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7 protocols using cd86 clone it2.2

1

Modulation of Monocyte Phenotype by IL-10

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Peripheral blood mononuclear cells (PBMCs) were isolated from buffy coats obtained from healthy donors (Oklahoma Blood Institute). Monocytes were enriched from PBMCs using magnetic bead separation (Miltenyi Biotech). Purity was >90% by flow cytometry and viability was >99% by trypan blue exclusion post enrichment. Monocytes were stimulated with 10 ng/ml recombinant hIL-10 (Peprotech) or recombinant vIL-10 (R&D systems) for indicated times. STAT3 phosphorylation was detected by flow cytometry using antibodies directed against phospho-STAT3 Y705 (BD Biosciences). To inhibit signaling through IL-10R, monocytes were stimulated with hIL-10 or vIL-10 in the presence or absence of a neutralizing antibody to IL-10R1 (Clone: 37607, R&D systems), and STAT phosphorylation was measured as above. To differentiate monocytes into macrophages, cells were cultured with 50 ng/ml M-CSF (R&D systems). On day 6 cells were additionally stimulated with IFNγ (20 ng/ml, Peprotech), IL4 (20 ng/ml, Peprotech), hIL-10 (10 ng/ml), or vIL-10 (10 ng/ml) for 24 h. Surface markers were stained using following antibodies: CD14 Clone M5E2, CD163 Clone GHI/61, CD32 Clone FLI8.26 (BD Biosciences), CD16 Clone 3G8, CD64 Clone 10.1, HLA-DR Clone LN3, CD86 Clone IT2.2 (BioLegend). Cells were acquired on BD LSR II or BD Celesta (BD Biosciences) and data were analyzed using FlowJo (TreeStar, v10).
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2

Antibody Reagents for Cell Signaling

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Antibodies to the following proteins were purchased from the indicated vendors: mouse IgG1 Kappa (clone MOPC21) Sigma-Aldrich (St. Louis, MO, USA). CD137L (clone 5F4) Biolegend (San Diego, CA, USA). CD3 (clone OKT3), CD40 (clone 5C3) and PD-L1 (clone M1H1) Affymetrix eBioscience (San Diego, CA, USA). CD80 (clone 2D10), CD86 (clone IT2.2) and CD70 (clone 113-16) Biolegend. Phospho-Akt (Ser473) (clone D9E), Pan-Akt (clone 40D4), Phospho-S6 Ribosomal Protein (Ser235/236), S6 Ribosomal Protein (clone 54D2), Phospho-p44/42 MAPK (Erk1/2, Thr202/Tyr204), p44/42 MAPK (Erk1/2, clone L34F12), phospho-AMPKα (Thr172, clone 40H9), AMPKα (clone F6), phospho-GSK-3β (Ser9, clone D85E12), GSK-3β (clone 3D10), rabbit IgG-HRP, mouse IgG-HRP, beta-actin (clone 13E5), and PathScan® Intracellular Signaling Array Kit from Cell Signaling Technology (Danvers, MA, USA). GAPDH (clone 6C5) Abcam (Cambridge, UK). LY294002 and Rapamycin from Cell Signaling Technology. DMSO, 2-DG, C75, and TOFA from Sigma-Aldrich.
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3

AMG 330 Cytotoxicity Assay with T-cells

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For experiments with AMG 330, cells were incubated at 37 °C (in 5% CO2 and air) in 96-well round bottom plates (BD Falcon) at 5–10 × 103 cells/well in culture medium containing various concentrations of the BiTE antibody construct (kindly provided by Amgen, Amgen Research GmbH, Munich, Germany) as well as T-cells at different E/T cell ratios.8 (link) In some experiments, blocking PD-L1 (clone 29E.2A3),14 (link) PD-L2 (clone MIH18)15 (link) or CD86 (clone IT2.2)16 (link) antibodies, or an activating CD28 (clone CD28.2; all from BioLegend, San Diego, CA, USA) antibody were added at 1 μg/ml. After 48 h, cell numbers and drug-induced cytotoxicity, using 4′,6-diamidino-2-phenylindole (DAPI) to detect nonviable cells, were determined using a LSRII cytometer (BD Biosciences, San Jose, CA, USA) and analyzed with FlowJo (Tree Star, Ashland, OR, USA). Leukemic cells were identified by forward/side-scatter properties and negativity for CellVue Burgundy dye.8 (link) For experiments with other cytotoxic agents, tumor cell lines were incubated in medium containing various concentrations of cytarabine or mitoxantrone (Sigma-Aldrich, St Louis, MO, USA) for 72 h, after which cell numbers and drug-induced cytotoxicity were quantified by flow cytometry.
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4

Multiparametric Flow Cytometry Analysis

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Following BFA treatment for the final 4 h, cells were resuspended in 1:1000 dilution of Fixable Viability Stain (Life Technologies, Gloucester, UK) for LIVE/DEAD cell determination. Cells were subsequently resuspended in PBS with 1% BSA (Sigma-Aldrich) and treated with Fcγ block (Life Technologies). For extracellular cell staining, cells were labelled with fluorochrome-conjugated Abs against CD3 (clone OKT3; Life Technologies), CD69 (clone FN50; BD Biosciences, Wokingham, UK), CD86 (clone IT2.2; Biolegend), DC-SIGN (clone eB-h209; Life Technologies) and CD107a (clone H4A3; Biolegend). Cells were then fixed and permeabilized using the FIX and PERM Kit (Life Technologies) before intracellular staining with fluorochrome-conjugated Abs against IFNγ (clone 4S.B3; Biolegend), IL-17A (clone eBIO64 DEC17; Life Technologies), Granzyme B (clone GB11; Biolegend), perforin (clone B-D48; Biolegend), granulysin (clone DH2; Biolegend), and granzyme A (clone CB9; Biolegend). For apoptosis analysis, cells were stained with Abs against Annexin V (Biolegend) and with propidium iodide (PI) (Biolegend) before immediate acquisition. Flow cytometric data were acquired with a BD LSRFortessa (BD Biosciences) and analysed using FlowJo v10.6.2 (Treestar, Ashland, OR, USA). Fluorescence minus one controls were used for the setting of gates.
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5

Multiparameter flow cytometry analysis of immune cells

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The following antibody clones were used for staining the cells:
DCs: Lineage FITC, HLADR PerCP (clone L-243), CD11c APC (cloneBu15), CD123 BV421 (clone 6H6), CD86 (clone IT2.2), and CD14 BV650 (cloneM5E2) were obtained from BioLegend (San Diego, CA). Live/Dead Fixable Viability Stain 510 was from BD Pharmingen (San Jose, CA, USA).
CD8T: CD8 PerCP (clone-SK1), perforin FITC (cloneB-D48), CD107aPE (clone H4A3), and granzyme B AL647 (clone GB11) were obtained from BioLegend.
Viruses: Virus-irradiated and heat-inactivated SARS-CoV-2 Isolate USA-WA1/2020 and control irradiated Vero cell lysate were obtained from Bei Resources (NIAID). As per the BEI Resources, gamma irradiation was performed using (5 × 106 RADs) on dry ice, and heat inactivation was performed by heating to 65°C for 30 min. The inactivated viruses are biosafety level 1. The institutional biosafety protocol (IBC) number is 2008-1243.
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6

Quantification of Fluorescence Intensities

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For quantification of fluorescence intensities, 10 sets of phase-contrast and fluorescence images were randomly acquired for each experimental condition, using the 40× objective (at least 500 cells per experimental condition). The fluorescence background was subtracted, and a threshold was applied to only measure the cell-associated fluorescence. The number of nuclei (Nn) and the integrated fluorescence intensity (If) were automatically measured using Metamorph software. Fluorescence intensity per cell was calculated using the formula (If/Nn) in each plane, and the results were averaged. Data were shown as average fluorescence intensity (AFI)/nucleus ± SEM (Fig. S4 shows a representative experiment of n = 3 independent experiments from 3 placentas). The antibodies were against CD80 (clone 2D10; Biolegend), CD86 (clone IT2.2; Biolegend), CD163 (clone GHI/61; Thermo Fisher Scientific), CD206 (clone 15-2; Biolegend), CD209 (clone 9E9A8; Biolegend), and CD14 (clone 63D3; Biolegend).
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7

Multiparametric Phenotyping of Dendritic Cells

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Surface staining of DC for CD14 (clone M5E2, BioLegend), CD80 (clone 2D10, BioLegend), CD83 (clone HB15e, BioLegend), CD86 (clone IT2.2, BioLegend), HLA-DR (clone L243, BioLegend), CCR7 (clone 150503, BD Biosciences), IL-15Rα (clone JM7A4, BioLegend), IL-15 (clone 34559, RD Systems), PD-L1 (clone MIH1, BD Biosciences), CD40 (clone 5C3, BD Biosciences), CD206 (clone 15-2, Biolegend), and DC-SIGN (clone 9E9A8, Biolegend) was performed for 20 min in the dark in PBS with HSA (1%) at 4 °C. Antibody concentration had been titrated for optimal signal-to-noise ratio. Data were acquired on a NovoCyte (ACEA Biosciences) or a BD™ LSR II (BD Biosciences) and analyzed using FlowJo Software (TreeStar) as geometric MFI or percent positive cells.
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