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7 protocols using anti actin hrp antibody

1

Western Blot Analysis of EMT Markers

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Cell extracts were obtained by lysis with RIPA buffer (0.5% sodium deoxycholate, 50 mM Tris-HCl; pH 8, 150 mM NaCl, 1% NP40, 0.1% SDS) supplemented with a protease inhibitor cocktail (Roche). Equal amounts of protein (10–50 μg/lane) were loaded into SDS-PAGE gels. After transfer onto nitrocellulose membrane, blots were incubated overnight at 4 °C with the following antibodies: anti-OPN antibody (ab8448 Abcam, Cambridge, UK), anti-β-catenin antibody (1/1000, Santa Cruz Biotechnology, Inc., Dallas, TX, USA), anti-SNAI2 (Novus Biologicals, Englewood, CO, USA) anti-actin-HRP antibody (1/2000, Santa Cruz Biotechnology, Inc., Dallas, TX, USA), and anti-CDH1 antibody (1/1000, Santa Cruz, Inc., Dallas, TX, USA), followed by incubation with a horseradish peroxidase-conjugated secondary antibody (goat anti-rabbit or anti-mouse at 1/2000 dilution, Cell Signaling, Danvers, MA, USA). Results were revealed with a chemiluminescence ECL detection system (Bio-Rad, Hercules, CA, USA) and visualized on Chemidoc systems (Bio-Rad, Hercules, CA, USA). Protein expression was quantified by densitometric analysis of the immunoblots using Image Lab software v.5.2.1 developed by Bio-Rad, Hercules, CA, USA.
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2

Immunoblot Analysis of BIM and HOXD10

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Cells treated with various drug combinations were washed with cold PBS and lysed in RIPA buffer containing 1mg ml−1 DNAse (Roche Life Science, Indianapolis, IN) and supplemented with protease inhibitor cocktail (Roche Life Science, Indianapolis, IN). Cell lysates, stored frozen at −80 °C were resolved on 4–20% SDS-PAGE gels and transferred onto a nitrocellulose membrane. The membranes were first stained with anti-BIM (Cell Signaling Technology, Danvers, MA), and anti-HOXD10 (Santa Cruz Biotechnology, Dallas, TX) antibody cocktail followed by peroxidase conjugated-anti-rabbit antibody. ECL (Roche Life Science, Indianapolis, IN) was used to develop blots. Signal intensity was recorded on an IVIS Spectrum imaging station (Perkin Elmer, Hopkinton, MA). After documenting signal, the blot was subjected to a second round of immunostaining using an anti-actin-HRP antibody (Santa Cruz Biotechnology, Dallas, TX).
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3

Immunoblotting Protocol for Protein Detection

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Immunoblotting was performed as described previously (16 (link),18 (link)). Briefly, cells were lysed in RIPA buffer (50 mM Tris-HCl, 150 mM NaCl, 5 mM EDTA, 1% Nonidet P-40, 0.5% sodium deoxycholate, 0.1% SDS, 10 mM NaF, 10 mM Na2HPO4, pH 7.4) plus protease inhibitor cocktail for 20 min and cleared for insoluble debris by centrifugation at 15,000 × g for 15 minutes at 4°C. Protein concentrations were standardized using DC Protein Assay (Bio-Rad, Hercules, CA) and an aliquot of the lysate was denatured in 2X SDS-sample buffer and boiled for 5 minutes. Equivalent concentrations of lysates were resolved by SDS–PAGE, followed by transfer to PVDF membranes, and immunoblotted with the appropriate antibody. Blots were visualized with HRP-conjugated secondary antibody followed by ECL. Blots were stripped by incubation in glycine IgG stripping buffer for 30–45 minutes with agitation (25 mM Glycine, 1% SDS, 50°C, pH 2.0) for re-probing. Polyclonal anti-COX-2 antibody (160126) was purchased from Cayman Chemical (Ann Arbor, MI), rabbit anti-FFA4 antibody was purchased from Novus Biologicals (Littleton, CO), rabbit anti-phosphoThr202/Tyr204-p44/p42 MAPK (ERK1/2) and p44/42 MAPK (ERK1/2) antibodies were purchased from Cell Signaling Technologies (Beverly, MA), and anti-actin-HRP antibody was purchased from Santa Cruz Biotechnology (Santa Cruz, CA).
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4

Western Blot Analysis of Cellular Proteins

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Total cellular protein was extracted as described previously (Engel et al., 2017 (link)). Then, 30–50 µg of protein was mixed with an equal amount of 2× Laemmli buffer (200 mM Tris–HCl, pH 6.8, 4% sodium dodecyl sulfate (SDS), 20% glycerol, and 200 mM DTT), denatured at 95°C for 5 min, separated by SDS gel electrophoresis (30 mA per gel, 1.5 h), and transferred onto a nitrocellulose membrane (GE Healthcare, 0.45-µm pore size) using 450 mA for 1.5 h. The membranes were blocked with 5% non-fat dry milk in TBST buffer (150 mM NaCl, 20 mM Tris, 0.1% Tween 20, pH 7.6) for 1 h at room temperature (RT), incubated with the respective primary antibodies (anti-phospho-p53 (Ser15), anti-p53, anti-PUMA, and anti-p21 (all 1:1000, Cell Signaling Technology)) at 4°C overnight, and then incubated with HRP-coupled secondary antibodies (1:5000, Cell Signaling Technology) or IRDye800-coupled anti-rabbit and anti-mouse antibodies (1:10000, LI-COR Biosciences) in 5% milk/TBST for 1 h at RT. Anti-actin-HRP antibody (1:5000, Santa Cruz) or mouse/rabbit anti-β-actin (1:10000, LI-COR Biosciences) was used to detect actin as a loading control. Protein bands were detected by chemiluminescence of the ECL Western Blotting Substrate (Thermo Scientific) or by near-infrared fluorescence with the Odyssey Fc (LI-COR Biosciences).
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5

Detecting Drosophila 20S Proteasome Subunit

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Protein samples were run on a 4-15% gradient SDS-PAGE gel (no. 4568084, Bio-Rad) and transferred to a PVDF membrane (no. 1620177XTU, Bio-Rad). Mouse monoclonal antibody specific for detection of the α subunit of the 20S core of D. melanogaster origin (1:100 dilution, no. sc-65755, Santa Cruz Biotechnology). The goat polyclonal anti-Actin-HRP antibody, conjugated to horseradish peroxidase (1:1000 dilution, no. sc-1616, Santa Cruz Biotechnology) was used for protein loading control.
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6

Immunoblot Analysis of Signaling Proteins

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Cells treated with various drug combinations were washed with cold PBS and lysed in RIPA buffer containing 1 mg/mL DNAse (Roche Life Science) and supplemented with protease inhibitor cocktail (Roche Life Science). Cell lysates stored frozen at −80°C, were resolved on 4%–20% SDS-PAGE gels and transferred onto a nitrocellulose membrane. The membranes were first stained with anti-BIM (Cell Signaling Technology), anti-HOXD10 (Santa Cruz Biotechnology) or anti-PTEN (Santa Cruz Biotechnology) antibody followed by peroxidase-conjugated anti-rabbit antibody. DAB substrate (Roche Life Science) was used to develop blots. After documenting signal, the blot was subjected to a second round of immunostaining using an anti-actin HRP antibody (Santa Cruz Biotechnology).
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7

Protein Expression Analysis in Cell Media

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Samples for western blot were prepared, runned and immunostained as described in [14] . Antibodies directed against STAT3, P-STAT3, AKT, P-AKT, ERK, P-ERK and Vinculin were purchased from Cell Signaling Technology (Danvers, MA), were as the anti-actin-HRP antibody was obtained from Santa Cruz Biotechnology (Heidelberg, Germany). Leptin, adiponectin, IL6, MCP1 concentrations in the conditioned media were determined by using multi-analyte cartridge ELISA™ immunoassay according to the manufacturer's instructions (Bio-Techne, San Jose, CA, USA).
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