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3 protocols using mouse anti mre11

1

Visualizing DNA repair protein foci

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Cells were cultured onto 22 × 22 coverslip or eight-well Nunc chamber slides. To detect MRE11, WRN, BLM, RPA32 or pS4/8-RPA32 foci, we performed pre-extraction for 5 min on ice in CSK buffer followed by fixation with 4% PFA/PBS for 10 min, permeabilization in 0.5% Triton X100/PBS for 15 min and blocking in 10% FBS/PBS for 1 h, as described elsewhere22 (link). Cells were incubated with specific primary antibody: rabbit anti-WRN (Abcam); rabbit anti-phosphoS4/8RPA32 (Bethyl); mouse anti-RPA32 (Calbiochem); mouse anti-MRE11 (Abcam); and goat anti-BLM (Santa Cruz), for 2 h at room temperature diluted in 1%BSA/PBS, followed by species-specific fluorescein-conjugated secondary antibodies (Alexa Fluor 594 Anti-Rabbit or Alexa Fluor 488 Anti-Mouse), and counterstained with 0.5 μg ml−1 4,6-diamidino-2-phenylindole (DAPI). Slides were analysed with Eclipse 80i Nikon Fluorescence Microscope, equipped with a VideoConfocal (ViCo) system. For each time point, at least 100 nuclei were scored at × 40. Detailed information on antibodies and their usage can be found in Supplementary Information Online.
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2

Comprehensive Antibody Toolkit for Cellular Analyses

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Antibodies used in MIRA, immunofluorescence, and Western blot assays are as follows: mouse anti-biotin (Sigma-Aldrich, BN-34), rabbit anti-biotin (1:200; Cell Signaling Technology, D5A7), rabbit anti-TFAM (Abcam, ab131607), mouse anti-MRE11 (Abcam, ab214), rabbit anti-cGAS (Novus, NBP1-86761), mouse anti-mitochondria (Abcam, ab3298), pY701 STAT1 (Cell Signaling Technology, 9167), STAT1 (Cell Signaling Technology, 9176, 14995), mouse anti-DNA (EMD Millipore, CBL186), rabbit anti-LC3A/B (Cell Signaling Technology, D3U4C), mouse anti-oxphos (Abcam, ab3601), mouse anti-BrdU (BD Pharmingen, 555627), rabbit anti-pS366 STING (Cell Signaling Technology, 50907), rabbit anti-TMEM173 (STING; Abcam, ab227704), and mouse anti-RAD51C (Abnova, H00005889-M01).
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3

In situ PLA and Immunofluorescence for WRN and MRE11

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The in situ PLA in combination with immunofluorescence microscopy was performed using the Duolink II Detection Kit with anti-Mouse PLUS and anti-Rabbit MINUS PLA Probes, according to the manufacturer's instructions (Sigma-Aldrich).
To detect proteins, we used rabbit anti-WRN (Abcam) and mouse anti-MRE11 (Abcam) antibodies. Detailed information on antibodies and their usage can be found in Supplementary Information Online.
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