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11 protocols using horseradish peroxidase labeled goat anti rabbit igg h l

1

Western Blot Analysis of Protein Expression

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Cells were lysed, and the total protein was extracted using a whole protein extraction kit (cat. no. KGP2100; KeyGEN BioTECH, Nanjing, China). The protein concentration was measured using a BCA Protein Assay Kit (cat. no. KGP902, KeyGEN BioTECH). Twenty micrograms of protein was separated by SDS/PAGE and transferred onto poly(vinylidene difluoride) membranes (Merck Millipore, Billerica, MA, USA), which were followed by incubating with 10% non‐fat milk at room temperature for 1.5 h. Then the membranes were incubated with the corresponding primary antibodies overnight at 4 °C followed by incubating with secondary horseradish peroxidase‐labeled goat anti‐rabbit IgG(H + L) or horseradish peroxidase‐labeled goat anti‐mouse IgG(H + L) (Beyotime, Beijing, China) for 1 h at room temperature. An ultra‐sensitive ECL chemiluminescence kit (Beyotime) was used to detect the signal on a Tanon 5200 machine (Tanon, Shanghai, China).
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2

Protein Expression Analysis by Western Blot

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Protein (30 μg/group) were separated with SDS-PAGE gel, and transferred to Polyvinylidene Difluoride (PVDF) membrane, followed by fixing with 5% skim milk and by incubating first antibodies at 4 °C overnight, and the second antibody at room temperature for 1 h. Finally, use a developer for imaging. First antibodies used in our study are anti-PD-L1 (1:1000), anti-b-cell lymphoma 2 (Bcl-2) (1:1000), anti-Bcl-2 related X protein Bax (1:1000), anti-Bad (1:1000), anti-cyclin D1 (1:1000), anti-Cyclin B (1:1000), and internal reference GAPDH (1:2000). Second antibodies are horseradish peroxidase labeled goat anti mouse IgG (H + L) (Beyotime, A0216), and horseradish peroxidase labeled goat anti rabbit IgG (H + L) (Beyotime, A0208).
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3

Western Blot Analysis of Protein Extraction

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Cells were lysed and whole protein was extracted using whole protein extraction kit (cat. no. KGP2100; KeyGEN BioTECH, Nanjing, China). The protein concentration was measured by BCA Protein Assay Kit (cat. no. KGP902; KeyGEN BioTECH). Twenty micrograms of protein was separated by SDS/PAGE and transferred onto poly(vinylidene difluoride) membranes (Merck Millipore, Billerica, MA, USA) followed by incubation with 10% non‐fat milk at room temperature for 1.5 h. Then, the membranes were incubated with the corresponding primary antibodies overnight at 4 °C followed by incubation with the secondary horseradish peroxidase‐labeled goat anti‐rabbit IgG(H+L) or horseradish peroxidase‐labeled goat anti‐mouse IgG(H+L) (Beyotime, Beijing, China) for 1 h at room temperature. An ultra‐sensitive ECL chemiluminescence kit (Beyotime) was used to detect the signal on a Tanon 5200 machine (Tanon, Shanghai, China).
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4

Western Blot Analysis for Biomarker Detection

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For Western blot, the samples were separated on a 10% SDS-PAGE gel and transferred to a nitrocellulose filter membrane. The membrane was blocked for 1 h with 5% non-fat dried milk (w/v) prepared in PBST (in μmol/L: 135 NaCl, 2.7 KCl, 1.5 KH2PO4, 8 K2HPO4, pH 7.2, 0.05% (v/v) Tween 20). After washing with PBST, the membrane was incubated with the primary antibody in PBST containing 2% bovine serum albumin at 4°C overnight. After three washes with PBST, the secondary antibody was applied at room temperature for 1 h. After three washes with PBST, the membranes were scanned using an Odyssey infrared imaging system (LI-COR Biosciences, USA). Aβ42 (Bioss, BS0107R, 1:1000); p-Tau (Affinity, AF3148, 1:1000); S100β (Affinity, DF6116, 1:1000); NSE (Affinity, AF5473, 1:1000); APJ (Affinity, DF13350, 1:1000); VEGF (Affinity, AF5131, 1:1000); GAPDH (Affinity, AF7021, 1:5000). Horseradish peroxidase labeled goat anti-rabbit IgG (H + L) (Beyotime Biotech Inc., China, A0208, 1:10000); Horseradish peroxidase labeled goat anti-mouse IgG (H + L) (Beyotime Biotech Inc., A0216, 1:10000).
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5

Western blot analysis of stem cell markers

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Our study homogenized cells in ice-cold lysis buffer and centrifuged at 12,000×g for 20 min and at 4 °C. Lysates (50 μg protein/lane) went through separation by 12 % sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transfer to polyvinylidene fluoride membranes (Bio-Rad, Hercules, CA. USA). Subsequently, we blocked the membranes utilizing 5 % BSA for 1 h, cut them per each protein molecular weight, and incubated them incubation at 4 °C with the corresponding primary antibodies for a whole night. Our study employed these primary antibodies: anti-LGR5 antibody (ab75850, Abcam), anti-CD133 (ab284389, Abcam), anti-ac4C (ab252215, Abcam), anti-beta Actin (ab8226, Abcam), and anti-NAT10 (ab194297, Abcam) antibodies. Subsequently, the membranes were investigated utilizing horseradish peroxidase-labeled goat anti-rabbit IgG (H + L) (A0208, Beyotime, Jiangsu, China) at room temperature for 2 h employing an enhanced chemiluminescence reagent (Millipore, Billerica, MA, USA), we visualized protein bands per the protocols. ACTB was utilized as a loading control, performing protein expression quantification using densitometry.
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6

Quantification of E-Cadherin Expression in Intestinal Tissue

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To determine the protein expression level of E-cadherin, the intestinal ileum tissue was extracted and lysed in 200 μl of RIPA buffer containing protease inhibitors (Beyotime, Shanghai, China) on the ice for 5 mins. Both the infected group and the control group contained 4 mouse samples at each time point. The lysed tissue was then homogenized using a tissue crusher and centrifuged at 15000 rpm, 4˚C for 10 mins. The protein concentration was measured using the BCA method (Beyotime). Samples were resolved by SDS-PAGE using 50 μg of protein each and transferred onto nitrocellulose membranes. The membranes were blocked with 5% skimmed milk and then probed with E-cadherin (Abmart) diluted in 1:1000, followed by horseradish peroxidase labeled goat anti-rabbit IgG (H+L) diluted in 1:1000 (Beyotime). The membranes were analyzed using the Super Signal West Pico Chemiluminescent Substrate Kit (ThermoFisher) and were scanned on the UVP ChemStudio PLUS Imager (Analytikjena).
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7

Exploring miRNA-Driven Molecular Mechanisms

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All-in-One™ miRNA first-strand cDNA synthesis kit, All-in-One™ miRNA qPCR detection kit and all quantitative (q)PCR primers were purchased from GeneCopoeia, Inc. Primerscript™ RT reagent kit with gDNA eraser and SYBR premix Ex Taq II were obtained from Takara Biotechnology Co., Ltd. 3-(4,5-Dimethylthiazol-2-yl)-2,5- diphenyltetrazolium bromide (MTT) was purchased from Beyotime Institute of Biotechnology. The cell culture media, including RPMI-1640 medium and DMEM, were obtained from Corning Inc. Fetal bovine serum (FBS) was purchased from Clark Bioscience. All primary antibodies, including those against E-cadherin (3195), β-catenin (8480), vimentin (5741), Twist1 (46702) and GAPDH (5174) were purchased from Cell Signaling Technology, Inc. The secondary antibody used was horseradish peroxidase-labeled goat anti-rabbit IgG (H+L; A0208) obtained from Beyotime Institute of Biotechnology. Berberine hydrochloride was purchased from Shanghai YuanYe Biotechnology Co., Ltd. Metformin and rapamycin were purchased from Selleck Chemicals. Propranolol was obtained from Sigma-Aldrich (Merck KGaA), LY294002 was ordered from Beyotime Institute of Biotechnology, and TOFA was purchased from Santa Cruz Biotechnology, Inc.
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8

Evaluation of Selenium-Enriched Soybeans

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Selenium-enriched soybeans were purchased from Enshi Se-Run Health Tech Development Co., Ltd. (Enshi city, China), while L-SeMet was obtained from Shanghai Macklin Biochemical Co., Ltd. Na2SeO3 was purchased from Sigma Chemical Co. (St. Louis, MO, United States). Xi’an Ruidi Biotechnology Co., Ltd., supplied the honeysuckle extract. The alanine aminotransferase (ALT), aspartate aminotransferase (AST), catalase (CAT), superoxide dismutase (SOD), malondialdehyde (MDA), GSH, and GSH-Px kits were obtained from Nanjing Jiancheng Bioengineering Institute. The IL-1β, IL-6, TNF-α, GSH, and GSH-Px ELISA kits were acquired from Jiangsu Meibiao Biotechnology Co., Ltd., while the BCA protein concentration assay kit was purchased from Beijing Solarbio Science & Technology Co., Ltd. The skim milk powder was supplied by Becton, Dickinson, and Company. Furthermore, the PVDF membrane, TBST, NF-κB p65 rabbit monoclonal antibody, phospho-IκBα (Ser32/36) rabbit polyclonal antibody, α-Tubulin rabbit polyclonal antibody, horseradish peroxidase-labeled goat anti-rabbit IgG (H + L), Western secondary antibody dilution, and BeyoECL Star (extra super-sensitive enhanced chemiluminescence kit) were purchased from Beyotime Biotechnology.
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9

Membrane Protein Characterization by SDS-PAGE

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The membrane proteins were characterized by polyacrylamide gel electrophoresis (SDS-PAGE). The membrane proteins of the MM vesicles and MM/RAPNPs were extracted by Cell Total Protein Extraction kits. The extracted membrane proteins were run on a 4-12% Bis-Tris 10-well minigel in running buffer using a Bio-Rad electrophoresis system at 75 V for 0.5 h and then at 140 V for 1 h. Finally, the resulting polyacrylamide gel was stained with SimplyBlue overnight for visualization.
Furthermore, the integrin α4β1 and CD47 contents in RAW264.7 cells, MMs, MM/RAPNPs and RAPNPs were determined by western blot analysis. The total protein of the lysis solution from 1 × 107 RAW264.7 cells, RAPNPs, MMs extracted from 1 × 107 cells and the subsequent MM/RAPNPs were extracted by Cell Total Protein Extraction kits and used for measurements. Samples underwent electrophoresis on a 10% SDS-polyacrylamide gel and were transferred to a polyvinylidene difluoride membrane (Millipore, USA). Then, the membranes were treated with primary antibodies against α4 (anti-integrin α4, 8440S, CST), β1 (anti-integrin β1, 34971, CST), and CD47 (anti-CD47 antibody, ab175388, Abcam), followed by horseradish peroxidase-labeled goat/anti-rabbit IgG (H+L) (Beyotime, Jiangsu, China). The protein signals were measured by the enhanced chemiluminescence method using a ChemiDoc MP imaging system (Bio-Rad, USA).
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10

Quantitative Western Blot Analysis

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Protein lysates from the cell lines were prepared in lysis buffer and centrifuged at 4 °C and 12 000 g. Western blotting was performed according to a previously described procedure (Ye et al., 2015) using rabbit anti‐human IgG1 (ABIN2862696), anti‐human CD47 (ab108415; Abcam, Cambridge, England), anti‐coxsackie adenovirus receptor (CAR; ab100811; Abcam, Cambridge, England), and anti‐CD46 antibody (ab108307; Abcam, Cambridge, England) as the primary antibodies. The secondary antibody was horseradish peroxidase‐labeled goat anti‐rabbit IgG (H+L) (Beyotime, Shanghai, China). The expression of each band was quantitatively analyzed using the image lab™ software (Bio‐Rad, CA, USA).
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