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29 protocols using coelenterazine h

1

Heterologous LPA Receptor Activation

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To study the activation profile of heterologously expressed LPA receptors, COS-1 cells were seeded in 96-well plates at a density of 50.000 cells/well. Next day, they were co-transfected with plasmids containing cDNA for a calcium-sensitive bioluminescent fusion protein between aequorin and GFP [3 (link)] and plasmids containing the indicated receptor cDNA or control (empty vector, mock) together with the promiscuous Gα15 [42 (link)] at a concentration of 50 ng/well by using FuGENE 6 reagent (Promega) according to manufacturer’s instructions. Forty-eight hours later, cells were loaded with 5 μM coelenterazine h (Invitrogen) in HBSS buffer containing 1.8 mM CaCl2 and 10 mM glucose for 2 h at 37 °C. Measurements were performed by using a luminometric plate reader (Flexstation 3) for 100 s following ligand stimulation. The area under each calcium transient was calculated by using SoftMaxPro software and expressed as area under the curve (AUC). The following lipids were used for stimulation: 1-Palmitoyl-LPA (LPA16:0), 1-oleoyl-LPA (LPA18:1), 1-stearoyl-LPA (LPA18:0), 1-lineoyl-LPA (LPA18:2), 1-arachidonoyl-LPA (LPA20:4). LPA16:0 and 18:1 were from Cayman, the others from AvantiPolar Lipids.
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2

Quantifying NLRP3 Protein Interactions

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HEK293 cells were transfected with a vector encoding for human NLRP3 tagged with luciferase (N-terminus) and YFP (C-terminus)49 (link) using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA) following the manufacturer’s instructions. After 24 h, transfected cells were seeded on a poly-l-lysine-coated white 96-well plate the day before the assay. The BRET signal was read after 5 min of coelenterazine-h (5 μM; Invitrogen) addition. Luminescence was detected at 37 °C in a Synergy Mx plate reader (Biotek) using two filters for 485±20  and 528±20 nm emission. The BRET ratio was calculated as the difference between the 528 and 485 nm emission ratio of R-Luc and YFP-NLRP3 fusion protein and the 530 and 485 nm emission ratio of the R-Luc protein alone. Results are expressed in milliBRET (mBRET) units normalized to the basal signal, as we have previously described.50 (link)
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3

Measuring Cytosolic Calcium in Dictyostelium

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Expression of the Ca2+ sensitive luminescent protein aequorin, in each Dictyostelium, strain was used to measure cytosolic Ca2+ concentration. Dictyostelium cultures were grown and allowed to develop as described previously (Nebl and Fisher, 1997 ). Axenic cultures in HL5 medium were grown to a density of 1–2 × 106 cells ml−1, and 1 × 108 cells were harvested, washed twice in 20 ml of MES-DB [(MES development buffer) (10 mM MES/NaOH, pH 6.2, 10 mM KCl, 0.25 mM CaCl2)], resuspended in MES-DB or HL5 to a final density of 2 × 107 cells ml−1 and loaded with 5 μM Coelenterazine-h (Invitrogen). Cultures were incubated at 21°C shaking at 150 rpm for 4 h (vegetative cells) or 7 h (aggregation competent cells).
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4

Heterologous Expression of G2A in Calcium Imaging

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For studies with heterologously expressed G2A, HEK-293 or COS-1 cells were used. HEK-293 cells were seeded on coverslips and transfected with plasmid containing cDNA for G2A or the empty vector (mock; both obtained from cDNA.org) at a concentration of 1–2 µg DNA/coverslip in DMEM medium containing 10% FCS, 1% penicillin, 1% streptomycin (Invitrogen, Carlsbad, CA, USA) using Turbofect reagent (Thermo Fisher) and following the manufacturer’s instructions. Forty-eight hours later, cells were loaded with FURA-2 (Biotium) for 45 min and measured in calcium imaging experiments as described above.
COS-1 were seeded in white walls-clear bottom 96-well plates and transfected with a plasmid encoding a calcium-sensitive bioluminescent fusion protein between aequorin and GFP52 (link) together with plasmid containing cDNA for G2A or control DNA (empty vector, mock) at a concentration of 50 ng/well by using FuGENE 6 reagent (Promega) following manufacturer’s instructions. Forty-eight hours later, cells were loaded with 5 µM coelenterazine h (Invitrogen) in HBSS containing 1.8 mM CaCl2 and 10 mM glucose for 2 h at 37 °C. Measurements were performed by using a luminometric plate reader (Flexstation 3). The area under each calcium transient was calculated by using SoftMaxPro software and expressed as area under the curve (AUC)53 (link).
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5

BRET Assay for ASC Oligomerization

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HEK293 cells were co-transfected with a vector encoding for mouse ASC tagged with Luciferase (C-terminus) or YFP (C-terminus; Martín-Sánchez et al., 2016b (link)). After 24 h, transfected cells were seeded on a poly-L-lysine-coated white 96-well plate the day before the assay. The BRET signal was read 5 min after the addition of coelenterazine-h (5 μM; Invitrogen). Luminescence was detected at 37°C in a Synergy Mx plate reader (Biotek) using two filters for emission at 485 ± 20 and 528 ± 20 nm. The BRET ratio was calculated as the difference between the 528 and 485 nm emission ratio of R-Luc-ASC and YFP-ASC divided by the difference between the 528 and 485 nm emission ratio of the R-Luc-ASC protein alone. Results are expressed in milliBRET (mBRET) units normalized to basal signal as previously described (Martín-Sánchez et al., 2016a (link)).
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6

Calcium Signaling Assay for Heterologous Receptors

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For studies of heterologously expressed receptors, COS-1 cells were seeded in white walls-clear bottom 96-well plates and transfected with plasmid containing cDNA for a calcium-sensitive bioluminescent fusion protein between aequorin and GFP[14 (link)] and plasmids containing the indicated receptors cDNA or control (empty vector, mock) at a concentration of 50 ng/well by using FuGENE 6 reagent (Promega) following manufacturer’s instructions. Forty eight hours later, cells were loaded with 5 μM coelenterazine h (Invitrogen) in HBSS containing 1.8 mM CaCl2 and 10 mM glucose for 2h at 37°C. Measurements were performed by using a luminometric plate reader (Flexstation 3). The area under each calcium transient was calculated by using SoftMaxPro software and expressed as area under the curve (AUC).
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7

Molecular Techniques for GPCR Studies

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Molecular biology enzymes were obtained from Fermentas (Vilnius, Lithuania) and Stratagene (La Jolla, CA). The cDNA of the human arginine vasopressin receptor 2 was purchased from S&T cDNA Resource Center (Rolla, MO, USA). Cell culture dishes and plates for BRET measurements were purchased from Greiner Bio-One GmbH (Kremsmunster, Austria). Cell culture media, Lipofectamine 2000 and coelenterazine h were purchased from Invitrogen (Carlsbad, CA). Rapamycin was obtained from Merck (Darmstadt, Germany). HEK293 cells were from American Type Culture Collection (Manassas, VA).
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8

GPCR Activation and β-Arrestin Recruitment

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β-arrestin 2 recruitment was determined as previously described [17 (link),36 (link)]. Briefly, BRET experiments were performed in HEK-293T cells 48 h after transfection with the cDNA corresponding to A2AR–YFP or A3R–YFP (0.5 μg cDNA each) and 1 μg cDNA corresponding to β-arrestin 2-Rluc. Cells (20 μg protein) were distributed in 96-well microplates (Corning 3600, white plates with white bottom) and were incubated with antagonists (SCH 442416 for A2AR and/or PSB-10 for A3R) for 15 min and stimulated with agonists (CGS 21680 for A2AR and/or IB-MECA for A3R) for 10 min prior to the addition of 5 μM coelenterazine H (Molecular Probes, Eugene, OR, USA). One minute after coelenterazine H addition, BRET between β-arrestin 2-Rluc and receptor-YFP was determined and quantified. The readings were collected using a Mithras LB 940 (Berthold Technologies, Bad Wildbad, Germany) that allows the integration of the signals detected in the short-wavelength filter at 485 nm and the long-wavelength filter at 530 nm. To quantify protein-Rluc expression, luminescence readings were also performed 10 min after adding 5 μM coelenterazine H.
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9

BRET Saturation Assay for Protein Interactions

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HEK-293 T cells were transiently transfected with a constant amount of cDNA for Rluc fusion proteins and increasing amounts of cDNA for YFP fusion proteins. At 48 h after transfection, 20 μg of cell suspension were plated in 96-well black microplates for fluorescence detection or in 96-well white microplates for BRET readings and Rluc quantification. YFP fluorescence at 530 nm was quantified in a Fluoro Star Optima Fluorimeter as described above. BRET signal was collected 1 min after addition of 5 μM coelenterazine H (Molecular Probes, Eugene, OR, USA) using a Mithras LB 940. The integration of the signals detected in the short-wavelength filter at 485 nm and the long-wavelength filter at 530 nm was recorded. To quantify protein-RLuc expression, luminescence readings were also performed after 10 minutes of adding 5 μM coelenterazine H. The net BRET is defined as (long-wavelength emission/short-wavelength emission)–Cf, where Cf corresponds to long-wavelength emission/short-wavelength emission for the donor construct expressed alone in the same experiment. BRET is expressed as milli-BRET units (net BRET × 1000). To calculate maximum BRET (BRETmax) from saturation curves, data were fitted to a nonlinear regression equation, assuming a single-phase saturation curve with GraphPad Prism software (San Diego, CA, USA).
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10

G Protein-Coupled Receptor Assay

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Oxytocin, carbetocin and arginine vasopressin were obtained from Bachem (Bubendorf, Switzerland). Coelenterazine h was obtained from Molecular Probes, Invitrogen (Carlsbad, CA, USA) and coelenterazine 400a (CLz400) was from Biotium (Hayward, CA, USA).
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