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17 protocols using amphotericin

1

Melanoma Cell Culture Protocol

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The assessment was performed on radial growth phase-WM35 human melanoma (Wistar Institute, Philadelphia, PA, USA) [20 (link)] cells and a highly metastatic melanoma cell line M1-15 [21 (link)], donated by professor Andras Falus, Genetics Department, University Semmelweis, Budapest. Melanoma cells were cultured in RPMI medium supplemented with 5% fetal calf serum, 50 μg/ml gentamicin and 5 ng/ml amphotericin, all from Biochrom AG (Berlin, Germany), to avoid the medium influence on the cell lines properties, as previously described [22 (link), 23 (link)]. For all experiments, the cells were used within 4 passages, to preserve their original melanoma characteristics [24 (link), 25 (link)]. Cultures were fed twice weekly and incubated in a humid atmosphere at 37°C and 5% CO2. All experiments were conducted in triplicate in subdued light, as previously described [26 (link)].
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Culturing Human Endothelial Cells and Fibroblasts

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Human umbilical vein endothelial cells (HUVEC-ECCAC obtained from Sigma Aldrich, Steinheim am Albuch, Germany) and dermal fibroblasts (BJ CRL-2522—purchased from ATCC, VA, USA) were cultured in RPMI and, respectively, Dulbecco’s modified Eagle medium (DMEM) supplemented with 5% fetal calf serum, 50 µg/mL gentamicin and 5 ng/mL amphotericin, all procured from Biochrom AG (Berlin, Germany). Cultures were fed twice weekly and incubated in standard cell culture conditions. For experiments, the concentration of 2% FCS in medium was used.
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3

Endothelial Cell Responses to Phytochemicals

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Commercial human umbilical vein endothelial cells (HUVEC) were bought from the European Collection of Cell Cultures (ECACC, Porton Down, Salisbury, UK) and multiplied in RPMI medium, supplemented with 10% fetal calf serum (FCS), gentamicin 50 μg/ml, and amphotericin 100 μg/ml (Biochrom AG, Berlin, Germany) in a humidified CO2 incubator at 37°C. Cell cultures in the 23rd to 26th passages were used. The analysis of surface markers was performed by flow cytometry (BD FACS Canto II flow cytometer, Becton Dickinson & Company, Franklin Lakes, NJ, USA) and used different monoclonal antibodies (ICAM-1, CD29, CD34, CD73, CD90, and CD105).
Cells seeded at a density of 104/cm2 in cell culture Petri dishes (TPP) were settled for 24 h in medium then exposed for 24 h to either Equisetum arvense L. extract (25 or 2.5 μg/ml), caffeic acid (10 or 1 μg/ml), and cathechin (10 or 1 μg/ml), as positive controls; afterwards, the cells were washed 3 times with PBS and incubated for 24 h either in normotonic (137 mmol/l) or hypertonic conditions (200 mmol/l). Cells were collected by scraping and treated with a lysis buffer containing IGEPAL-Nonidet 1% (Sigma) and 1% protease inhibitor complex (Sigma) in PBS for 1 h, on ice. The protein content was determined by the Bradford method (Bio-Rad, USA). All the experiments were performed in triplicate.
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4

Melanoma cell lines BRAF-V600E assay

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Two human melanoma cell lines were used: A375 (European Collection of Authenticated Cell Cultures, through Sigma Aldrich Company, St. Louis, MO, USA) and SK-MEL-28 (Cell line services, Eppelheim, Germany). Both melanoma cell lines were positive for BRAF-V600E mutation. Each cell line was seeded and maintained in Dulbecco’s modified Eagle Medium (DMEM), enriched with 10% fetal calf serum (FCS), 5 ng/mL amphotericin, and 50 μg/mL gentamicin, all reagents being from Biochrom AG, Berlin, Germany. The protocol followed standard culture conditions: cells were kept at constant temperature (37 °C) and humidity, under a 5% CO2 atmosphere, in an incubator, and were fed twice a week; all experiments were carried out in triplicate (n = 3); cells were used within a maximum of 4 passages. Dabrafenib and celecoxib were purchased from Cayman Chemical, MI, USA.
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5

Radial Growth Phase Melanoma Cell Culture

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The assessment was performed on a human radial growth phase (RGP) melanoma cell line (WM35). Melanoma cells (Wistar Institute, Philadelphia, PA, USA) were maintained in RPMI medium supplemented with 5% fetal calf serum, 50 μg/ml gentamicyn and 5 ng/ml amphotericin (Biochrom). Cultures were fed twice weekly and incubated in a humid atmosphere at 37°C and 5% CO2. All experiments were conducted in subdued light, in triplicate.
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6

Immortalized Chicken Macrophage Cell Line

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The chicken macrophage cell line HD11 is an immortalized line originated from chicken bone marrow [33 (link)]; the HD11 cells used in this study were kindly provided by the Bio Bank of the German Federal Research Institute for Animal Health, Insel Riems, Germany (Friedrich Löffler Institute, FLI). HD-11 cells were seeded in 24-well plates (5 × 104 cells/well), cultured in RPMI-1640 medium, and supplemented with 8% fetal bovine serum (FBS), 2% chicken serum (CS), 100 IU penicillin, 100 µg/mL streptomycin (ThermoFisher Scientific, Dreieich, Germany), and 2.5 µg/mL amphotericin (Biochrom, Berlin, Germany). Cultures were maintained at 37 °C in 5% CO2 until confluent.
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7

Culturing Dysplastic Oral Keratinocytes

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Evaluation was performed on dysplastic oral keratinocytes (DOK, ECCAC 94122104, Sigma Aldrich, Heidelberg, Germany) used at their 31st–32nd passage. DOK were cultured in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 5% fetal calf serum, 5 μg/mL hydrocortisone, 50 μg/mL gentamicin and 5 μg/mL amphotericin (Biochrom Ag, Berlin, Germany) in standard cell culture conditions (37 °C, 60% humidity and 5% CO2); medium was changed twice a week.
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8

HUVEC Cultivation and SB Treatment

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Human umbilical vein endothelial cells (HUVECs, Promocell, Hamburg, Germany) were used. The cells were grown in RPMI medium supplemented with 5% fetal calf serum, 50 μg/mL gentamycin, and 5 ng/mL amphotericin (Biochrom Ag, Berlin, Germany). Cell cultures in the 13rd to 15th passages were used. SB was diluted in DMSO (Biochrom Ag, Berlin, Germany) to obtain a stock solution of 1 mg/mL. The stock solution was used to make further dilutions in complete cell growth medium, immediately prior to the experiments. The final DMSO concentration was lower than 0.05%, a nontoxic concentration for the cells [31 (link)].
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9

Isolation of Mesenchymal Progenitor Cells from Osteoarthritic Bone

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Mesenchymal progenitor cells (oaMPC) were isolated from bone chips from knee joints of three individual OA patients (Table 1) with Kellgren-Lawrence grade 3 (Figure 1). In brief, the chips were cut in small fragments and washed with Hank’s saline solution (Merck, Germany). Bone fragments were digested for 4 hours with 7,680U collagenase XI (Sigma-Aldrich, USA). Afterwards, the fragments were transferred into culture flasks (Primaria, Becton & Dickinson, USA) and cultured with DMEM (Dulbecco's Modified Eagle Medium) containing 10% human serum (German Red Cross, Germany), 100U/ml penicillin, 100μg/ml streptomycin, 200nM L-glutamine, 100μg/ml gentamycin, 0.1μg/ml amphotericin (all Biochrom) and 2ng/ml FGF-2 (Peprotech, Germany) at 37°C and 5% CO2. The medium was changed every 2-3 days. After the cells reached 80-90% confluence they were detached with trypsin- EDTA/PBS (1:1 v/v) (Merck) and seeded with a cell density of 8,000 cells/cm2. The study was approved by the ethics committee of the Bavarian State Chamber of Medicine (#12045).
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10

Isolation and Culture of Gingival Mesenchymal Stem Cells

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G-MSCs were obtained from the healthy gingival collars around partially impacted third molars at the Christian-Albrechts University of Kiel, Germany. The study was performed in accordance with Helsinki Declaration revised in 2008 and approved by the Ethics Committee of Christian-Albrechts University of Kiel, Germany. Cells' isolation and culture were done as formerly described [14 (link), 15 (link)]. Briefly, gingival soft tissue collars were detached, deepithelized, cut into pieces, and washed in a basic medium, consisting of Eagle's minimum essential medium alpha modification (Sigma-Aldrich GmbH, Hamburg, Germany), with 15% fetal calf serum (FCS, HyClone, Logan, UT, USA), 400 mmol/ml L-glutamine, 100 U/ml penicillin, 100 μg/ml streptomycin, and 1% amphotericin (all from Biochrom, Berlin, Germany). The soft tissue parts were left to adhere for 30 min in dry tilted culture flasks, before the basic medium was slowly added to them. The flasks were incubated at 37°C with 5% CO2 to let the cells grow and reach 80% confluence. The basic medium was replaced three times/week.
Immunomagnetic cell sorting employing anti-STRO-1 antibody (BioLegend, San Diego, CA, USA) and anti-IgM MicroBeads (Miltenyi Biotec, Bergisch Gladbach, Germany) were used to isolate the G-MSCs as described before [14 (link)]. The obtained G-MSCs were cultured in a basic medium.
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