The largest database of trusted experimental protocols

25 protocols using gaasp pmt

1

Multi-modal Fluorescence Imaging Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The epifluorescence imaging was performed on a custom upright microscope equipped with a Prizmatix LED (UHP-T-LED-White-High-CRI), using either of two objectives a 35 mm F/1.4 Computar or a 25 mm F/0.95 Computar CCTV lens. We used a 479 nm (Semrock FF01-479/40) excitation filter combined with a 515 nm long pass dichroic mirror, and a bandpass filter. The neuronal activity was recorded with a NeuroCCD SM256 camera (RedShirtImaging, USA) with 2 × 2, or 3 × 3 binning and at a frame rate between 50–250 Hz. The images were collected with NeuroPlex software (RedShirtImaging, USA).
For 2-photon imaging, we used a modified MOM two-photon laser-scanning microscope (Sutter Instruments, USA) with a Nikon 16x, 0.8NA lens, a Coherent Discovery laser light source, and detected fluorescence emission on a GaAsP PMT (#H10770PA-40–04, Hamamatsu, Japan). 2-photon excitation of the super ecliptic pHluorin GFP chromophore was achieved with 940–980 nm laser light with an imaging speed of 31 frames per second (resonant scanners; Cambridge Technology, USA). The laser power was measured by placing a power meter (PM100D, Thorlabs) directly underneath the objective lens at the beginning of experiments and ranged between 75–140 mW.
+ Open protocol
+ Expand
2

In vivo Two-Photon Imaging of GCaMP6s

Check if the same lab product or an alternative is used in the 5 most similar protocols
Pups were maintained under inhaled isoflurane anesthesia (2.5–3.5%) during the imaging session. We used a Bruker-Ultima resonant-galvo system with an identical configuration to the in vitro system. In vivo, imaging through the craniotomy was performed using a Nikon LWD water immersion objective (16X, 0.8 N.A.). Two-photon images were acquired using galvo-scanning at a minimum depth of 200 µm from the surface. GCaMP6s was excited at a wavelength of 920 mm, and emission was filtered and acquired using a single GaAsP PMT (Hamamatsu Photonics). Time series acquisition of single XY planar raster scans was performed at a 256×256-pixel resolution at ~2.67 frames/second speed. Movement in XY dimensions was minimal and was corrected by motion correction algorithms (ImageJ). Motion artifact in the Z plane was identified by frames with repeated cytoarchitecture. All images were acquired at 2X digital zoom.
+ Open protocol
+ Expand
3

Two-Photon Imaging of VTA and LC Axons

Check if the same lab product or an alternative is used in the 5 most similar protocols
Imaging was done using a laser scanning two-photon microscope (Neurolabware). Using a 8 kHz resonant scanner, images were collected at a frame rate of 30 Hz with bidirectional scanning through a 16x/0.8 NA/3 mm WD water immersion objective (MRP07220, Nikon). GCaMP6s and GCaMP7b were excited at 920 nm with a femtosecond pulsed two photon laser (Insight DS + Dual, Spectra-Physics) and emitted fluorescence was collected using a GaAsP PMT (H11706, Hamamatsu). The average power of the laser measured at the objective ranged between 50–80 mW. A single imaging field of view (FOV) between 400–700 μm equally in the x/y direction was positioned to collect data from as many VTA or LC axons as possible. Time-series images were collected from 3–5 planes spaced 2 um apart using an electric lens to ensure axons remained in a field of view and reduce power going to an individual plane. Images were collected using Scanbox (v4.1, Neurolabware) and the PicoScope Oscilloscope (PICO4824, Pico Technology, v6.13.2) was used to synchronize frame acquisition timing with behavior.
+ Open protocol
+ Expand
4

Two-Photon Imaging of Neuronal Activity

Check if the same lab product or an alternative is used in the 5 most similar protocols
Imaging was done using a laser scanning two-photon microscope (Neurolabware). Using a 8 kHz resonant scanner, images were collected at a frame rate of 30 Hz with bidirectional scanning through a 16x/0.8 NA/3 mm WD water immersion objective (MRP07220, Nikon). GCaMP6f and GCaMP7b were excited at 920 nm with a femtosecond-pulsed two photon laser (Insight DS + Dual, Spectra-Physics) and emitted fluorescence was collected using a GaAsP PMT (H11706, Hamamatsu). The average power of the laser measured at the objective ranged between 50–70 mW. A single imaging field of view (FOV) between 400–700 µm equally in the x/y direction was positioned to collect data from as many CA1 pyramidal cells or dopaminergic axons as possible. Time-series images were collected through Scanbox (v4.1, Neurolabware) and the PicoScope Oscilloscope (PICO4824, Pico Technology, v6.13.2) was used to synchronize frame acquisition timing with behavior.
+ Open protocol
+ Expand
5

Two-Photon Calcium Imaging in Dorsal CA1

Check if the same lab product or an alternative is used in the 5 most similar protocols
Two-photon calcium imaging experiments were performed on the day of the window implant using a single-beam multiphoton pulsed laser scanning system coupled to a microscope (TriM Scope II, LaVision Biotech). The Ti:sapphire excitation laser (Chameleon Ultra II, Coherent) was operated at 920 nm. GCaMP fluorescence was isolated using a bandpass filter (510/25). Images were acquired through a GaAsP PMT (H7422-40, Hamamatsu) using a ×16 immersion objective (NIKON, NA 0.8). Using Imspector software (LaVision Biotech), the fluorescence activity from a 400 μm × 400 µm field of view was acquired at approximately 9 Hz with a 1.85 μs dwell time per pixel (2 μm/pixel). Imaging fields were selected to sample the dorsal CA1 area and maximize the number of imaged neurons in the stratum pyramidale. Piezo signal, camera exposure time, and image triggers were synchronously acquired and digitized using a 1440A Digidata (Axon Instrument, 50 kHz sampling) and the AxoScope 10 software (Axon Instrument). During the imaging session, body temperature is continuously controlled.
+ Open protocol
+ Expand
6

Two-Photon Imaging of Hippocampal Calcium Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
Imaging was done using a laser scanning two-photon microscope (Neurolabware). The microscope consisted of an 8 KHz resonant scanning module (Thorlabs), a 16×/0.8 NA/3 mm WD water immersion objective (MRP07220, Nikon). GCaMP6f was excited at 920 nm with a femtosecond-pulsed two-photon laser (Insight DS + Dual, Spectra-Physics) and the fluorescence was collected using a GaAsP PMT (H11706, Hamamatsu). The microscope is customized to tilt the objective, which we tilted to be perpendicular to the CA3 head plate angle but kept vertical for CA1 imaging. Stray light from the VR monitor was blocked from entering the objective lens by a dark rubber tube attached to the implanted head ring and the objective. Laser average power after the objective was ~60 mW for CA1 imaging and ~120 mW for CA3 to gain similar baseline fluorescence levels in the CA1 or CA3 FOV. Scanbox (Neurolabware) was used for microscope control and data acquisition. Time-series videos were acquired at around 11 Hz for each of the three imaging planes (using an electronic lens) to maximize the number of neurons imaged in each mouse. The PicoScope Oscilloscope (PICO4824, Pico Technology) collected the signal from the microscope to synchronize frame acquisition timing with behavior (see below).
+ Open protocol
+ Expand
7

Calcium and Glutamate Signaling in Hair Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Hair cell recordings were performed from the primary neuromasts (L2–L4) originating from the first primordium (primI) (Pujol-Martí & López-Schier, 2013 (link)). Calcium and glutamate signals in hair cells and afferent terminals were recorded using a two-photon laser-scanning microscope (Bergamo II System B232, Thorlabs Inc., USA) based on a mode-locked laser system operating at 925 nm, 80 MHz pulse repetition rate, <100 fs pulse width (Mai Tai HP DeepSee, Spectra-Physics, USA). Images were captured with a 60X objective (LUMFLN60XW, Olympus, Japan) using a GaAsp PMT (Hamamatsu) coupled with a 525/40 bandbass filter (FF02-525/40-25, Semrock). Images were analysed offline using custom built software routines written in Python (Python 3.7, Python Software Foundation) and ImageJ (NIH). Ca2+ signals were measured as relative changes of fluorescence emission intensity (ΔF/F0). Images were acquired at 15 (512 x 512 pixels, Ca2+ imaging) or 396 (256 x 32 pixels, when using the iGluSnFR zebrafish) frames per second. Signals from individual ROI were smoothed offline using a Savitzki-Golay filter (windows size:11; polynomial order: 1). Traces were normalized to baseline fluorescence (F0) which was calculated as the 5th percentile of the fluorescence values of the entire trace.
+ Open protocol
+ Expand
8

Two-Photon Imaging of CA3PCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
For experiments involving imaging of CA3PCs, single-plane resonant scanning 2p imaging was performed as described elsewhere15 (link). Briefly, imaging was conducted using a 2p 8-kHz resonant scanner (Bruker) and a 16X water immersion objective (Nikon). A 920-nm laser (50–100 mW; Coherent) was used for excitation, and fluorescence signals were collected with a GaAsP PMT (Hamamatsu). A custom dual-stage preamp (Bruker) was used to amplify signals before digitization.
+ Open protocol
+ Expand
9

In Vivo Two-Photon Imaging of Axonal Activity

Check if the same lab product or an alternative is used in the 5 most similar protocols
Imaging was done using a laser scanning two-photon microscope (Neurolabware). Using a 8 kHz resonant scanner, images were collected at a frame rate of 30 Hz with bidirectional scanning through a 16x/0.8 NA/3 mm WD water immersion objective (MRP07220, Nikon). GCaMP6s and GCaMP7b were excited at 920 nm with a femtosecond pulsed two photon laser (Insight DS + Dual, Spectra-Physics) and emitted fluorescence was collected using a GaAsP PMT (H11706, Hamamatsu). The average power of the laser measured at the objective ranged between 50–80 mW. A single imaging field of view (FOV) between 400–700 μm equally in the x/y direction was positioned to collect data from as many VTA or LC axons as possible. Time-series images were collected from 3–5 planes spaced 2 um apart using an electric lens to ensure axons remained in a field of view and reduce power going to an individual plane. Images were collected using Scanbox (v4.1, Neurolab-ware) and the PicoScope Oscilloscope (PICO4824, Pico Technology, v6.13.2) was used to synchronize frame acquisition timing with behavior.
+ Open protocol
+ Expand
10

Two-Photon Imaging of Cellular Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
Imaging was done using a laser scanning two-photon microscope (Neurolabware). Using an 8kHz resonant scanner, images were collected at a frame rate of 30 Hz with bidirectional scanning through a 16x/0.8 NA/3 mm WD water immersion objective (MRP07220, Nikon). GCaMP6f was excited at 920 nm with a femtosecond-pulsed two photon laser (Insight DS+Dual, Spectra-Physics) and emitted fluorescence was collected using a GaAsP PMT (H11706, Hamamatsu). The average power of the laser measured at the objective ranged between 50–70 mW. A single imaging field of view (FOV) between 400–700 μm equally in the x/y direction was positioned to collect data from as many CA1 pyramidal cells or dopaminergic axons as possible. Time-series images were collected through Scanbox (v4.1, Neurolabware) and the PicoScope Oscilloscope (PICO4824, Pico Technology, v6.13.2) was used to synchronize frame acquisition timing with behavior.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!