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Silica gel 60 plate

Manufactured by Merck Group
Sourced in Germany, United States

Silica gel 60 plates are thin-layer chromatography (TLC) plates used for separation and analysis of a wide range of organic and inorganic compounds. The plates are coated with a layer of silica gel, which acts as the stationary phase. The silica gel has a particle size of 60 Å, providing a high surface area for efficient separation of analytes.

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129 protocols using silica gel 60 plate

1

Magnetosome Lipid Extraction and Analysis

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Lipids were extracted from magnetosomes as described previously.21 (link) In brief, a 2 mg magnetosome sample was suspended in 950 mL chloroform-methanol solution (chloroform/methanol/distilled water 1:2:0.8), incubated for 2 hours, and lipid and non-lipid fractions were separated using a Nd-Fe-B magnet. The same volume of chloroform-methanol solution was used to extract equivalent amounts SDS-treated magnetosomes, GM1-magnetosomes, and GM3‒magnetosomes. Purified lipid fractions were subjected to HPTLC (silica gel 60 plates; Merck, Whitehouse Station, NJ, USA) with chloroform/methanol/water (65:35:4, v/v/v) as developing solvent, and visualized using iodine.
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2

Lipid Classes Separation by TLC

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Lipid classes were separated on silica gel 60 plates (Merck) by one-dimensional TLC using a solvent system composed of chloroform: methanol: acetic acid: water (25:15:4:2, by vol.). Lipid standards were run on each plate alongside the samples to be analysed. Radioactive lipids were detected by scanning the air-dried plate with a radioisotope detector (Berthold Technologies) and quantified using the Rita Star software provided by the manufacturer.
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3

Sterol Acetylation and Export Assay

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Acetylation and export of sterols into the culture supernatant was examined as previously described (Tiwari et al., 2007 (link)). Heme (hem1Δ) -deficient yeast cells were cultivated in presence of Cholesterol/Tween 80 containing media and labeled with 0.025 μCi/ml [14C] cholesterol (American Radiolabeled Chemicals Inc, St. Louis, MO,USA). Cells were harvested by centrifugation, washed twice with synthetic complete (SC) media, diluted to an O.D.600 of 1 into fresh SC media containing non-radiolabeled cholesterol and grown overnight. Cells were centrifuged and lipids were extracted from the cell pellet and the culture supernatant using chloroform/methanol (v/v 1:1). Samples were dried and separated by thin-layer chromatography (TLC) using silica gel 60 plates (Merck, Darmstadt, Germany) using the solvent system, petroleum ether / diethyl ether /acetic acid (70:30:2; per vol.). Radiolabeled lipids on the TLC were quantified by scanning with a Berthold Tracemaster 40 Automatic TLC-Linear Analyzer (Berthold Technologies, Bad Wildbad, Germany). TLC plates were then exposed to phosphorimager screens and radiolabeled lipids were visualized using a phosphorimager (Bio-Rad Laboratories, Hercules, CA, USA).
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4

Lipid Profiling of Mosquitoes under Dietary Interventions

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Mosquitoes (200 individuals) were fed ad libitum for six days in the presence or absence of Rv, Compound C, Compound C + Rv, AICAR, polyphenols or an antibiotic mix. Twenty insects were separately homogenized and subjected to lipid extraction using methanol: chloroform: distilled water (2:1:0.8 v/v). The lipid extracts were analyzed by one-dimensional thin-layer chromatography (TLC) on Silica Gel 60 plates (E. Merck, Darmstadt, Germany) for neutral lipids using n-hexane:diethyl ether:acetic acid (60:40:1 v/v) [28 (link),29 (link)]. Cholesterol, cholesteryl-oleate, glycerol-tryoleate, diolein, oleoyl-glycerol and oleic acid (Sigma-Aldrich Co, USA) were used as standards. The lipids were visualized using a charring reagent (Cu2SO4) after heating at 200°C for 20 min [28 (link)–30 (link)]. TLCs were scanned, and the densitometry of the bands was assessed using the ImageJ program.
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5

Lipid Extraction and Transesterification from Yeast and C. ellipsoidea

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For the analysis of lipids from yeast and C. ellipsoidea, the cells were harvested by centrifugation, and the resulting cell pellets were ground to a fine powder under liquid nitrogen and subsequently treated with isopropanol at 80 °C for 10–15 min to stop the lipolytic activity. Isopropanol was evaporated under nitrogen gas before lipid extraction. The total lipids were extracted according to a modified version of the Bligh and Dyer method [64 (link)], and TAG was separated from the total lipids by thin-layer chromatography (TLC) on Silica Gel 60 plates (Merck, Darmstadt, Germany). The solvents that were used were hexane/diethyl ether/glacial acetic acid (70:30:1, v/v). The lipids were visualized by spraying Primuline (Sigma, 10 mg/100 mL acetone: water (60:40 v/v)) and exposing the plate to UV. Triolein (Sigma) was used as the standard. TAGs were recovered from the TLC plates and then trans-esterified with 5% H2SO4 in methanol at 85 °C for 1 h. The fatty acid methyl esters (FAMEs) were extracted with hexane and analysed by GC-MS following the methods described in the following section.
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6

Lipid Extraction and Characterization Protocol

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Organ homogenates, hemolymph, and midgut luminal contents were subjected to lipid extraction (Blight and Dyer, 1959 (link)). The organic phases containing the lipids were dried under a stream of nitrogen, and lipids were resuspended in 30 μl of chloroform and analyzed by high-performance thin-layer chromatography (HPTLC) on Silica gel 60 plates (Merck, Darmstadt, Germany) developed in hexane:ethyl ether:acetic acid (60:40:1) as solvent (Kawooya and Law, 1988 (link)). The following commercial lipid standards were used: cholesterol, cholesteryl ester, free fatty acid, monoacylglycerol, diacylglycerol, and TAG (Sigma–Aldrich, St. Louis, MO, United States). Plates were stained with iodine vapor, the spots corresponding to free and esterified cholesterol were scraped, and the lipids were eluted three times from the silica with chloroform:methanol:water (1:2:1). The lipids were extracted from the supernatants in chloroform, and the radioactivity was determined by scintillation counting.
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7

Lipid Extraction and Quantification in Parasites

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Total parasite lipids were extracted56 (link) and separated by one-dimensional thin layer chromatography (TLC) on Silica Gel 60 plates (Merck, Darmstadt, Germany) in solvent system 1 composed of chloroform:methanol:acetic acid:water (25:15:4:2; v/v/v/v)57 (link). Lipids were visualized by exposure to iodine vapor. For in vivo labeling experiments, parasites at mid-log phase were cultured in the presence of [3H]-serine for indicated times and lipids were extracted as above. After separation by TLC, [3H]-labeled lipids were analyzed by scanning the air-dried plate with a radioisotope detector (Berthold Technologies, Regensdorf, Switzerland). Quantification of radiolabeled lipids was done using the Rita Control software provided by the manufacturer. On each TLC plate, appropriate lipid standards were carried alongside. For lipid phosphorus quantification, total lipids were separated by two-dimensional TLC using solvent system 2 composed of chloroform:methanol:25% NH3:water (45:37:6:4; v/v/v/v) for the first dimension and solvent system 3 composed of chloroform:methanol:acetone:acetic acid:water (40:15:15:12:8; v/v/v/v) for the second dimension57 (link). After exposure to iodine, lipid spots were scraped from the plates and lipid phosphorus was quantified photometrically58 (link).
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8

NMR and Mass Spectrometric Analysis

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NMR spectra were recorded with a Bruker AVANCE-500 spectrometer at a sample temperature of 298 K. NMR spectra were recorded in CDCl3 or CD3OD and calibrate using the TMS signal as internal reference. Mass spectrometric analysis were performed in positive or negative ESI-MS. Mass spectra were recorded on a Thermo Quest Finningan LCQTM DECA ion trap mass spectrometer, equipped with a Finnigan ESI interface; data were processed by Finnigan Xcalibur software system. All reactions were monitored by TLC on silica gel 60 plates (Merck).
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9

Fatty Acid Profiling from Tissues

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FAs were extracted from ~20 mg lung tissue, homogenized in 10 µL phosphate-buffered saline with protease inhibitor (homogenization buffer) per 1 mg tissue, or from ~200 µL RBCs or peripheral blood mononuclear cells (PBMCs) collected as buffy coat. Lipids were extracted from each lipid pool with chloroform: methanol (2:1, v:v; containing 0.01% butylated hydroxytoluene) by a modification of the method of Folch et al. [28 (link)]. The lipid extracts were concentrated and the neutral lipids separated from the phospholipids by thin-layer chromatography (TLC) (silica gel 60 plates, Merck) and eluted with diethyl ether: petroleum ether: acetic acid (30:90:1, v:v:v). The lipid band containing phospholipids was removed from the TLC plate and transmethylated with methanol: sulfuric acid (95:5, v:v) at 70 °C for 2 h to form fatty acid methyl esters (FAME). FAMEs were analyzed with an Agilent Technologies 7890A gas chromatography system equipped with an Agilent Technologies 7000B triple quad mass selective detector (Agilent Technologies, Santa Clara, CA, USA) and quantification performed with Masshunter (B.06.00). Relative percentages of FAs (% w/w) were calculated by taking the concentration of a given FA as a percentage of the total concentration of all FAs identified in the sample.
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10

Lipid Extraction and MAME Purification

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The MAs and the total extractable lipids were extracted and analyzed as described previously16 (link), except that the (HP)TLC plates for MAME separation were developed in ether/diethyl ether (9:1, v/v, five runs). Purification of MAMEs and compound Z was performed by preparative TLC using silica gel 60 plates (Merck) developed in the above eluent; the compounds were then scraped off and extracted from silica gel three times with diethyl ether.
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