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Alexa 633 anti rabbit

Manufactured by Thermo Fisher Scientific

Alexa Fluor 633 anti-rabbit is a fluorescent secondary antibody used in immunoassays and cell biology applications. It is designed to bind to rabbit primary antibodies, enabling detection and visualization.

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3 protocols using alexa 633 anti rabbit

1

Immunostaining of Drosophila Brains

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3–7 day old female brains were dissected in ice cold PBS before fixation in 4% paraformaldehyde. Brains were blocked in PBST (PBS, 0.3% Triton X-100) containing 5% normal donkey serum (Jackson Laboratory) and 5% normal goat serum (Life Technologies). Brains were incubated with 1:200 rat anti-Sh [40 (link)] pre-cleared with ShDf lysate followed sequentially by incubation with 1:250 rabbit anti-Dα3 bleed 88 [26 (link)]. Brains were washed with PBST and stained with 1:1000 Alexa 633 anti-rabbit (Life Technologies) and 1:1000 anti-rat Alexa 488 (Jackson ImmunoResearch). After additional washes, brains were equilibrated and mounted in Vectashield (Vector Labs). Images were taken at 40× magnification on a Leica SP5 confocal microscope using 0.5μm stack intervals. 5μm Z-projection images were generated, rotated and brightness/contrast adjustments were made across the entirety of the images using Fiji [41 ].
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2

Visualization of M1-linked Ubiquitin Chains

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293 cells were transiently transfected with the indicated plasmids (pSG5 LMP1, pSG5 FLAG-TRAF1, and/or the UBAN-GFP sensor [71 (link),72 (link)]). UBAN-GFP is a fusion between the conserved linear Ubiquitin Binding domain of ABIN1 and NEMO/IKK-gamma and GFP. The UBAN-GFP biosensor has been validated to be highly specific for M1-pUb chains in vitro and in vivo [71 (link),72 (link)]. 20 hours after transfection, cells were fixed, permeabilized, and stained where indicated with antibodies against LMP1 or TRAF1 (Santa Cruz, rabbit polyclonal). Secondary antibodies used were Alexa-561-conjugated anti-mouse and Alexa-633-anti-rabbit (both from Life Technologies). Cells were analyzed by confocal microscopy, and images were processed with Fiji (http://wiki.imagej.net/Fiji).
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3

Immunofluorescent Labeling of Brain Tissue

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All animals were deeply anesthetized with ketamine-xylazine and transcardially perfused first with cold PBS (20mL) followed by 30–40 mL of cold 4% PFA (paraformaldehyde, diluted in PBS), and brains were post-fixed in 4% PFA overnight at 4°C. For cryoprotection they were next put in 30% sucrose (diluted in PBS) overnight and frozen at - 45°C in isopentane. The brains were cut with a freezing microtome (Thermo Fisher), with nominal section thickness set to 20 μm. After rinsing with PBS, slices where incubated 2h at room temperature in 0.3% PBT (0.3% Triton X- in PBS) and 10% BSA blocking solution. Primary antibodies diluted in 0.3% PBT and 0.1% NGS (normal goat serum) were incubated overnight at 4°C. The following antibodies were used: anti-CB1 (Frontiers institute, goat 1:400), anti-GFP (Millipore, MAB 3580 mouse 1:500), anti-DsRed (Clontech, rabbit 1:500), anti-PV (Sigma PARV-19, mouse 1:1000) and anti-SST (Santa Cruz G10 sc-55565, mouse 1:250). Slices were then rinsed with PBS and incubated for 2h at room temperature with the secondary antibodies Alexa 488 anti-goat, Alexa 488 anti-mouse and Alexa 633 anti-rabbit, all obtained from Life Technologies and diluted 1:500 in PBT 0.3%. Slices were mounted with DAPI Fluoromount (Sigma) and stocked at 4°C. Whole brain slices were imaged using an epifluorescence slice scanner (Axio scan Z1 Zeiss, magnification 20×).
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