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Dm irb confocal microscope

Manufactured by Leica
Sourced in Germany, United States

The Leica DM-IRB confocal microscope is a high-performance optical instrument designed for advanced imaging and analysis. It features a confocal scanning system that enables the acquisition of high-resolution, three-dimensional images of microscopic samples. The DM-IRB is equipped with a range of advanced optics and imaging capabilities to support various scientific and research applications.

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9 protocols using dm irb confocal microscope

1

Visualization of Cy5-CCN2(IV) Localization

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Cells were treated with Cy5-CCN2(IV) and examined by a Leica DM-IRB confocal microscope (Leica Microsystems; Wetzlar, Germany) equipped with a X40 oil immersion objective. Nuclei were stained with 1 μg/mL DAPI (4′,6-diamidino-2-phenylindole; Sigma-Aldrich) to control for equal cell density. The absence of the primary antibody was used as a negative control. Fluorophore Cy-5 emitted fluorescence was monitored with a 550 ± 20 nm band pass or a 670 nm long-pass filter, and DAPI was excited using a DIODE laser.
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2

Live Cell Confocal Imaging of Mutant hClC-1

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Live cell confocal imaging was performed on transiently transfected MDCK II cells grown on special confocal tissue culture treated dishes (Ibidi, Martinsried, Germany). Confocal images were obtained using a Leica DM IRB confocal microscope with a TCS SP2 AOBS scan head (Leica Microsystems, Wetzlar, Germany) after 2 days expression of fluorescent YFP or CFP fusion proteins of WT or mutant hClC-1. Protein biosynthesis was interrupted 10–20 min before imaging by cycloheximide (0.04 mg/ml) to reduce the amount of immature hClC-1 proteins localized in intracellular compartments.
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3

Immunohistochemical Analysis of LC3B

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Paraffin-embedded kidney sections (3 μm) were subjected to Antigen retrieval by PTlink link system. After the slides were blocked with 10% BSA and 10% FBS for 1 h, they were incubated with LC3B primary antibody (1/200; Nobus Biological; Englewood, CO, USA) for 1 h, followed by an AlexaFluor® 488 conjugated rabbit anti-mouse-conjugated secondary antibody (1/200; Invitrogen), for 1 h. Absence of primary antibody was used as negative control. Samples were mounted in prolong gold (Thermo Fisher Scientific; Waltham, MA, USA) and examined using a Leica DM-IRB confocal microscope.
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4

Imaging Phosphorylated EGFR in Kidney

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Kidney sections were stained with anti-phosphorylated EGFR (1:200; Dako Agilent, Santa Clara, CA, USA), Alexa Fluor 488 conjugated goat anti-mouse secondary antibodies (1:300; Invitrogen, Waltham, MA, USA), and examined using a Leica DM-IRB confocal microscope.
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5

Immunofluorescence Analysis of VSMC p-SMAD2/4

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Immunofluorescence studies were assessed in VSMCs seeded in 24-well Multidish over glass coverslips (Cultek, Madrid, Spain). Once experiments were done, cells were fixed in 4% PFA, treated with 0.1% Triton-X100 and blocked with 4% BSA in TBS. Afterwards, cells were incubated with p-SMAD2 ([1/200]; #3108, Cell signaling, MA, USA) and p-SMAD4 antibodies ([1/200]; sc7966; Santa Cruz Biotechnology, Heidelberg, Germany) overnight, followed by 1 h of incubation with AlexaFluor®488 conjugated secondary antibody (1/300; Invitrogen, Life Technologies, Philadelphia, PA, USA). DAPI was used as nuclear counterstaining (Sigma Chemical). Negative control was also performed in absence of primary antibody (data not shown) in order to verify specificity of the immunostaining. Finally, samples were mounted in ProlongGoldTM (Invitrogen, Life Technologies) and visualized in a Leica DM-IRB confocal microscope.
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6

Immunohistochemical Analysis of SOX9 and Collagen IV

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In paraffin-embedded kidney sections (3 µm), antigens were retrieved by the PTlink link system. After the slides were blocked with 10% BSA and 10% FBS for 1 h, they were incubated with anti-SOX9 (1/200; Millipore) or anti-type IV collagen (1:1000; Abcam) for 1 h, followed by an AlexaFluor® 488 conjugated rabbit anti-mouse secondary antibody (1/200; Invitrogen); AlexaFluor® 633 conjugated rabbit anti-mouse secondary antibody (1/200; Invitrogen) or AlexaFluor® 568 conjugated rabbit anti-mouse secondary antibody (1/200; Invitrogen) for 1 h. The absence of a primary antibody was used as a negative control. Samples were mounted in prolong gold (Thermo Fisher Scientific; Waltham, MA, USA) and examined using a Leica DM-IRB confocal microscope.
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7

Kidney Immunofluorescence Staining for FGF23

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Paraffin-embedded kidney sections (3 μm) were submitted for antigen retrieval. After the slides were blocked with 10% BSA and 10% FBS for 1 h, they were incubated with FGF23 primary antibody (1/200) for 1 h, followed by a AlexaFluorTM 594 conjugated secondary antibody (1/200; Invitrogen, Waltham, MA, USA) for 1 h. The absence of primary antibody was used as negative control. Samples were mounted in moviol and examined using a Leica DM-IRB confocal microscope.
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8

TUNEL Assay for Apoptosis Detection

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Cell death detection by TUNEL assay was performed following the manufacturer's instructions (Roche). Briefly, after fixation in 4% paraformaldehyde in 0.1 M phosphate buffer (pH 7.4), cryostat brain sections (20 µM) were washed three times in phosphate buffer and incubated for 30 min with a 0.1% sodium citrate, 0.1% Triton X-100 solution to increase tissue permeability. Slides were again washed, and incubated with TUNEL solution for 90 min at 37°C in a humid chamber in the dark. After washing, the slides were incubated with an anti-GFAP antibody (1:2000), in TBS containing 3% BSA and 1% Triton X-100 and left for 48 h at 4°C. The slides were incubated with Alexa Fluor anti-fluorescein-488 and -633-conjugated goat anti-mouse IgG (1:2000; Molecular Probes, Eugene, OR) in blocking buffer, both at a dilution of 1:1000. Finally, after washing, the slides were mounted in Clear Mount (Electronic Microscopy Sciences, Hartfield, PA). Immunofluorescence was visualized directly by using a DM IRB confocal microscope (Leica, Wetzlar, Germany).
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9

Fluorescent Immunohistochemistry for Akt

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Fluorescent immunohistochemistry was performed on frozen 10 mm cryostat sections that were fixed in 4% paraformaldehyde (w/ v) for 20 min, washed, blocked with PBS containing 3% BSA and 1% Triton X-100 for 90 min and incubated 48 h at 4 C with anti-Akt (1:300, Santa Cruz Biotechnology) with blocking buffer. Sections were washed and incubated for 120 min at RT with anti-goat IgG biotin (1:1000, Thermo Scientific) with blocking buffer. Afterwards, sections were washed and incubated under dark conditions with streptavidin Alexa Fluor 488 (1:2000, Molecular Probes, Leiden, The Netherlands) in blocking buffer for 120 min at RT and washed three times with PBS containing 0.1% BSA and 0.1% Triton X-100. Sections were incubated for 5 min at RT with DRAQ5 (1:5000, BioStatus Ltd., Leics, United Kingdom) in PBS, mounted and cover-slipped with Clear Mount (Electronic Microscopy Sciences, Hatfield, PA). Immunofluorescence was visualized with a DM IRB confocal microscope (Leica, Wetzlar, Germany).
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