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Alexa fluor 594 conjugated goat anti rabbit antibody

Manufactured by Thermo Fisher Scientific
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The Alexa Fluor 594-conjugated goat anti-rabbit antibody is a secondary antibody designed for use in immunological applications. It is a conjugate of a goat-derived antibody specific to rabbit immunoglobulins and the Alexa Fluor 594 fluorescent dye.

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14 protocols using alexa fluor 594 conjugated goat anti rabbit antibody

1

Immunofluorescent Staining of β-Catenin and Ki-67

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Staining of β-catenin within the skin tissue was performed using a rabbit polyclonal anti– β-catenin antibody (Santa Cruz Biotechnology), Ki-67 (Abcam Inc., Cambridge, UK) and an Alexa Fluor 594-conjugated goat anti-rabbit antibody (Invitrogen). The nuclei within the tissues were counterstained using hematoxylin or 4′,6-diamidino-2-phenylindole (DAPI).
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2

Immunofluorescence Analysis of Lung Cells

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Immunofluorescence analyses of LR-MSCs or lung tissues were performed as described previously [37 (link)]. The following primary antibodies were employed: rat anti-Sca-1, mouse anti-α-smooth muscle actin (α-SMA), rabbit anti-collagen I, mouse anti-CD206, rabbit anti-F4/80, and rabbit anti-Wnt7a. Alexa Fluor 488-conjugated goat anti-mouse antibody, Alexa Fluor 488-conjugated goat anti-rat antibody, Alexa Fluor 594-conjugated goat anti-mouse antibody and Alexa Fluor 594-conjugated goat anti-rabbit antibody (Invitrogen no.A-11001, A-11006, A-11032, and A-11037, respectively, Carlsbad, CA, 1:200 dilution) was used as a secondary antibody. Nuclei were stained with 4′,6-diamidino-2-phenylindole (DAPI) (Sigma no. D9542). The images were observed under confocal fluorescence microscope (Olympus, Tokyo, Japan) with the Z-stack technique (0.8 μm/layer).
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3

Immunofluorescence Staining of Cultured Cells

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On day 1, cells (15,000/well in 384-well clear-bottom black plates) were prefixed with 4% paraformaldehyde (PFA) for 30 min at RT, incubated with anti-FLAG antibody (1:500, polyclonal rabbit anti-Flag, Sigma #F1804), and incubated for 1 hour at room temperature and then overnight at 4°C. On day 2, cells were incubated with Alexa Fluor 594-conjugated goat anti-rabbit antibody (1:200, Invitrogen) and nuclear dye (Hoechst 33342, 1:2000, Invitrogen) for 1 hour at RT in the dark. After thorough washing with PBS (1X PBS, 0.5 mM CaCl2, pH 7.4), cells were post-fixed with 4% PFA for 30 min on ice and stored at 4 °C in the dark. Images were obtained using the BD Pathway Bioimaging System (BD).
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4

Immunofluorescence Analysis of Lung Cells

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Immunofluorescence analysis of cells and lung tissues was performed as described previously 35 (link). For this, the following primary antibodies were employed: rat anti-PDGFRα, mouse anti-α-SMA, rabbit anti-PDGFRα, rabbit anti-PTPN13, and rabbit anti-NOX4. Alexa Fluor 488-conjugated goat anti-mouse antibody and Alexa Fluor 594-conjugated goat anti-rabbit antibody (Invitrogen no. A-11001 and A-11037, Carlsbad, CA, 1:200 dilution) were used as secondary antibodies. Nuclei were stained with DAPI (Sigma no. D9542). The images were observed under an FV3000 confocal laser scanning microscope (Olympus, Tokyo, Japan). For quantification analysis, five high-power fields were analyzed in lung sections taken from each mouse. We then determined the percentages of PDGFRα+, PTPN13+, and NOX4+ cells in total α-SMA+ cells.
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5

Immunofluorescence Staining of Cultured Cells

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On day 1, cells (15,000/well in 384-well clear-bottom black plates) were prefixed with 4% paraformaldehyde (PFA) for 30 min at RT, incubated with anti-FLAG antibody (1:500, polyclonal rabbit anti-Flag, Sigma #F1804), and incubated for 1 hour at room temperature and then overnight at 4°C. On day 2, cells were incubated with Alexa Fluor 594-conjugated goat anti-rabbit antibody (1:200, Invitrogen) and nuclear dye (Hoechst 33342, 1:2000, Invitrogen) for 1 hour at RT in the dark. After thorough washing with PBS (1X PBS, 0.5 mM CaCl2, pH 7.4), cells were post-fixed with 4% PFA for 30 min on ice and stored at 4 °C in the dark. Images were obtained using the BD Pathway Bioimaging System (BD).
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6

Immunofluorescence Imaging of Microtubules

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Cells were treated with 3 µM FMC for 12 h and processed for immunofluorescence using a monoclonal antibody against α-tubulin.
Briefly, after treatments cells were pelleted by centrifugation at 500 × g for 10 min, washed with PBS and adhered by cytocentrifugation on microscope slides. Adherent cells were fixed for 10 min at room temperature with 3% paraformaldehyde, washed once with PBS for 5 min, then 0.1 M glycine for 5 min at room temperature, followed with PBS, permeabilized (0.25% Triton X-100), washed with PBS and blocked with 5% BSA and 5% normal goat serum in PBS containing 0.025% Triton X-100 for 1 h. After washing twice with PBS, cells were incubated with 1% BSA in PBS containing 0.025% Triton X-100 containing anti-α-tubulin monoclonal antibody (#2125, Cell Signaling Technology, 1:100 dilution) overnight at 4 • C. After washing with PBS, cells were incubated with Alexa Fluor 594-conjugated goat anti-rabbit antibody (Invitrogen, 1:1,000 dilution) in the dark for 90 min. Then, cells were rinsed with PBS and mounted with Vectashield mounting medium (Vector Laboratories, Burlingame, CA, USA) containing DAPI (4 ′ ,6-diamidino-2-phenylindole, 1.5 µg/mL). Cellular microtubules images were obtained by using an inverted Nikon Eclipse 80i microscope with a 40x objective.
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7

Immunofluorescence Analysis of LR-MSCs and Lung Tissues

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Immunofluorescence analyses of LR-MSCs and lung tissues were performed as described previously [32] . The following primary antibodies were employed: rabbit anti-Wnt10a, rat anti-Sca-1, mouse anti-α-smooth muscle actin (α-SMA), and rabbit anti-collagen I. Alexa Fluor 594-conjugated goat anti-rabbit antibody, Alexa Fluor 488-conjugated goat anti-mouse antibody, and Alexa Fluor 647-conjugated goat anti-rat antibody (all from Invitrogen) were used as secondary antibodies. Nuclei were stained with 2 mg/ml 4′,6-diamidino-2phenylindole (Sigma). Images were acquired using a confocal fluorescence microscope (Olympus, Tokyo, Japan).
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8

Immunohistochemical Analysis of Retinal Cells

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Anesthetized mice were perfused with 20 mL of PBS. Eyes were enucleated and fixed in 4% paraformaldehyde in 2× PBS for 15 min and then transferred to 2× PBS on ice for 10 min. After dissecting eyes, retinal whole mounts were prepared. Retinas were then transferred to ice-cold methanol and kept at −80 °C until use.
For immunohistochemistry, retinas were first blocked in a blocking buffer (0.3% Triton, 0.2% BSA, and 5% goat serum in PBS) for 1 h at room temperature and incubated with primary antibodies and Alexa Fluor 647-conjugated isolectin GS-B4 (1:100; Thermo Fisher Scientific) overnight at 4 °C. After washing, retinas were incubated with secondary antibodies for 4 h at 4 °C. Retinas were mounted after washing. Rabbit anti-P2ry12 antibody (1:500; a gift from H. Weiner, Brigham and Women’s Hospital), rat anti-CD11b antibody (1:100, clone M1/70; Abcam), rat anti-MHC class II (1:1,000, I-A/I-E; BD Pharmingen), rat anti-CD4 (1:200, RM4-5; BD Pharmingen), and rat anti-CD8a (1:200, 53-6.7; BD Pharmingen) were used for primary antibodies. Alexa Fluor 594-conjugated goat anti-rabbit antibody, and Alexa Fluor 488-conjugated goat anti-rat antibody (1:500; Thermo Fisher Scientific) were used for secondary antibodies.
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9

Immunofluorescence Imaging of ACE2 in Mouse Embryonic Hearts

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Fixed mouse embryonic hearts (immersed in 30% sucrose) were frozen in embedding medium (OCT embedding matrix; Leica Microsystems, Mannheim, Germany) at −80° C. The mouse hearts were sectioned using a Leica Cryo-microtome (Leica CM 1800; Leica, Germany). The cryosections were washed in PBS, and the thickness of the sections was 13-14 μm. For immunofluorescence, we used the protocol published in [28 (link)]. The primary antibody was anti-ACE2 (#ab15348; Abcam, UK). As the secondary antibody, we used Alexa Fluor 594-conjugated goat anti-rabbit antibody (#A11037 ThermoFisher Scientific, Czech Republic). DNA was counterstained using 4′,6-diamidino-2-phenylindole (DAPI; Merck, Czech Republic), and the mounting medium was Vectashield (#H-1000, Vector Laboratories, USA).
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10

Quantifying Microtubule Dynamics in Cancer Cells

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BE(2)‐C and Kelly cells were transfected with control siRNA, CEP55 siRNA‐1, or CEP55 siRNA‐2 for 72 h in Lab‐Tek™ Chamber slides (Thermo Fisher Scientific). In separate experiments, BE(2)‐C or Kelly cells containing DOX‐inducible control shRNA, DDX21 shRNA‐1, or DDX21 shRNA‐2 were plated in Lab‐Tek™ Chamber slides for 24 h, then treated with vehicle control or DOX every 24 h for a total of 72 h. Cells were then fixed in 4% paraformaldehyde for 15 min, permeabilized with 0.2% Triton X‐100, blocked with 10% FBS, and probed with Alexa Fluor 647 phalloidin (Thermo Fisher Scientific), or rabbit anti‐α‐tubulin antibody (Abcam) and Alexa Fluor 594‐conjugated goat anti‐rabbit antibody (Thermo Fisher Scientific) and DAPI (Vector Laboratories, Burlingame, CA, USA).
Images were taken under a confocal fluorescence microscope (Leica TCS SP8, Wetzlar, Germany), and α‐tubulin filaments were quantified by dividing the area of α‐tubulin filaments by the area of the nucleus for each cell. These analyses were done using a custom‐built MATLAB code, which first converted the images into binary images. The binary mask was cleaned by morphological operations using the MATLAB built‐in operation of structuring element, dilation, and erosion [24].
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