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2 protocols using rabbit anti denv ns3

1

Western Blot Analysis of DENV Infection

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U2OS cells were transfected with the indicated plasmids using XtremeGene360 (Roche). When specified, cells were infected with DENV for the indicated timepoints. Cells were lysed in 1x RIPA + protease inhibitor + 0.1% SDS cocktail (Sigma). Lysates were sonicated prior to being separated by SDS PAGE using a 4-20% Tris-glycine polyacrylamide pre-cast gel (BioRad) and transferred to nitrocellulose membranes. Following 30 min of blocking in PBS + 10% non-fat milk, membranes were probed with the indicated primary antibodies: mouse anti-V5 (Invitrogen), rabbit anti-GFP (Proteintech), mouse anti-GFP (Proteintech), mouse anti-actin (Proteintech, rabbit anti-actin (Proteintech), and rabbit anti-DENV NS3 (GeneTex) followed by near-infrared dye-conjugated secondary antibodies (LiCor) diluted in PBST + 5% non-fat milk and imaged on an Odyssey CLx imaging system (LiCor).
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2

Immunoblot Analysis of Viral Proteins

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Cells were lysed in a modified radioimmunoprecipitation assay (RIPA) buffer (10 mM Tris (pH 7.5), 150 mM NaCl, 0.5% sodium deoxycholate, and 1% Triton X-100) supplemented with protease inhibitor cocktail (Sigma) and phosphatase inhibitor cocktail II (Millipore, Burlington, MA, USA), and post-nuclear lysates were harvested by centrifugation. Quantified protein (between 5 and 15 µg) was added to a 4× SDS protein sample buffer (40% glycerol, 240 mM Tris-HCl (pH 6.8), 8% SDS, 0.04% bromophenol blue, 5% beta-mercaptoethanol), resolved by SDS/PAGE, transferred to nitrocellulose membranes in a 25 mM Tris-192 mM glycine-0.01% SDS buffer, and blocked in StartingBlock buffer (Thermo-Fisher). Membranes were incubated with primary antibodies for 2 h at room temperature. After washing with PBS-T buffer (1× PBS, 0.05% Tween 20), membranes were incubated with species-specific horseradish peroxidase-conjugated antibodies (Jackson ImmunoResearch, West Grove, PA, USA, 1:5000) followed by treatment of the membrane with Clarity enhanced chemiluminescence (ECL) (BioRad) and imaging on X-ray film. The following antibodies were used for immunoblot: rabbit anti-GFP (Thermo-Fisher, 1:5000), rabbit anti-ZIKV NS3 (GeneTex, Irvine, CA, USA 1:5000), rabbit anti-DENV NS3 (GeneTex, 1:5000), anti-FLAG M2 (Sigma, 1:5000), and mouse anti-Tubulin (Sigma, 1:5000).
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