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5 protocols using cf633 phalloidin

1

Effect of E7 Peptide on Periodontal Cell Morphology

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To investigate the effect of the E7 peptide on
the morphology of
the periodontal cells, the GECs, GFs, PDLSCs, and BMSCs were seeded
onto the NFG-MS or E7-NFG-MS in Costar Flat Bottom Ultra-Low Attachment
96-well plates at a density of 1 × 104 cells/well,
separately. The microspheres were transferred to a new well in a 24-well
plate after cultivation for 1 h to avoid cell aggregation. After cultivation
for 3, 6, and 12 h, immunofluorescent staining of the actin cytoskeleton
was performed to observe the stretch and morphology of cells on the
microspheres. The cell-microsphere constructs were fixed with 4% paraformaldehyde
(PFA) at 4 °C for 30 min and permeabilized in 0.3% Triton X-100
for 15 min. After blocking with 20% goat serum and 3% BSA for 1 h,
the samples were stained with CF633 Phalloidin (Biotium, USA) at room
temperature for 2 h and counterstained with Hoechst (Invitrogen).
A confocal laser scan microscope (TCS SP5, Leica, USA) was used to
acquire images of the single cell on a microsphere. The cell spreading
area was calculated by using Imaris 9.0 and Image-Pro plus 6.0 software.
Three samples were collected at each time point, and the experiment
was repeated three times.
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2

Osteoclasts Degrade Gelatin under Hyperglycemia

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To explore whether osteoclasts degrade gelatin and the influence of high glucose on gelatin degradation, osteoclast precursors were seeded on NFG-MS or electrospinning nanofibrous gelatin membrane in 96-well culture plates at a density of 2×104 for 7 days. Immunofluorescent staining of actin was performed to visualize osteoclastogenesis on the surface of nanofibrous gelatin membrane. The cell-membrane constructs were fixed in 4% paraformaldehyde at 4°C for 30 min and permeabilized in 0.3% Triton X-100 for 15min. Following blocking with 20% goat serum and 3% BSA for 1 h, the samples were stained with CF®633 Phalloidin (Biotium, USA) at room temperature for 2 h and counter-stained with Hoechst (Invitrogen). Images were acquired using a confocal laser scan microscope (TCS SP5, Leica, USA). Attached cells on the NFG-MS were removed through an ultrasonic processor in cold PBS for SEM observation of gelatin degradation.
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3

Comprehensive Cellular Visualization Protocol

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For actin staining, the NF-MT samples were permeated with 0.3% Triton X-100 for 10 min, blocked with 5% goat serum for 30 min at room temperature, and incubated with 10 U/mL CF633 phalloidin (Biotium, 00046) for 60 min at 37 °C. For nuclear staining, the samples were immersed into 1 μg/mL Hoechst 33342 (Thermo Scientific, 62249) for 10 min at room temperature. For immunofluorescence staining, the NF-MT samples were permeated with Triton X-100 for 10 min and blocked with 5% goat serum to prevent nonspecific staining for 4 h at room temperature. Afterward, the samples were incubated with primary antibodies that included an anti-integrin beta-1 antibody (1:1000, Abcam 179471), anti-vinculin antibody (1:150, Abcam 129002), anti-β tubulin antibody (1:400, Abcam 52901), anti-vimentin antibody (1: 500, Abcam 92547), anti-collagen I antibody (1:200, Abcam 6308), and anti-Golgi antibody (1:200, Invitrogen PA3–910). The samples were then washed with PBS and incubated with an Alexa Fluor Plus 555 secondary antibody (1:200, Invitrogen, A32732) with 1% goat serum (1:200, Invitrogen, A32732) for 2 h at room temperature.
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4

Immunocytochemistry of Mlph Mutants

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To investigate localization of Mlph mutants, immunocytochemistry was performed in a quail myoblast cell line (QM7). Vectors containing each of the Mlph mutants were co-transfected with CD9 or FYVE vectors. After 48 h of the incubation, cells were washed, and subsequently permeabilized after fixation with 10% neutral buffered formalin for 1 h. Anti-Flag antibodies were used for detecting Mlph mutants, and Alexa fluor 488 conjugated anti-mouse IgG (#A11011, Invitrogen, Waltham, MA, USA) was used as a secondary antibody. In addition, Phalloidin-CF633 (#00046, Biotium, Hayward, CA, USA) and Lysoview (#70058, Biotium) were used for staining F-actin and lysosome, respectively. There was use of DAPI for nuclei counterstaining.
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5

Actin Polymerization and Depolymerization Assay

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Actin (12.5 µM) in G-buffer was mixed with 2 mM MgCl2, 5 mM EGTA and 100 mM KCl for 1 h at 24°C. To make a 0.5 mM Latrunculin A (LatA) solution, 10 mM LatA in DMSO was first diluted to 2 mM with G-buffer, then further diluted to 0.5 mM in the reaction mixture (the final concentration of DMSO was 4%). The reaction mixture was ultracentrifuged in an Airfuge (Beckman Coulter) at 25 psi, room temperature for 30 min. Pellet and supernatant fractions were analysed on Coomassie-stained gels. For imaging actin filaments, actin (8.33 µM) in G-buffer was polymerized by addition of 2 mM MgCl2, 5 mM EGTA, 100 mM KCl and 2% polyethylene glycol 20,000 (#8.17018.1000, Merck Millipore) followed by incubation at 24°C for 1 h. 5% (v/v) Rhodamine–phalloidin (#R415, Thermo Fisher Scientific) or phalloidin–CF633 (#00046, Biotium) was added, and F-actin was imaged using an Andor Revolution XD spinning-disc confocal system on a Nikon Eclipse Ti inverted microscope, with a Nikon Plan Apo Lambda 100×1.45 NA oil immersion objective lens, a spinning-disc system (CSU-X1; Yokogawa) and an Andor iXon Ultra EMCCD camera. Images were acquired at the pixel size of 80 nm/pixel by using the Andor IQ3 software. Laser lines at a wavelength of 561 or 640 nm was used for excitation.
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