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13 protocols using gsk3α β

1

Protein Expression Analysis by Western Blot

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Thirty μg of protein were subjected to 10% SDS-PAGE to run polyacrylamide gel electrophoresis (PAGE) to separate individual proteins, and then transferred onto PVDF membrane (IPVH00010; Millipore) on a semi-dry transfer apparatus (Hoefer). Then the PVDF membrane was incubated with primary antibodies dCK (Abcam; ab96599, Lot: GR3303586-1), hENT1 (Sigma-Aldrich; B5500117, Lot: GR3217413-6), pAKTSer473 (Cell Signaling Technology; #4060, Lot: 25), AKT (Cell Signaling Technology; #9272, Lot: 27), pGSK3βSer9 (Cell Signaling Technology; #9336, Lot: 13), GSK3α/β (Santa Cruz; SC-7291), and Gli2 (Invitrogen; #PA5-79314, Lot: VG3044693) at 4°C overnight for immunoblotting. The β-actin (Santa Cruz; SC-47778) and β-tubulin (Cell Signaling Technology; #2146) was served as a loading control. Anti-rabbit IgG (Jackson ImmunoResearch; #118578) or anti-mouse IgG (Jackson ImmunoResearch; #120646) antibody conjugated with horseradish peroxidase (HRP) was used as a secondary antibody. The protein expression was developed by using an enhanced chemiluminescence kit (Amersham), and then detected by Fujifilm LAS-3000 imager. Quantitation of the results was carried out by an image analysis system installed with a software UN-SCAN-IT gel 6.1.
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2

Protein Expression Analysis in Cells

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Cultured cells were lyzed and animal tissues homogenized in radioimmunoprecipitation assay supplemented with protease inhibitors and samples were processed for immunoblot analysis. The antibodies against GSK3α/β, podocin, WT1, synaptopodin (SYNPO), Nrf2, Desmin, HO-1, MCP-1, glyceraldehydes-3-phosphate dehydrogenase (GAPDH), were purchased from Santa Cruz Biotechnology.
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3

Antibodies and Inhibitors for JAK-STAT Signaling

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Anti-p-JAK1 (Tyr1022/1023), p-JAK2 (Tyr1007/1008), p-FAK (Tyr397), and p-GSK3α/β (ser21/9) antibodies were purchased from Cell Signaling Technology (Danvers, MA, US). JAK1 and JAK2 were obtained from Elabscience (Houston, TX, US). U0126 was purchased from MCE (Monmouth Junction, NJ, US). JAK1 was purchased from Merck Millipore (Temecula, CA, US). Leptin was obtained from PeproTech (Rocky Hill, NJ, US). Anti-ICAM-1, ObR, FAK, p-ERK1/2, ERK, GSK3α/β antibodies, and ObR and control small interfering (si)RNAs were purchased from Santa Cruz Biotechnology (Santa Cruz, CA). Stattic was purchased from Selleckchem (Houston, TX, US). AG490, PF573228, SB216763, anti-GAPDH, α-tubulin, and β-actin antibodies were obtained from Sigma-Aldrich (St. Louise, MO, US). Anti-p-GSK3β (Tyr216/279) and Anti-ICAM-1 antibodies were obtained from Thermo Scientific (Waltham, MA, US). Recombinant soluble ICAM-1 was purchased from KingFisher Biotech (Saint Paul, MN, US).
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4

Comprehensive Protein Analysis in Tissue Samples

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We employed antibodies against the following: IRβ (catalog 3025, Cell Signaling Technology), Laminin γ1 (catalog sc-5584, Santa Cruz Biotechnology), fibronectin (catalog ab2413, Abcam), type I collagen α2 (catalog 14695-1-AP, Proteintech), phospho-Ser9-GSK3β (catalog 9323, Cell Signaling Technology), GSK3α/β (catalog sc-56913, Santa Cruz Biotechnology), phospho-Ser539-eIF2Bε (catalog 44-530G, Thermo Fisher Scientific), eIF2Bε (catalog 3595, Cell Signaling Technology), phospho-Ser2448-mTOR (catalog 2971, Cell Signaling Technology), mTOR (catalog 2972, Cell Signaling Technology), phospho-Thr389-p70S6 kinase (catalog 9205, Cell Signaling Technology), p70S6 kinase (catalog 9202, Cell Signaling Technology), CBS (catalog sc-67154, Santa Cruz Biotechnology), CSE (catalog sc-135203, Santa Cruz Biotechnology), IGF-1 receptor (catalog 3027, Cell Signaling Technology), phospho-Thr202/Tyr204-Erk (catalog 4377, Cell Signaling Technology), Erk (catalog 9102, Cell Signaling Technology), phospho-Ser473-Akt (catalog 9271, Cell Signaling Technology), Akt (catalog 9272, Cell Signaling Technology), nephrin (catalog ab58968, Abcam), and actin (catalog A2066, MilliporeSigma). Commercial ELISA kits were used for measuring phospho-Tyr-1150/1151-IR (catalog 7082, Cell Signaling Technology) and phospho-Ser79-ACC (catalog 7986, Cell Signaling Technology).
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5

Quantification of GSK-3α/β Protein Levels

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Cells were harvested and lysed in modified protein lysis buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 0.1% sodium dodecyl sulfate [SDS], 1% NP-40, 0.02% sodium azide) added with 1% proteinase inhibitor cocktail (Sigma-Aldrich). The protein concentration was measured by the Bradford method.15 (link) Equal amounts of sample lysates were separated by SDS-PAGE and electrophoretically transferred onto a nitrocellulose membrane. The membrane was blocked with 5% nonfat dried milk in TBST buffer (20 mM Tri-HCl, pH 7.4, 150 mM NaCl, and 0.1% Tween-20) and incubated overnight at 4°C with the antibodies against GSK-3α/β (1:500 mouse monoclonal antibody) and β-actin (1:1,000 mouse monoclonal antibody; Santa Cruz Biotechnology), respectively. The membrane was washed with TBST buffer and incubated with appropriate secondary antibodies. The protein bands were visualized using the enhanced Pierce chemiluminescence kits (Thermo Fisher Scientific). Signal data was normalized for β-actin bands, and a mean value was calculated from three independent experiments.
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6

Protein Lysate Preparation and Antibody Detection

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Protein lysates were collected using RIPA lysis buffer (1% Triton X-100, 50 mM HEPES, 150 mM NaCl, 1.5 mM MgCl2, 1 mM EGTA, 100 mM NaF, 10 mM Na pyrophosphate, 1 mM Na3VO4, 10% glycerol) or 1x Cell Signaling Lysis Buffer with 1 mM PMSF, supplemented with protease (mini-Complete) and phosphatase (phosStop) inhibitors (Roche Diagnostics Corporation, Indianapolis, IN). Primary antibodies were rabbit polyclonal antibodies against phospho-p70S6K (Thr389), LKB1 clone 27D10, phospho-ACC Ser79 clone D7D11, phospho-AMPKα (Thr172) clone D79.5E, phospho-ribS6 clone D57.2.2E, p70 S6 clone 49D7, phospho-Erk1/2 clone 197G2, Erk1/2 #9102, Akt #9272, phosphor-Akt (Ser473), phosphor-GSK-3α/β (Ser21/9) #9331 (Cell Signaling Technology, Danvers, MA); and mouse monoclonal antibodies against, GSK-3α/β (Santa Cruz Biotechnology, Inc., Santa Cruz, CA), GAPDH clone 6C6 (Novus Biologicals, Inc., Littleton, CO), vinculin clone H-10 (Santa Cruz Biotechnology, Inc., Santa Cruz, CA), and ribS6 clone 54D2 (Cell Signaling Technology).
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7

Characterization of human NPC and S18 cell lines

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The human NPC cell line CNE-1 was cultured and conserved by Sun Yat-sen University cancer center from 1982 and have been used in previous study [41 (link)], and the S18 cell line is a single cell clone of CNE-2 (a kind gift from Dr. Chao-Nan Qian in 2011, China) [55 (link)] and has also been used in previous study [22 (link)]. Both cell lines were authenticated by Applied Biosystems on Nov 16, 2012 via STR analysis. 293T cell line was obtained from the American Type Culture Collection in 2010. The cells were cultivated in DMEM medium supplemented with 10% fetal bovine serum in a 5% CO2 humidified atmosphere at 37°C. GAPDH, AKT, phospho-AKT (Ser473), phospho-AKT (Thr308), GSK3α/β, cleaved PARP, p27, Sox2, α-tubulin primary antibodies and a horseradish peroxidase-conjugated secondary antibody were purchased from Santa Cruz Biotechnology (California, CA, USA). Anti-phospho-FKHRL1, phospho-GSK3β, and chemiluminescence reagents were obtained from Cell Signaling Technology (Beverly, MA, USA). Hoechst 33342, Fumitremorgin C (FTC), DAPI, MTT and DMSO were acquired from Sigma-Aldrich (St. Louis, MO, USA).
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8

Signaling Pathway Analysis Techniques

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The following antibodies were used: NF-κB p65 (western blot 1:1,000, rabbit, Cell Signaling, #8284), GAPDH (Western blot 1:3,000, mouse, Santa Cruz, #sc-47724), phospho (Ser 473) Akt (Western blot 1:1,000, rabbit, Cell Signaling, #9271), Akt (Western blot 1:1,000, rabbit, Cell Signaling, #9272), phospho (Ser21/9) GSK-3α/β (Western blot 1:1,000, rabbit, Cell Signaling, #9331), GSK-3α/β (Western blot 1:1,000, mouse, Santa Cruz, #sc-7291), phospho (Ser675) β-catenin (Western blot 1:1,000, rabbit, Cell Signaling, #4176), β-catenin (Western blot 1:1,000, mouse, BD Biosciences, #610154), Histone H3 (Western blot 1:1,000, rabbit, #4499), non-phospho (active) β-catenin (Western blot 1:500, rabbit, Cell Signaling, #8814), IκB-α (Western blot 1:1,000, rabbit, Santa Cruz, #sc-203), acetyl NF-κB p65 (Lys310) (Western blot 1:500, rabbit, Cell Signaling, #3045), and normal mouse IgG (Santa Cruz, #sc-2025).
Other reagents include the following: DMSO (Sigma Aldrich, #472301), ICG-001 (Tocris, #4505), XAV-939 (Tocris, #3748), IQ-1 (Tocris, #4713), FBS (Thermo Scientific, #SV30180.03), and recombinant IL-1β (Sigma Aldrich, #SRP3083). All other chemicals were of analytical grade.
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9

Protein Expression Analysis Protocol

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Cells were lysed in RIPA lysis buffer (50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1% NP40, 0.25% sodium deoxycholate, 1 mM phenylmethylsulfonylfluoride, protease inhibitor mixture (Sigma, St. Louis MO, USA), 1 mM sodium orthovanadate). Equivalent amounts of protein lysate were separated by SDS-PAGE, transferred to PVDF membrane and incubated with the followed primary antibodies: β-actin, E-cadherin, GFP, β-catenin, GSK3-αβ (Santa Cruz Biotechnology, Santa Cruz, CA, USA), p-GSK3β (Cell Signaling, Danvers, MA, USA), DPEP1(Sigma, St. Louis MO, USA). The bound antibodies were visualized with a suitable secondary antibody conjugated with horseradish peroxidase using enhanced chemiluminescence (Amersham Bioscience, Pittsburgh, PA, USA).
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10

Adipocyte Differentiation and Protein Analysis

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3T3-L1 MBX cells (3 × 104 cells/well) were seeded in 60 mm cell culture dishes and differentiated for 8 days. The cells were lysed in a buffer containing 50 mM Tris (pH 7.4), 150 mM NaCl, 1% NP40, 0.1% sodium dodecyl sulfate (SDS), 0.25% sodium deoxycholate, 1 mM orthovanadate, aprotinin (10 μg/ml), and 0.4 mM phenylmethylsulfonyl fluoride at 4°C for 30 min. Equal amounts of total cellular protein (50 μg) isolated from the harvested cells were separated by SDS-PAGE and transferred onto a PVDF membrane (Choi et al., 2022 (link)). Specific proteins were detected using antibodies against PPARγ, CCAAT/enhancer-binding protein (C/EBP) α, phosphorylated protein kinase B (PKB/AKT), glyceraldehyde 3-phosphate dehydrogenase (GAPDH), C/EBPβ, β-actin and phosphorylated glycogen synthase kinase three α/β (GSK3 α/β) (Santa Cruz Biotechnology, Santa Cruz, CA, United States ). Antibodies against fatty acid synthase (FAS) and acetyl-CoA carboxylase (ACC) and glucose transporter type 4 (GLUT4) were purchased from Cell Signaling Technology (Danvers, MA, United States).
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