit

Manufactured by Merck Group
Sourced in United States

The Montàge DNA gel extraction kit is a laboratory equipment product designed for the purification of DNA fragments from agarose gels. It facilitates the extraction and recovery of DNA samples from gel electrophoresis.

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3 protocols using mont ge dna gel extraction kit

1

Meq Gene Sequence Analysis and Phylogenetics

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Meq gene specific bands were excised from the agarose gel, purified using Montàge DNA gel extraction kit (Millipore, USA) and sequenced in an automated ABI 3730 DNA sequencer (Applied Biosystems, USA). The obtained sequence was aligned by the Clustal W method. The obtained nucleotide sequences were compared with MDV sequences available in Genbank by BLAST web tool of the Genbank (Table-1). A phylogenetic tree was constructed using MEGA version 5.20 software.
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2

Molecular Identification of AEV Isolate

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The detected AEV’s 619 bp PCR-specific band of the VP2 gene was isolated from the agarose gel, purified by the Montàge DNA gel extraction kit (Millipore, USA), and sequenced in an automated ABI 3730 DNA sequencer (Applied Biosystems, USA). The obtained sequence was compared to AEV sequences in GenBank using an online BLAST server (Table 1). The MEGA version 5.20 software was used for the creation of the phylogenetic tree using the Maximum Likelihood system.
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3

Viral Gene Amplification and Sequencing

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The previously extracted viral DNAs were used to amplify the P32 gene, PRO30 gene and GPCR gene. The 20-µl total volume of the PCR reaction contained 2 µl of each purified genomic DNA, 10 µl of a 2X HotStart Taq Plus Master Mix (Qiagen, USA) containing 1.5 mM of MgCl2, 200 µM of each dNTP and 1 unit of HotStart Taq Plus DNA polymerase, 1 µl (10 µM) of each forward and reverse primer, 2 µl of MgCl2 (25 mM) and 4 µl of nuclease-free water. The thermal cycling parameters were 95ºC for 5 minutes for enzyme activation and initial denaturation, followed by 35 cycles of 94ºC for 30 seconds; the primers were annealing for 30 seconds (Table 1) and at 72ºC for 120 seconds, and a final extension step took place at 72ºC for 10 minutes. The amplified products were electrophoresed in 1.2% agarose gel stained with ethidium bromide and documented using the ultraviolet gel documentation system (Bio-Rad Laboratories, USA). The specific PCR products were extracted from the agarose gel, purified using the Montàge DNA gel extraction kit (Millipore, USA) and sequenced in an automated ABI 3730 DNA sequencer (Applied Biosystems, USA).
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