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2 protocols using sialyltransferase inhibitor 3 fax peracetyl neu5ac

1

Sialidase Regulation of Lysosomal Function

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All chemicals were purchased from Sigma Aldrich and cell culture reagents were from Thermo Fischer, unless indicated otherwise. Lipopolysaccharide (E. coli O111:B4), sialidase from V. cholerea, sialyltransferase inhibitor 3-Fax-peracetyl Neu5Ac, vacuolin-1, GW4869, FITC-labeled peanut agglutinin were from Sigma. Anti-Neu1 antibody (clone F8) was from Santa Cruz, anti-PPCA antibody was from Proteintech, anti-Lamp1 antibody (clone 1D4B) was from Biolegend, anti-MAP2 antibody (PA5-17646) was from Thermo Fischer, anti-FLAG (M2) was from Sigma. Protein G agarose, protein A/G magnetic beads, siRNAs and LysoTracker Green DND-26 dye were from Thermo Fischer. Gal-3 was a kind gift from Tomas Deierborg.
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2

Glycan Modulation and Analysis

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UGCG inhibitors MZ31 (used concentration: 2μM), MZ21 (2μM), miglustat (100μM) were produced as previously described (Ghisaidoobe et al., 2014 (link)) and eliglustat (200nM) was obtained from Bio-Connect. Swainsonine (20μg/mL) and kifunensine (20μM) were obtained from Sigma. N-glycosylation inhibitor activity was confirmed by incubating W6/32 immunoprecipitated HLA-I molecules with Endoglycosidase H (Sigma) in a 20μl reaction mixture (50μM Sodiumcitrate (pH5.5), 0.2% SDS, 2μl Endoglycosidase H and protease inhibitors) for 18h at 37°C followed by HLA-I detection on immunoblot. Sialyltransferase inhibitor (3Fax-peracetyl Neu5Ac, 100μM) was obtained from Sigma and fucosyltransferase inhibitor (2-Deoxy-2-fluoro-L-fucose, 100μM) was obtained from Carbosynth. Cells were cultured for 2 or 3 days at 37°C with inhibitors and analyzed by flow cytometry. Cells were incubated with neuraminidase (N2876, Sigma, 225mU/mL) for 1h at 37°C.
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