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Plvx acgfp1 n1 vector

Manufactured by Takara Bio

The PLVX-AcGFP1-N1 Vector is a lentiviral expression vector that allows for the expression of target genes fused to the Aequorea coerulescens green fluorescent protein (AcGFP1). The vector backbone contains the necessary elements for packaging, transduction, and stable integration of the transgene into the host cell genome.

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7 protocols using plvx acgfp1 n1 vector

1

Plasmid Construct Generation for IPMK Study

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The shRNA and scrambled control plasmids were from Sigma-Aldrich. The myc tagged murine WT IPMK, IPMK K129A, IPMK K129A/S235A and IPMK ΔNLS constructs were cloned to pCDH-EF1-MCS-T2A-copGFP vector (System Biosciences). The myc tagged human WT IPMK, IPMK K146A, IPMK ΔNLS and myc tagged GFP constructs were cloned to pCDH-EF1-MCS-T2A-copGFP vector (System Biosciences). The GFP tagged WT IPMK and IPMKΔNLS were cloned to pLVX-AcGFP1-N1 vector (Clontech). The flag tagged pVHL and HIF-1α genes were cloned to pLVX-AcGFP1-N1 vector (Clontech). The GST tagged GFP and PHD2 were cloned to pCDH-EF1-MCS-T2A-copGFP vector (System Biosciences). Lenti virus were generated by transfection of lenviviral vector together with pMD2.G and psPAX2 to HEK293T/17 cells44 (link).
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2

Generating Fluorescent Parkin C431S

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Parkin mutant (C431S) complementary DNAs (cDNAs) were generated by PCR using pEGFP-Parkin C431S (Addgene, 45877) as templates and inserted into pLVX-AcGFP1-N1 Vector (TaKaRa, 632154) with a C-terminal AcGFP1 protein (AcGFP1-Parkin C431S).
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3

Cloning and Expression of Signaling Proteins

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Myc-tagged GFP, myc-tagged WT IP6K1, myc-tagged kinase-defective mut IP6K1 (K226A), flag-tagged PI3K p85α, flag-tagged ΔRhoGAP PI3K p85α, flag-tagged SH3 domain of PI3K p85α, flag-tagged RhoGAP domain of PI3K p85α, flag-tagged nSH2 domain of PI3K p85α, flag-tagged cSH2 domain of PI3K p85α, GST-fused PI3K p85α, flag-tagged Na+/K+-ATPase-α1, GST-fused Na+/K+-ATPase-α1, GST-fused AP2β, and GST-fused GFP were cloned into the pCDH-EF1-MCS-T2A-copGFP vector (System Biosciences). Na+/K+-ATPase-α1 was cloned into pLVX-AcGFP1-N1 vector (Takara Bio) to make GFP-fused Na+/K+-ATPase-α1. The PCR products were generated by using Phusion Polymerase (Thermo Fisher Scientific) and inserted into the vectors using the In-Fusion HD Enzyme (Takara Bio). IP6K1 shRNA and scramble control shRNA plasmids were purchased from MilliporeSigma. All newly constructed plasmids were sequence verified.
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4

Cloning and Expression of Protein Constructs

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Myc-tagged GFP, myc-tagged WT IP6K1, myc-tagged kinase defective mutant IP6K1 (K226A), flag-tagged PI3K p85α, flag-tagged ΔRhoGAP PI3K p85α, flag-tagged SH3 domain of PI3K p85α, flag-tagged RhoGAP domain of PI3K p85α, flag-tagged nSH2 domain of PI3K p85α, flag-tagged cSH2 domain of PI3K p85α, GST-fused PI3K p85α, flag-tagged Na+/K+-ATPase-α1, GST-fused Na+/K+-ATPase–α1, GST-fused AP2β and GST-fused GFP were cloned into the pCDH-EF1-MCS-T2A-copGFP vector (System Biosciences). Na+/K+-ATPase-α1 was cloned into pLVX-AcGFP1-N1 vector (Takara Bio) to make GFP-fused Na+/K+-ATPase-α1. The PCR products were generated by using Phusion Polymerase (Thermo Fisher Scientific) and inserted into vectors using In-Fusion HD Enzyme (Takara Bio). IP6K1 shRNA and scramble control shRNA plasmids were purchased from MilliporeSigma. All newly constructed plasmids were sequence-verified.
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5

Stable GRP78 Overexpression and Knockdown

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Human colon carcinoma HT29 and DLD1 cell lines were obtained from the American Type Culture Collection and cultured in RPMI-1640 medium containing 10% FBS. For stable cell line selection, human GRP78 cDNA was subcloned into the pLVX-AcGFP1-N1 Vector (Clontech). GRP78 shRNAs constructed in pLKO.1-Puro were purchased from Sigma (Mission shRNA). GRP78 overexpression/shRNA plasmid, psPAX2 and pMD2.G were co-transfected into 293T cells at 15:10:5 g. Media containing virus was collected and concentrated using 100 kDa ultrafiltration membranes (Millipore). DLD1 cells were infected with the viruses in the presence of polybrene (8 μg/ml) for 24 h, and then subjected to selection by 5 μg/ml puromycin. Hairpin sequences in these shRNA constructs are depicted as follows: Table 1 shRNA sequences used in this study: GRP78-1: 5’-CCGGAGATTCAGCAACTGGTTAAAGCT CGAGCTTTAACCAGTTGCTGAATCTTTTTTG-3’; GRP78-2: 5’-CCGGGAGCGCATTGATACTAGAAATCTCGAGATTTCTAGTA TCAATGCGCTCTTTTTG-3’; Control: 5’-CCGGCCTAAGGTTA AGTCGCCCTCGCTCGAGCGAGGGCGACTTAACCTTAGGTT TTTG-3’.
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6

Multimodal Cell Line Protocol

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NSC‐34 (Cedarlane), HEK 293T (ATCC) and SH‐SY5Y (ATCC) cells were used in this study. SH‐SY5Y cells were differentiated with retinoic acid prior to incubation with sEV. HEK 239A with GFP knocked‐into the AAVS1 locus using CRISPR was obtained from Ryan Russell (University of Ottawa). emGFP was knocked‐in with CRISPR technology. HEK 293T expressing GFP siRNA in a pre‐miR‐451 backbone was previously described (Reshke et al., 2020 (link)). Neonatal normal human dermal fibroblast (NHDF‐Neo) (Cedarlane, CC‐2509) were transduced with lentivirus (pLVX‐AcGFP1‐N1 vector, Clontech, 632154)
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7

Lentiviral-Mediated GRP78 Manipulation

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Human GRP78 cDNA was subcloned into the lentiviral expressing vector pLVX-AcGFP1-N1 Vector (Clontech). GRP78 shRNAs constructed in pLKO.1-Puro were purchased from Sigma (Mission shRNA). GRP78 overexpression/shRNA plasmid, pCMVdR8.91 and pCMV-VSV-G were co-transfected into 293T cells using the Calcium Phosphate method at 15:10:5 g (for a 10-cm dish). Media containing virus was collected 48 h after transfection and then concentrated using 100 kDa ultrafiltration membranes (Millipore). DLD1 cells were infected with the viruses in the presence of polybrene (8 μg/ml) for 48 h, and then subjected to selection by 5 μg/ml puromycin for 72 hours. Hairpin sequences in these shRNA constructs are depicted in Supplementary Table 3.
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