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Sybr green rox qpcr master mix

Manufactured by Takara Bio
Sourced in Singapore

The SYBR Green/ROX qPCR Master Mix is a ready-to-use solution designed for quantitative real-time PCR (qPCR) experiments. It contains SYBR Green I dye and ROX passive reference dye, enabling detection and quantification of DNA targets.

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3 protocols using sybr green rox qpcr master mix

1

Cardiac Gene Expression Analysis Protocol

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Total RNA was extracted from frozen heart tissues (100 mg) and H9C2 cells with Trizol reagent (Invitrogen, Brazil). RNA concentration was determined spectrophotometrically at 260/280 nm wavelength using a commercial kit (BioTek Epoch, USA). First-strand cDNA was generated from RNA using Revertaid First Strand cDNA synthesis kit (TaKaRa, Kusatsu, Japan). PCR reactions were performed with quantitative PCR instrument (CFX connectTM Real-Time system, Bio-Rad, Singapore) using SYBR Green/ROX qPCR Master Mix (TaKaRa, Kusatsu, Japan) and quantified using Bio-Rad CFX manager. Gapdh was used as the internal control gene.
The primer sequences used for RT-qPCR analyses are shown as follows:

(F: 5′-GAGGATGGTGGATGGCTACA-3′, R: 5′-TCCCGTGCCCTACTTCAAT-3′)

(F: 5′-CTGATCGAGAGCAAGGAA-3′, R: 5′-TCAAGGAACACCACATTGGA-3′)

(F: 5′-CAATGGAGGAAGAGGAGGTC-3′, R:5′-GCGTCTGAGGAGTTGGAAAT-3′)

(F: 5′-GGGAACGACCGAGTTCAGACTATC-3′, R: 5′-GGCGTCAAACTTGTGGCTCA-3′)

(F: 5′-CAGTGCCAGCCTCGTCTCAT-3′, R: 5′-AGGCCATCCACAGTCTTC-3′)

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2

Quantifying STCAT16 Expression by RT-qPCR

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The relative expression level of STCAT16 was determined by RT-qPCR. Total RNA was extracted from 100 mg tissues or cells using TRIzol® (Invitrogen; Thermo Fisher Scientific, Inc.). Subsequently, RNA was reverse-transcribed into cDNA with a Moloney murine leukaemia virus reverse transcriptase kit (Thermo Fisher Scientific, Inc.). The temperature protocol was as follows: 42°C for 60 min, 70°C for 5 min. According to the manufacturer's instructions, qPCR was executed using SYBR-Green I (Takara Biotechnology, Co., Ltd., Dalian, China) and an Applied Biosystems 7500 Real-Time PCR System (Thermo Fisher Scientific, Inc.). The qPCR reaction mixture contained 10 µl SYBR-Green/ROX qPCR Master Mix (Takara Biotechnology, Co., Ltd.), 1 µl forward primers (STCAT16, 5′-CATCAAGGCTTGTGGGATGT-3′; GAPDH, 5′-CTGGGCTACACTGAGCACC-3′), 1 µl reverse primers (STCAT16, 5′-AAGCCGAAAGGTCAACTGC-3′; GAPDH, 5′-AAGTGGTCGTTGAGGGCAATG-3′), 2 µl cDNA and 6 µl sterile double steamed water. GAPDH was used as a reference gene. The thermocycling conditions were the following: 95°C for 10 min, followed by 40 cycles at 95°C for 15 sec and 60°C for 60 sec. Primers of STCAT16 were synthesized by Shanghai Ruian BioTechnologies Co., Ltd. (Shanghai, China). The data were quantified using the 2−ΔΔCq method (24 (link)). Each experiment was performed in triplicate.
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3

Quantifying FNDC5 expression in heart tissues

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Total RNA was extracted from frozen heart tissues (100 mg) and H9C2 cells with Trizol reagent (Invitrogen, Sao Paulo, Brazil). RNA concentration was determined spectrophotometrically at 260/280 nm wavelength using a commercial kit (BioTek Epoch, Winooski, VT, USA). First-strand cDNA was generated from RNA using Revertaid First Strand cDNA synthesis kit (TaKaRa, Kusatsu, Japan). PCR reactions were performed with quantitative PCR instrument (CFX connectTM Real-Time system, Bio-Rad, Singapore) using SYBR Green/ROX qPCR Master Mix (TaKaRa, Kusatsu, Japan) and quantified using Bio-Rad CFX manager. GAPDH was used as the internal control gene. The primer sequences used for RT-qPCR analyses are shown as follows:
FNDC5(F:5′-GGCTGGGAGTTCATGTGGAA-3′; R:5′-TGGGAAGCGGTTATCTTTGCT-3′)
GAPDH(F:5′-CAGTGCCAGCCTCGTCTCAT-3′; R:5′-AGGGGCATCCACAGTCTTC-3′)
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