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8 protocols using cd3 percp clone sk7

1

Comprehensive Immunophenotyping of Peripheral Blood

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PB samples were collected through venipuncture in 2 mL BD Vacutainer® spray-coated K2EDTA blood collection tubes (BD Biosciences, San Jose, CA, USA; #367841). One hundred μL of whole blood was transported into 5 mL Corning™ Falcon™ Round-Bottom Polystyrene Tubes (#352054) and stained with 12 monoclonal antibodies against the surface markers: CD45-APC-H7 (clone 2D1, #560178); CD3-PerCP (clone SK7, #340663); CD4-BV510 (clone SK3; #562970); CD8-PE (clone HIT8a, #555635); CD14-BV605 (clone M5E2, #564054); CD16-APC (clone B73.1, #561304); CD56-APC-R700 (clone NCAM16.2, #565139); CD25-PE-CF594 (clone M-A25, #562403); CD11b-BV786 (clone D12, #742642); CD183 (CXCR3)-BV421 (clone 1C6/CXCR3, #562558); CD194 (CCR4)-BV650 (clone 1G1, #744140); and CD196 (CCR6)-BB515 (clone 11A9, #564479) (all from BD Biosciences). The staining procedure was performed in BD Horizon™ Brilliant Stain Buffer (BD Biosciences, #563794) followed by red blood cells lysis with 1x BD FACS™ lysing solution (BD Biosciences, #349202) as suggested by the manufacturer for the Lyse-no-Wash protocol.
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2

CD3/CD4/CD8 T cell Activation Assay

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Human PBMCs from healthy donors were prepared from 50 ml of fresh blood with Ficoll in Leucosep tubes. The tubes were centrifuged at room temperature (30 min, 800 × g) without brake. Isolated cells were washed and staved overnight. The cells were treated with AX-024 or vehicle and incubated for 1 h at 37 °C followed by further incubation on ice. 10, 25, or 50 μg·ml−1 anti-CD3-biotin (clone OKT3, BioLegend) was added to the cells on ice for 15 min before neutravidin was added at a final concentration of 20 μg·ml−1 for cross-linking. After stimulation for 3 min at 37 °C, cells were fixed (BD Cytofix fixation buffer) and permeabilized (TruePhos buffer, BioLegend). Staining was performed with CD3-PerCP (clone SK7, BD), CD4-BUV395 (clone SK3, BD), CD8-BV605 (clone RPAT8, BioLegend), and Zap70-PE (clone 65E4, CST). Flow cytometry and data analysis were done as described above.
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3

Staurosporine-Induced Apoptosis Assay

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Cells were treated with 1 µM Staurosporine (Sigma S6942) for 6 h at 37 °C. Activated condition cells were then stimulated with human Dynabeads (ThermoFisher) for 3 h at 37 °C. After stimulation, cells were washed and incubated with Annexin V Conjugate, CD3-PerCP (clone SK7), and CD4-BV510 (clone OKT4) both of which were from BD Biosciences (San Jose, CA) all in annexin-binding buffer for 15 min at room temperature. Cells were then washed with annexin-binding buffer. Data were collected using a Cyto-Flex-S cytometer (Beckman).
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4

CD8+ T-cell Degranulation Assay

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To assess CD8+ T-cell degranulation, purified CD8+ T cells were incubated in the presence or absence of P815 target cells at a 1:1 ratio for 30, 60, 90, 120, and 180 min at 37 °C. Cells were then stained using the following fluorescently labeled antibodies: anti-CD107a-PE (clone H4A3), CD56-APC (clone NCAM16.2), CD8-FITC (clone SK1), and CD3-PerCP (clone SK7), all of which were from BD Biosciences (San Jose, CA). Data were collected using a Cyto-Flex-S cytometer (Beckman). CD3+CD8+ cells were gated and assessed for surface expression of CD107a.
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5

PBMC Viability Analysis via Zombie Violet Flow

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On 96-well flat-bottom plates, 2 × 105 of PBMCs were seeded (Greiner Bio-One, Kremsmünster, Austria) and cultured for 24 h at 37 °C in a humidified atmosphere with 5% CO2, in the presence of Se-Le-30 (100 µg/mL) and with an equivalent amount of medium and water for injection as controls. After incubation, cells were harvested, washed in 2 mL of PBS, resuspended in 100 µL of Zombie Violet™ (BioLegend, San Diego, CA, USA) stock solution at a ratio of 1:400, incubated for 20 min at room temperature in the dark, then washed with 2 mL of Stain Buffer and labeled with mouse anti-human CD3 Ab (CD3-PerCP, Clone SK7, BD Biosciences, San Jose, CA, USA) in 100 µL of Stain Buffer for 15 min. Next, cells were washed in 2 mL of Stain Buffer, resuspended in 100 µL of PBS wit 0.01% sodium azide, and acquired with DxFlex flow cytometer. For each variant, the percentage of CD3+ T lymphocytes positive for Zombie Violet dye was recorded and compared to control cultures.
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6

In Vitro Lymphocyte Proliferation Assay

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The thawed PBL, allowed to rest overnight as described above, were used for an in vitro proliferation assay using the fluorescent cell proliferation indicator CytoTell green (AAT Bioquest; LuBioScience), according to the manufactures protocol (20 min incubation at room temperature in 1:600 diluted dye). Cells (150′000 in 270 μl per well) were plated in duplicates in a 96 U-bottom well plate (TTP, Switzerland) either in control medium or in stimulation medium with 2.5 μg/ml pokeweed mitogen or in stimulation medium with 0.1% phytohaemagglutinin (PHA-M, Sigma-Aldrich, Switzerland). The plates were incubated at 37 °C and 5% CO2 in humid atmosphere. Proliferative responses of the stimulated PBL and the controls were measured after 7 days of incubation by flow cytometry using the intracellular dye dilution method and following surface marker antibodies: CD3-PerCP (clone SK7, BD biosciences), CD4-APC (clone RPA-T4, BD bioscience), CD8-PE (clone RPA-T8, BD biosciences). Cells were incubated with 5 μl of antibodies for 15 min at room temperature, washed and resuspended in 200 μl PBS. Cell fluorescence was assessed with FACScalibur flow cytometer and data were analyzed using the proliferation tool of the FlowJo, 9.0 software.
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7

CD57+ Cell Depletion and Flow Analysis

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Depletion of CD57 + cells was performed per manufacturer's protocol using human anti-CD57 MicroBeads (Miltenyi Biotec). The efficacy of the depletion was assessed by flow cytometry using CD3 PerCP (clone SK7; BD Biosciences), CD56 PE-Cy7 (clone NCAM16.2; BD Biosciences) and CD57 FITC (clone TB03; Miltenyi Biotec) antibodies. Cells were acquired on an LSR Fortessa flow cytometer (BD Biosciences) and data were analyzed using FlowJo software (FlowJo LLC).
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8

Immunosuppressive Effect of MSC

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Inactivated and control MSC were plated in round-bottom 96-well plates in MEM-a supplemented with 2 mM Lglutamine, P/S, and 10% heat-inactivated (30 min, 57°C) human serum in various numbers; 20, 10, 5, and 2.5 • 10 3 MSC/well. The next day, 5 • 10 4 carboxyfluorescein succinimidyl ester (CFSE)-labeled healthy donor-derived peripheral blood mononuclear cells (PBMC) and 5 • 10 4 g-irradiated (40 Gy) HLA-mismatched PBMC were added to the MSC. After 7 days, PBMC were harvested and stained for 30 min with CD3-PERCP (clone SK7; BD Biosciences). Cell proliferation was determined by CFSE dilution measured on a FACSCanto II flow cytometer (BD Biosciences).
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