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Mouse monoclonal anti v5 antibody

Manufactured by Thermo Fisher Scientific
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The Mouse monoclonal anti-V5 antibody is a laboratory reagent used to detect and quantify the presence of the V5 epitope tag in protein samples. It is a mouse-derived monoclonal antibody that specifically recognizes the V5 tag, which is commonly used to facilitate the detection and purification of recombinant proteins.

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44 protocols using mouse monoclonal anti v5 antibody

1

Immunofluorescence Analysis of V5-tagged Proteins

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Approximately 50,000 HeLa cells were seeded in Nunc™ Lab-Tek™ II Chamber Slide™ System Thermo Scientific™ and transfected 24 hours later with 1 µg of plasmid DNA according to the Fugene® protocol. Two days after transfection, coverslip grown transfected HeLa cells were washed three times with PBS and fixed with 4% PFA for 15 min. Cells were then washed five times and permeabilized with a 50% methanol/acetone mix for 10 min. After five PBS washings, permeabilized cells were incubated for 1 hour at room temperature, first with 1% bovine serum albumin (BSA) PBS 1/200 mouse monoclonal anti-V5 antibody (Invitrogen) and then with 1% BSA PBS 1/750 anti mouse Alexa Fluor 488 conjugated antibody. After several PBS washings, coverslips were mounted with Mounting medium for immunofluorescence (Interchim). Imaging was performed using a Leica SP5 confocal microscope. Colocalization analyses were performed with Huygens Essential for Mac version 4.3.1p3 (Scientific Volume Imaging B.V.). Images were first deconvoluted then analyzed using the Costes method.
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2

Affinity Purification of BK Channel Complexes

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HEK-293 cells expressing the BKαγ1WT or BKαγ1F273S channel complexes were preincubated with 2 μM mallotoxin in PBS buffer (pH 7.4) for 5 minutes. The channel complexes were then solubilized from cell membranes with 1% dodecyl maltoside (DDM) in Tris-buffered saline (TBS) buffer (50 mM Tris, 150 mM NaCl, pH 7.6) supplemented with 2 μM mallotoxin. After centrifugation at 17,000 g for 10 minutes, the solubilized channel complexes in the supernatant were incubated for 2 hours with mouse monoclonal anti-BKα antibody (University of California–Davis/NIH Neuromab facility) that was covalently crosslinked to protein-A/G agarose beads (Thermo Fisher Scientific). The captured protein complexes were washed three times with TBS buffer supplemented with 1% DDM and 2 μM mallotoxin, eluted with SDS-PAGE sample buffer, and then loaded directly to 12% SDS-PAGE gel to be separated by electrophoresis. Resolved proteins were transferred to PVDF membranes (Thermo Fisher Scientific) and probed by a mouse monoclonal anti-V5 antibody (1:10000, Invitrogen) for V5-tagged γ subunits and a mouse monoclonal anti-BKα antibody (1:1000, University of California–Davis) for BKα. The intensities of the protein bands were analyzed with ImageJ software (US National Institutes of Health).
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3

Plasmid Constructs for PERK and CHOP

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Expression plasmids for human PERK and its DN mutant K621M were obtained from Ronald Wek [48 (link)]. Reporter plasmid pCHOP-Luc, in which luciferase expression is driven by human CHOP promoter (-644 to +91), was provided by Nai Sum Wong [23 (link)]. Reporter plasmids pGRP78-Luc and pGRP94-Luc were gifts from Kazutoshi Mori [40 (link),58 (link)]. The Grp78 and Grp94 promoters are derived from -304 to +34 of human Grp78 gene and -363 to +34 of human Grp94 gene, respectively. Both promoters harbor multiple copies of ER stress response element [58 (link)]. pUPRE-Luc reporter plasmid has been described elsewhere [41 (link),42 (link)].
Mouse monoclonal anti-V5 antibody was purchased from Invitrogen. Mouse anti-FLAG antibody (clone M2) was from Sigma-Aldrich.
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4

V5-tagged Protein Immunoprecipitation

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HEK293 cells were collected 28 h post-transfection and lysed with buffer (25 mM Tris-HCl [pH 7.4], 150 mM NaCl, 1 mM EDTA, 1% Triton X-100, 5% glycerol, protease inhibitors cocktail Complete (Roche)). Lysates were centrifuged for 25 min at 4°C and 13,400 g, and the supernatants were used for IP. Supernatants were incubated with 2 μg mouse monoclonal anti-V5 antibody (Invitrogen, catalog #R960–25) for 1 h at 4°C with gentle agitation. The protein-antibody complexes were incubated with ethanolamine-blocked protein G sepharose beads (GE Healthcare) overnight at 4°C with gentle agitation. After IP the beads were washed three times with ice cold PBS and the precipitated immune complexes were analyzed by mass spectrometry.
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5

Investigating Protein Interactions and Expression

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Immunoprecipitation, immunoblot, and immunofluorescence analyses of protein interactions and expression were performed similarly to analyses we reported39 (link). Rabbit polyclonal anti-FLAG antibody (Cat# F7425 from Sigma-Aldrich) and mouse anti-V5 (clone V5-10) agarose affinity gel (Cat# A7345 from Millipore) were used in immunoprecipitation. FLAG- or V5-peptide was used to elute the antibody-trapped proteins from the beads. Mouse monoclonal anti-FLAG M2 antibody (Cat# F3165 from Sigma-Aldrich) at 1:1000 dilution and mouse monoclonal anti-V5 antibody (Cat# R96125 from Invitrogen) at 1:10,000 dilution were used for immunoblotting. Rabbit monoclonal anti-LSM12 antibody (Cat# EPR12282 from Abcam) at a dilution factor of 1:1000 and 1:100 was used for immunoblotting and immunofluorescence, respectively.
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6

Antibody Characterization and Validation

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The following antibodies were used: mouse monoclonal anti-β-actin (cat. no. A1978, 1:10,000; Sigma-Aldrich), rabbit polyclonal anti-FLAG (cat. no. 2368, 1:1000; Cell Signaling), mouse monoclonal anti-PARP-1 (sc8007, 1:1000; Santa Cruz), rabbit polyclonal anti-calnexin (sc11397, 1:1000; Santa Cruz), mouse monoclonal anti-V5 antibody (R960-25, 1:4000; Invitrogen), rat monoclonal anti-HA antibody (12158167001, 1:4000; Roche), rabbit polyclonal anti-HA antibody (71-5500, 1:1000 Invitrogen), goat polyclonal anti-calnexin (sc-6465, 1:200; Santa Cruz), sheep anti-TGN46 (AHP500, 1:200 AbD Serotec) and mouse monoclonal anti-GM130 antibody (610823, 1:200; BD Biosciences). Goat anti-mouse (cat. no. 31430, 1:5,000) and goat anti-rabbit IgG conjugated to horseradish peroxidase (31460, 1:5,000) were from Thermo Fischer Scientific. The following secondary antibodies were used for indirect immuno-fluorescence: FITC-conjugated donkey anti-sheep/goat (STAR88F, 1:200; AbD Serotec), Cy3-conjugated donkey anti-mouse IgG (715-165-150, 1:200; Jackson ImmunoResearch), Cy5-conjugated donkey anti-rabbit IgG (711-175-152, 1:200; Jackson ImmunoResearch), Cy2-conjugated donkey anti-mouse IgG (715-225-150, 1:200; Jackson ImmunoResearch), Cy5-conjugated donkey anti-goat IgG (705-175-147, 1:200; Jackson ImmunoResearch), Cy3-conjugated donkey anti-rabbit IgG (711-165-152, 1:200; Jackson ImmunoResearch).
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7

Immunofluorescence Imaging of Protein Interactions

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Hela cells were grown on glass cover-slips and transiently transfected with FLAG-NPMRAR and V5/His-TRADD. Cells were fixed with 2% para-formaldehyde in PBS for 15 min at room temperature, permeabilized with 0.1% Triton X-100 in PBS for 15 min, and non-specific binding sites were blocked with PBS containing 2% BSA for 45 min. After blocking, cells were incubated with a 1:200 dilution of mouse monoclonal anti-V5 antibody (Invitrogen) and/or a 1:500 dilution of rabbit polyclonal anti-FLAG antibody (Sigma). After washing with PBS containing 0.5% BSA, cells were incubated for 1 h with a 1:1000 dilution of Alexa 488-conjugated anti-rabbit antibody and 1:500 dilution of Alexa-546-conjugated anti-mouse antibody (Invitrogen). Nuclei were stained with 1:5000 dilution of DRAQ5 (Cell Signaling Technologies, Danvers, MA). Confocal images were captured using a Leica TCS SL microscope (Leica, Heidelberg, Germany).
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8

Meiotic Protein Extraction and Analysis

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For protein extraction, ∼5 OD of meiotic culture was spun down and pellets were frozen at −80°C. Protein extraction from meiotic cultures was performed using NaOH/TCA extraction method as described in (84 (link)). Lysate was run on 12% SDS PAGE gels and proteins were transferred to nitrocellulose membrane by cold wet tank transfer. Hop2, Sae3 and Rec8 were tagged with 3xV5 epitope and were detected using mouse monoclonal anti-V5 antibody (Invitrogen) at a dilution of 1:2500. For detection of Dmc1, an endogenous goat anti-Dmc1 antibody was used (generous gift from Dr Neil Hunter) at a dilution of 1:2000. For detection of Tdh1/2, endogenous mouse anti-GAPDH antibody (Thermo Fisher, GA1R) was used at 1:10 000 dilution. Secondary antibodies were HRP labeled goat anti mouse (Invitrogen, G21040) or donkey anti goat (Life technologies, A16005) and were used at 1:10 000 dilution.
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9

Immunoblotting Analysis of C. burnetii Proteins

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C. burnetii production of IcmD, IcmK, dCas9‐3x‐cMyc, GST‐AntitoxP, ToxP‐V5‐6xHis, and XpressT‐6xHis‐CBU0665 was examined by sodium dodecyl sulphate‐polyacrylamide gel electrophoresis (SDS‐PAGE) and immunoblotting. PVDF membrane was incubated with the following antibodies: polyclonal rabbit anti‐IcmD antibody (1:5000), polyclonal rabbit anti‐IcmK antibody (1:2500; generously provided by Edward Shaw, PCOM South Georgia), mouse monoclonal anti‐c‐myc antibody (1:5000; clone 9E10 BD Biosciences), goat polyclonal anti‐GST antibody (1:5000, Sigma‐Aldrich), mouse monoclonal anti‐V5 antibody (1:5000; Invitrogen), and mouse monoclonal anti‐XpressT antibody (1:5000; Invitrogen). Following incubation of membranes with primary antibody, reacting proteins were detected using anti‐rabbit (IcmD and IcmK), antigoat (GST‐AntitoxP), or antimouse (dCas9‐3x‐c‐myc, ToxP‐V5‐6xHis, and XpressT‐6xHis‐CBU0665) IgG secondary antibodies conjugated to horseradish peroxidase (Pierce, Rockford, IL) and chemiluminescence using ECL Pico or Femto reagent (Pierce). Chemiluminescence was detected using the UVP ChemStudio plus imager (Analytik Jena), and images were processed using the VisionWorks software (Version 9.1.21054.7804).
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10

V5, Myc, and FLAG Immunoprecipitation Protocol

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The immunoprecipitation method was performed as previously reported68 (link). Anti-V5 antibody (Invitrogen) and NP-40 lysis buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, and 1% NP-40) supplemented with 20 mM N-ethylmaleimide (freshly dissolved) and complete protease inhibitor (Roche) were used for the immunoprecipitation. The immunoprecipitated proteins were separated by SDS-PAGE and transferred to a nitrocellulose membrane (AmershamTM HybondTM-ECL, GE Healthcare). The membranes were blocked with 1% skim milk (BD) in TBS-T buffer (50 mM Tris-HCl, pH 8, 150 mM NaCl, and 0.05% Tween-20). The primary antibodies that were used were mouse monoclonal Anti-V5 antibody (Invitrogen), diluted 1:5000 to 1:10000; rabbit polyclonal anti-Myc antibody (MBL), diluted 1:1000; and mouse monoclonal anti-FLAG antibody (Sigma), diluted 1:1000. The primary antibodies were visualized using the appropriate secondary antibodies, anti-mouse IgG or anti-rabbit IgG, labeled with horseradish peroxidase (Invitrogen). The immunoblot bands were detected using SuperSignal West Femto Maximum Sensitivity Substrate (Thermo Scientific), with LAS-1000 Plus image analyzers (Fuji Photo Film Co. Ltd.) or LAS 4000 mini (GE Healthcare).
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