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Ninhydrin

Manufactured by Merck Group
Sourced in United States, Germany, United Kingdom, India, Japan, Italy, Poland

Ninhydrin is a chemical reagent used in forensic science and analytical chemistry. It is a white crystalline solid that reacts with primary amines, such as amino acids, to produce a colored compound that can be used for the detection and identification of these compounds. The core function of Ninhydrin is to facilitate the visualization and analysis of amino acids and other primary amines.

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148 protocols using ninhydrin

1

Colorimetric Assay for Citrulline Ureidase Activity

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We determined the activity of F. tularensis using a color test with ninhydrin [26 (link)] based on ability of citrulline ureidase to degrade citrulline to ornithine, which, on reaction with ninhydrin reagent gives a pink coloration [27 (link)].
A 1.0-ml sample of bacterial suspension (1010 bacteria) in 0.1 M phosphate buffered saline (PBS, pH 6.5) was mixed with 1.0 ml of 0.7% (w/v) l-citrulline (Sigma Chemical Co., St. Louis, MO, USA) and incubated for 20 h at 30°C. An aliquot (0.01 ml) of the mixture was removed and added to 0.49 ml of distilled water, 1.0 ml of freshly prepared ninhydrin reagent (625 mg of ninhydrin [Sigma] in 10 ml of 6 M H3PO4 and 15 ml of glacial acetic acid), and 1.5 ml of acetic acid. Samples were boiled for 1 h, and pink colored samples were considered to have citrulline ureidase activity.
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2

Quantifying Arginase Activity in Plasma

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Plasma from HDs and SFT patients was tested for arginase activity by measuring the production of L-ornithine from L-arginine, as previously reported (Rodriguez et al, 2004 (link)). In brief, a mix of 25 μl of plasma and 25 μl of buffer (Tris-HCl 50 nM pH 7.5 plus 10 mM MnCl2, Sigma-Aldrich) was heated at 55 °C for 20 min. Then, 150 μl carbonate buffer (100 mM; Sigma-Aldrich) and 50 μl L-arginine (100 mM; Sigma-Aldrich) were added and the mix incubated at 37 °C for 20 min. The hydrolysis of L-arginine was stopped with 750 μl of glacial acetic acid. In all, 250 μl of ninhydrin solution (2.5 g ninhydrin (Sigma-Aldrich); 40 ml H3PO4 6 M; 60 ml glacial acetic acid) was added followed by incubation at 95 °C for 1 h. The amount (nmol) of L-ornithine was determined measuring the absorbance at 570 nm.
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3

Quantifying Surface Amine Groups via Ninhydrin Assay

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The concentration of surface amine groups was measured using a novel ninhydrin assay, allowing both visualisation and quantification. A clean glass coverslip was submerged in a 0.1 M silane solution for 30 min to apply the –NH2 coating as detailed above. A control untreated coverslip was also used. Subsequently, 1 mL ninhydrin solution (0.35 g of ninhydrin (Sigma, UK) dissolved in 100 mL of ethanol) was added to the materials (including the untreated material) and then heated to 90 °C in an oven for 5 min. The solution was removed from the coverslips and diluted 1:3 with ethanol and then absorbance at 600 nm measured against the untreated control blank. The change in colour of the solution from yellow to purple due to the presence of amine was quantified by reference to a standard curve (ranging from 20 to 120 μM). The coverslips were imaged and photographed using transmitted light microscopy after removal of the ninhydrin reagent to visualise the distribution of the amine groups across the surfaces as purple staining. The concentration of –NH2 group deposition was calculated from the loss of amine concentration from the coating solution.
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4

Ninhydrin Colorimetric Analysis of Hydrogel Amino Groups

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The ninhydrin (2,2-dihydroxy-1,3-indenedione) reagent (Sigma-Aldrich) was used to study the residual amino groups because ninhydrin can react with amines and amino acids in colorimetric analysis. The residual amino groups were measured at the optical density wavelength of 570 nm (OD570) of the hydrogels before and after their cross-linking in an enzyme-linked immunosorbent assay (ELISA) microplate reader (EZ Read 400, Biochrom, Cambridge, UK). All hydrogel scaffolds (0.01 g) were soaked in ddH2O at 37 °C for 1 h. Then, 1 mL of the extract and 0.5 mL ninhydrin were mixed uniformly, and the mixture was placed in a boiling water bath for 10 min to accelerate the reaction. Subsequently, the OD570 was measured. After adding different contents of the cross-linker EDAC/CaCl2, the fixation indexes of the hydrogel were compared as follows [61 (link)]: Fixation index %=(amine-reactive)fresh(amine-reactive)fixed(amine-reactive)fresh×100%
The free amine before cross-linking is (amine-reactive)fresh, and the free amine group after cross-linking is (amine-reactive)fixed.
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5

Chemical Profiling of Subfractions

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To estimate the chemical profile of the subfractions under study, normal- and reverse-phase thin-layer chromatography (TLC) assays were performed using commercially available standards (rutin, quercetin, glucose, glycine, alanine, serine, valine, leucine, asparagine, aspartic acid, lysine, glutamic acid, and arginine). The systems dichloromethane:methanol (7:3 v/v), ethyl acetate:methanol:water:glacial acetic acid (7:2:2:0.5 v/v/v/v), and n-butanol:acetone:glacial acetic acid:water (35:35:10:20 and 70:70:20:10 v/v/v/v) were used as solvents for normal-phase TLC, while water:acetonitrile (7:3 v/v) was used for reverse-phase TLC. Once the plates were developed, spots were visualized with 4-hydroxybenzaldehyde (Merck, Darmstadt, Germany) and aminoethanol dimethylborate (Sigma-Aldrich, St. Louis, MO, USA) for flavonoids, and ninhydrin (Merck) for amino acids, following the supplier’s directions.
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6

Antimicrobial Peptide Synthesis and Evaluation

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L. monocytogenes ATCCbaa751 and E. coli ATCC25922, were obtained from the American Type Culture Collection (ATCC; Rockville, MD, USA). NovaPEG Rink Amida resin, Fmoc-protected amino acids, 2-(1H-benzotriazole-1-yl)-1,1,3,3-tetramethyluronium tetrafluoro-borate (TBTU), Piperidine, N,N-Diisopropylethylamine (DIEA), Ninhydrin, Dimethylformamide (DMF), Trifluoroacetic acid (TFA), 1,2-Ethanedithiol (EDT), Triisopropylsilane (TIS) and Mueller Hinton Broth (MHB) were purchased in Merck (Darmstadt, Germany). Cholesterol, Epikuron 200® and dioleoyl-phosphatidyl-ethanolamine (DOPE) were obtained from Avanti Polar Lipids (Alabaster, Alabama, USA). Eudragit® E-100 was purchased in Evonik (Darmstadt, Germany). Ampicillin (Fersinsa Gb) was supplied by Tecnoquímicas S.A. (Cali, Colombia) and Gentamicin solution (GENFAR®, Cali, Colombia) was purchased from a local pharmacy. The datasets used and materials using during this study are available from the corresponding author on reasonable request.
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7

Synthesis of Multifunctional Magnetic Nanoparticles

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All the reagents were of analytical grade and were used without any further purification. Iron(III) acetylacetonate (Fe(acac)3, ≥97.0%), octadecylamine (ODA, >90.0%), and N,N-Dimethyl formamide (DMF, >99.5%) were obtained from Fluka, (Bucharest, Romania); cobalt(II) acetylacetonate (Co(acac)2, ≥99.9%), chloroform (CHCl3, ≥99%), N-hydroxysuccinimide (NHS, ≥98.0%), poly(ethyleneimine) solution (PEI, ~25 kDa), diethylenetriaminepentaacetic acid (DTPA, ≥98.0%), and triethylamine (Et3N, ≥99.5%) were supplied by Aldrich, (Taufkirchen, Germany); ninhydrin was purchased from Merck, (Darmstadt, Germany); 1-(3-Dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride, (EDC, >98.0%) was purchased from TCI, (Tokyo, Japan); copper(II) nitrate (Cu(NO)2, ≥99.9%) was obtained from Sinopharm Chemical Reagent Co., Ltd., (Shanghai, China); methanol (CH3OH, ≥99.9%) was supplied by Alfa Aesar, (Black freer, MA, USA); and ethanol (C2H5OH) was purchased from Bruggemann GmbH, (Heilbronn, Germany).
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8

Hyaluronic Acid-Chitosan Hydrogel Synthesis

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High molecular weight hyaluronic acid (1600 kDa) was purchased from Sigma Aldrich, Germany; high (175 kDa) and low (35 kDa) molecular weight grades of chitosan, abbreviated as HMW-CTS and LMW-CTS were acquired from Bioprogress, Voronezh, Russian Federation. The following reagents were purchased from Merck, Germany, Darmstadt: succinic anhydride, sodium periodate, lactic acid, ethylene glycol, acetic acid, ninhydrin.
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9

Reagents for Dye Synthesis Protocols

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Reagents for dye synthesis were purchased from Alfa Aesar Co., Ward Hill, MA, USA (ninhydrin, 1,2-diaminobenzene) and Merck, Rahway, NJ, USA (ethyl bromoacetate, 2-indolinone, isatin, 1-methylisatin, 2-aminopyridine, 2-aminobenzaldehyde). Solvents used either for synthesis or spectroscopic measurements, i.e., acetic acid, isopropanol, ethanol, methanol, ethyl acetate, 1-methyl-2-pyrrolidinone (MP), chloroform, deuterated chloroform (CDCl3) and dimethyl sulfoxide (DMSO-d6) were provided by Merck. Monomer, trimethylolpropane triacrylate (TMPTA), commercial photoinitiator, camphorquinone (CQ) and electron donors: (phenylthio)acetic acid (PhTAA), phenylacetic acid (PhAA), 2-phenylpropionic acid (PhPA), N,N-dimethylaniline (DMA), 3-(phenylthio)acrylic acid (PhTACA) and hydrogen donor 2-mercaptobenzoxazole (MBX) were obtained from Sigma-Aldrich Co., St. Louis, MO, USA while N-phenyliminodiacetic acid (PhIAA) was from Lancaster, Kenilworth, NJ, USA. Thin layer chromatography plates (DC-Plastikfolien Silica gel 60 F254, 0.2 mm) from Merck Co. Rahway, NJ, USA.
The structures of the co-initiators used are shown in Figure 12. They are divided into two groups, i.e., electron donors and hydrogen atom donors.
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10

Functionalization of Silica-based Surfaces

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Ammonium hydroxide solution (28–30%), (3-aminopropyl)-triethoxysilane (APTES, 99%), trimethylchlorosilane (TMCS, ≥ 98%), ethanol (99.8%), hydrochloric acid (HCl, 37%), methanol (MeOH, ≥ 99.8%), ninhydrin (≥ 99%) and tetramethyl orthosilicate (TMOS, ≥ 98%) were obtained from Merck KGaA (Darmstadt, Germany). Carbon dioxide (technical grade) was purchased from Westfalen AG (Münster, Germany). Ibuprofen was kindly gifted from Euro OTC Pharma GmbH (Bönen, Germany).
Unless otherwise specified, ultrapure water was used.
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