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6 protocols using mono mac 6

1

Cell Line Characterization and Verification

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MONOMAC-6, THP-1, KOCL-48, KASUMI-1, ML-2, and NB4 cells were purchased from ATCC (Manassas, VA), and cultured as described previously57 (link),59 (link). All cell lines were tested for mycoplasma contamination yearly using a PCR Mycoplasma Test Kit (PromoKine) and were proven to be mycoplasma negative. All cell lines were authenticated through STR profiling yearly.
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2

Validated Cell Lines and Animal Protocols for Biomedical Research

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Experiments in this study were performed according to the standards and guidelines approved by The University of Rochester Institutional Biosafety Committee (study approval number: Rahman/102054/09-167/07-186; identification code: 07-186; date of approval: 5 January 2019 and 3 February 2020). Validated cell lines, human bronchial epithelial cell lines (16-HBE and BEAS2B) and human monocytic leukemia derived cell lines (Mono-Mac-6 or MM6 cells), were procured from ATCC, USA. Ethical approval was not necessary for the utilized cell lines.
All mouse housing, handling, exposure, and procedure protocols used in this study were approved by the University Committee on Animal Research (UCAR) Committee of the University of Rochester, Rochester, NY (UCAR protocol 102204/UCAR-2007-070E, date of approval: 5 January 2019 and 3 February 2020).
Human plasma samples used for lipidomics analysis were from the study conducted at the University of Rochester Medical Center (Rochester, NY, USA; Institutional Review Board Approval RSRB00064337) [9 (link)].
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3

Collection of Human Leukemia Cell Lines

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The human AML tumor cell lines Molm-13 (ACC-554), HL-60 (CCL-240), EOL-1 (ACC-386), HEL (ACC-11), Mono-Mac-6 (ACC-124), THP-1 (TIB-202), and Ma9RAS (MLL/AF9), the CML cell lines KU812 (CRL-2099) and K562 (CCL-243), and the human embryonic kidney epithelial cell line 239T (CRL-3216) were obtained from ATCC and stored in a master cell bank. Cells derived from working cell banks were used for the present study. PBMCs were isolated by Ficoll gradient density centrifugation using Ficoll-Paque (Velizy-Villacoublay, France) from anonymous blood samples collected from healthy donors at a French blood center (Besançon, France). Cord Blood CD34+ cells were purchased from Lymphobank Besançon, France. AML primary cell collection from patients with AML was performed at the time of diagnosis.
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4

AML Cell Lines and Primary Samples

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AML cell lines MOLM-14, MV4–11 (with FLT3-ITD mutation), MonoMac 6 (with activating FLT3-V592A point mutation), and THP-1 (FLT3 wild type) were purchased from the American Type Culture Collection (ATCC). The short tandem repeat (STR) analysis was not done on leukemia cell lines. The primary leukemia cells were isolated from bone marrow or peripheral blood of AML patients under the auspices of the institutional (IRB approved) Tumor and Cell Procurement Bank at University of Maryland and Johns Hopkins University with informed patient consent in accordance with the Declaration of Helsinki. The mononuclear cells were isolated using Lymphocyte Separation Medium (Cellgro, Mediatech) according to manufacturer’s protocol. Primary cells were used either fresh or after viable freezing in FBS/5% DMSO. AML16, AML17, and AML18 cells were used after thawing. AML20 cells were used freshly collected without cryopreservation. All cells were cultured in RPMI 1640 medium (Life Technologies) supplemented with 10% FBS (HyClone, Thermo Scientific) and 200 mM L-Glutamine (Life Technologies).
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5

Characterization of Engineered CAR T Cells

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The CEMT (CRL-2265™), HEK293T (CRL-11268™), MM1S (GFP+, Luciferase+, CRL-2974™) and Monomac6 (Luciferase+) cell lines were purchased from the American Type Culture Collection (ATCC) and stored in our master cell bank. Experimental CAR T cells were generated from healthy donors as described previously.
The CAR constructs included both approved CD19 CAR constructs (tisa-cel and axi-cel). We also used two experimental anti-IL-1RAP-CAR and anti-CS1-CAR vectors that mimic the intracellular activation domains of both commercial CAR T drugs. Axi-cel and tisa-cel are usually detected by flow cytometry using a biotinylated recombinant CD19 protein target. Our 2 experimental vectors carry truncated CD19 (∆CD19) and c-Myc Tag sequences, allowing for flow cytometry (FC) detection.
Blood samples were collected from patients treated with axi-cel or tisa-cel. All subjects provided written consent.
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6

Leukemia Cell Line and Primary AML Cell Cultures

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THP-1, MV4–11, MonoMac-6, HL-60, and K562 cells were purchased from the American Type Culture Collection (ATCC, Manassas, VA). MOLM-14 cells were the kind gift of Dr. Mark Levis from Johns Hopkins University. All cell lines were grown at 37°C with 5% CO2 atmosphere with Roswell Park Memorial Institute (RPMI) 1640 (Life Technologies, Carlsbad, CA) supplemented with heat-inactivated 10% (v/v) fetal bovine serum (FBS). Cell lines were grown and maintained following ATCC recommendations. We performed in-house karyotyping and molecular analyses on the cell lines and report them in Supplementary Table 2.
Primary human leukemia cells (primary AML) derived from patients were obtained through the institutional (IRB approved) Tumor and Cell procurement Bank at the University of Maryland. Primary AML cells, which had been previously isolated through ficoll separation and frozen viably, were thawed into room temperature RPMI 1640 with 10% FBS and supplemented with DNase I 20U/ml. Viable cell numbers were obtained using trypan blue exclusion, and cells were plated into 96-well dishes at 5×104 cells/well in RPMI/10% FBS.
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