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3 protocols using anti gpx1

1

Protein Extraction and Analysis Protocol

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Common reagents, bovine serum albumin (BSA), streptavidin-agarose beads, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), and anti-HDAC1 antibody were purchased from Sigma-Aldrich (St. Louis, MO, USA). Cell culture supplies, fetal bovine serum (FBS), Lipofectamine 2000, and anti-SUMO1 antibody were purchased from Thermo Fisher Scientific (Waltham, MA, USA). Polyvinylidene difluoride (PVDF) membrane was purchased from Bio-Rad Laboratories (Hercules, CA, USA). Ultra ECL-HRP Substrate and the EasyPrep plasmid extraction kit were purchased from Biotools Co., Ltd. (Taipei, Taiwan). The Dual-Luciferase Reporter (DLR) Assay System was purchased from Promega (Madison, WI, USA). Anti-Sp1, anti-actin, anti-HDAC2, and anti-HDAC3 antibodies were purchased from Millipore (Billerica, MA, USA). Anti-acetyl-lysine, anti-SOD1, anti-SOD2, anti-catalase, anti-Prx3, and anti-GPx1 antibodies were purchased from Genetex Inc. (Irvine, CA, USA). Anti-p53, anti-phospho-p53 (Ser15), anti-acetyl-lysine, and anti-HDAC6 antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). Anti-Nrf2 and horseradish peroxidase (HRP)-conjugated anti-mouse and HPR-conjugated anti-rabbit antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The anti-Znf179 antibody was described previously [6] (link).
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2

Protein Expression Analysis in Cultured SGNs

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After the drug treatment, the proteins from the cultured SGNs were extracted with radioimmunoprecipitation assay buffer (RIPA) buffer (Protein Biotechnology, China). The mixture was centrifuged at 4°C and 12,000 × g in a refrigerated centrifuge and the supernatant was collected. A total of 30 μg of each protein sample was denatured and separated by 12% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE) gels. The primary antibodies were anti-GPX1 (1:1,000 dilution, GeneTex, GTX116040), anti-C-caspase 3 (1:500 dilution, Cell Signaling Technology, 9664), anti-4-HNE (1:1000, Abcam, ab46545), anti-phosphorylated (p)-NFκB p65 (1:1,000 dilution, Cell Signaling Technology, 3033), and anti-β-actin (1:2,000 dilution, ZSGB-BIO, TA-09). The protein signals were detected using an ECL kit (Millipore, United States) and analyzed by Image J software. The relative optical density ratio was calculated by comparison to β-actin.
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3

Immunohistochemical Analysis of Cochlear Tissues

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After organotypic culture or cryosection, the cochlear explants or tissue sections were fixed with 4% PFA, permeabilized with 1% TritonX-100 in PBS, and blocked by incubation in PBT-1 solution (0.1% Triton X-100, 8% donkey serum, 1% bovine serum albumin, and 0.02% sodium azide in PBS) at room temperature for 1 h. The samples were then incubated with the following primary antibodies: anti-Tuj 1 (1:1,000 dilution; Neuromics, MO15013), anti-GPX1 (1:500 dilution, GeneTex, GTX116040), anti-C-caspase 3 (1:400 dilution, Cell Signaling Technology, 9664), anti-NeuN (1:500, Cell Signaling Technology,12943), anti-4-HNE (1:500 dilution, Abcam, ab48506, United States), or anti-NF-κB p65 (1:500 dilution, Cell Signaling Technology, 6956) diluted in the blocking solution at 4°C overnight. The next day, samples were incubated with FITC-conjugated, TRITC-conjugated, or Cy5-conjugated (1:1000, Invitrogen, United States) secondary antibody along with 4′,6-diamidino-2-phenylindole (DAPI) (1:1000, Sigma-Aldrich, United States) at room temperature for 1 h. Then, coverslips were mounted and the samples were observed under a laser scanning confocal microscope (Leica SP8; Leica, Germany).
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