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24 protocols using rnastore reagent

1

Lung Tissue Harvesting and Preservation

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On the 14th day, according to the approved protocol, the mice were sacrificed. The lungs were isolated and weighed for the organ index calculation. After harvesting, small tissue samples were immediately submerged in RNAstore Reagent (Tiangen) at a dilution ratio of 1 : 10 (w/v) and then stored at 4°C.
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2

Organ Index Calculation in Mice

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On the 14th day, mice were subjected to anesthesia with 3.5-4.5% isoflurane, when animals were monitored for loss of righting reflex and the breathing pattern had become deeper and slower, then sacrificed by cervical dislocation. The lung, heart, liver, and kidney tissues were isolated, and weighed for the organ index calculation, using the following formula: Visceral index=weight of organ x100/bodyweight. Following harvesting, small tissue samples were immediately submerged in RNAstore Reagent (Tiangen Biotech Co., Ltd.) at a dilution ratio of 1:10 (w/v), and stored at 4˚C until use.
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3

Rearing and Sampling of Bactrocera dorsalis

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The stock colony of B. dorsalis was originally collected from Fujian Province, China. Insects were maintained under constant temperature at 27 ± 1°C, 75 ± 5% relative humidity, and a photoperiod cycle of 14:10 h light:dark. Insects were reared as previously described38 (link).
Samples including eggs, 1–8-day-old larvae, 1–10-day-old pupae, and 1–19-day-old female adults were collected at 3-day intervals. In the tissue-specific experiment, 5-day-old larvae and 5–6-day-old adults were used for tissue isolation. The insects were dissected individually in saline solution using dissecting needles under a microscope (Olympus SZX12, Tokyo, Japan). Larval tissues, including the fat body, integument, midgut, Malpighian tubules, and trachea, and adult tissues including head (without antennae), thorax (without legs), antennae, legs, fat body, midgut, Malpighian tubules, ovary, and testis, were collected. All tissue samples were stored in RNAstore Reagent (Tiangen Biotech, Beijing, China) at −80°C until used for RNA extraction. Three replicates were run per sample.
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4

Lung Cancer Specimen Collection and RNA Extraction

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Specimens were collected from patients who underwent bronchoscopic biopsy for lung cancer in Shanghai Pulmonary Hospital from 2013 to 2015, with the approval of the Ethics committee of Tongji University. All patients involved in this study provided written informed consent for the use of their tissue samples in this study. The specimens that were confirmed to be SCC by pathological examination were used for the following experiments. Detailed clinical information is shown in Table 1. All specimens were immediately preserved in the RNA store reagent (Tiangen Biotech, Beijing, China) at 4°C until total RNA extraction.
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5

WSSV Infection Dynamics in L. vannamei

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The experiment was divided into three groups, with fifty shrimp per group. To detect the distribution of LvCLEC4F, the hepatopancreas, gill, muscle, and eyestalk of healthy L. vannamei were collected. Three shrimp from every group were taken. The remaining L. vannamei were individually orally infected with the WSSV bait. The viral load of the WSSV bait was 1 × 107 copies. The hepatopancreas, gill, muscle, and eyestalk of L. vannamei at 24, 48, 72, 96, 144, 192, and 228 h post-WSSV infection were collected and stored in RNAstore reagent (Tiangen Biotech Co., Ltd., Beijing, China) at −80 °C. Three individual shrimp from each group were taken at every sampling time. The collected samples were used for total RNA extraction and cDNA synthesis to assess the expression level of LvCLEC4F.
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6

Rats Euthanasia and Organ Analysis

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Rats were euthanized with an overdose of isoflurane (5% isoflurane with 2 L/min oxygen). The viscera (lung, heart, liver, and spleen) were rapidly dissected, and then the heart was separated into the RV and the left ventricle (LV) with interventricular septum (IVS) and then weighed separately. Finally, the viscera weight/body weight and the ratio of the weight of right ventricular wall to the weight of left ventricular wall plus IVS [RV/(LV+IVS)] were measured and calculated as indices of right ventricular hypertrophy.
After weighing, the upper left lung and heart were fixed in 4% buffered paraformaldehyde and underwent hematoxylin/eosin staining. Pulmonary arterial vascular remodeling was blindly measured by the % of wall thickness (total diameter–internal diameter/total diameter) through H&E staining at 200× magnification, with five arteries per lung section. The heart was stained using TUNEL (Roche, Mannheim, Germany) according to the manufacturer’s instructions. Apoptotic cells were counted under a microscope at 400× magnification, and five regions were randomly selected from each section. The apoptosis rate was expressed as the ratio of apoptotic cells to total cells in the same visual field. The RV was divided and stored at -80°C for immunoblotting or placed t in RNAstore reagent (TIANGEN Biotech, Co. Ltd., Beijing, China) for PCR analysis.
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7

Rat Kidney Transcriptome and Histology

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Rat kidneys were collected immediately after being sacrificed. The cortex of the right kidneys from three rats in each group was dissected and stored in RNA store reagent (Tiangen Biotech, Beijing, China) at 4°C overnight and later stored in -80°C for RNA extraction and transcriptome sequencing. The remaining kidney tissues were fixed in 4% paraformaldehyde and paraffin-embedded. The tissue sections (4 μm) were stained with hematoxylin and eosin (HE), Masson trichrome, and Periodic Acid-Schiff (PAS) and examined under a light microscope. At least 5 random positive areas in each section were photoimaged (magnification ×400) and analyzed using ImageJ (National Institutes of Health, USA).
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8

Colorectal Cancer Tissue Collection Protocol

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CRC tissues and matched adjacent tissues were surgically resected from six patients with CRC and were obtained from the Second Hospital of Hebei Medical University, Shijiazhuang, China. The diagnosis and histological Evaluation of CRC were performed by two pathologists. After excision, tissues were immediately placed at −80 °C, or immediately stored in RNAstore Reagent (Tiangen, Beijing, China), or fixed in 4% paraformaldehyde (Shijiazhuang Huawo Kerui Biological Technology Co., Ltd., Hebei Province, China). This study was approved by the Ethics Committee of the Second Hospital of Hebei Medical University (approval letter No. 2017- R028), and informed consent forms were obtained from all patients.
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9

Cardiac Gene Expression Analysis

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Heart tissues were stored in RNAstore Reagent (#Q5324, TIANGEN). Total RNA was extracted from heart tissues or cardiac myocytes using TRIzol reagent (Invitrogen, United States) according to the manufacturer’s instructions. cDNA was synthesized with the PrimeScriptTM RT Reagent Kit (TAKARA, Japan). RT-PCR was carried out using the SYBR Green premix Ex TaqⅡKit (Roche, Germany). Expression of PPARγ2, BNP, and β-MHC mRNA in heart tissues and BNP and ANP mRNA in cardiomyocytes was measured using RT-PCR. After the reaction system was completed, all gene levels were analyzed according to the Cq values. Primer sequences were as described in Table 1. The protocol of PCR was as follows: 95.0°C for 0.5 min, 95.0°C for 5 s, 60°C for 34 s, more than 39 cycles of 95.0°C for 5 s, with additional melt curve program included (Thornton and Basu, 2015 (link)).
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10

Lung Cancer Specimen Collection

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Specimens were collected from patients who underwent surgical resection for lung cancer or suspected lung cancer patients through bronchoscopic biopsy at Shanghai Pulmonary Hospital from 2013 to 2015, with the approval of the Ethics Committee of Tong Ji University. All patients involved in the present study had provided written informed consent for the use of their tissue samples in the present study. The specimens that were confirmed to be SCLC or normal (tumor negative) by pathological examination were used for the following experiments. Detailed clinical information is shown in Table I. All specimens were immediately preserved in RNAstore reagent (Tiangen Biotech, Beijing, China) at 4°C until total RNA extraction.
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