E. coli (JE28) cells
50 were grown in M9 media containing
15N NH
4Cl (1 g/l) and 30 µg/ml kanamycin at 37 °C. At an OD
600nm of around 0.8, the cells were cooled on ice for 15 min and harvested by centrifugation (5000 ×
g, 30 min, 4 °C). Cells were lysed and purified by affinity chromatography as described before
50 . Briefly, the cells were harvested by centrifugation (5000 ×
g, 30 min, 4 °C) and were disrupted using a M-100P microfluidizer (1000 bar, Microfluidics, Westwood, USA) in ribosome buffer (20 mM Tris-HCl pH 7.6, 10 mM MgCl
2, 150 mM KCl, 30 mM NH
4Cl). The lysate was centrifuged twice (38,400 ×
g, 4 °C, 30 min) and further purified using nickel-affinity chromatography (
HisTrap HP, Ni-NTA) (GE Healthcare, Chicago, USA) equilibrated with ribosome buffer. The ribosomes were eluted in a linear gradient to 150 mM imidazole. Ribosome-containg fractions were pooled and loaded on a 10–40% (w/v) sucrose gradient. The buffer was exchanged to JE28 buffer (20 mM Tris-HCl, 10 mM MgCl
2, 150 mM KCl, 30 mM NH
4Cl, pH 7.6). The final sample was concentrated to 11 µM for the DNP-enhanced solid-state NMR experiments.
15N-labeled ribosomes were used to optimize the glycerol cushions required for the solid-state NMR experiments.
Schulte L., Mao J., Reitz J., Sreeramulu S., Kudlinzki D., Hodirnau V.V., Meier-Credo J., Saxena K., Buhr F., Langer J.D., Blackledge M., Frangakis A.S., Glaubitz C, & Schwalbe H. (2020). Cysteine oxidation and disulfide formation in the ribosomal exit tunnel. Nature Communications, 11, 5569.