The largest database of trusted experimental protocols

Ficoll paque

Manufactured by Cytiva
Sourced in Sweden, United Kingdom, United States, Germany, Canada

Ficoll-Paque is a density gradient medium used for the separation and isolation of cells and cellular components from complex biological samples. It operates on the principle of density-gradient centrifugation to selectively separate different cell types or subcellular fractions based on their distinct densities.

Automatically generated - may contain errors

225 protocols using ficoll paque

1

Isolation and Differentiation of Human Monocytes and Neutrophils

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blood from healthy subjects was obtained from the Blood collection center of Angers (agreement ANG 2003-2). Human peripheral blood mononuclear cells (PBMCs) were isolated by Ficoll-Paque (Amersham Biosciences, Uppsala, Sweden) density-gradient centrifugation. To generate Mϕ, monocytes were purified from PBMC by positive selection using anti-CD14 mAb-coated magnetic beads (Miltenyi Biotech, Bergisch Gladbach, Germany); purity was >99% (data not shown). Purified CD14+ monocytes (1 × 106 cells/ml) were differentiated into Mϕ by 5-day culture with 20 ng/ml M-CSF (Biotechne) and 2 ng/ml GM-CSF (CellGenix, Freiburg, Germany) in complete medium (CM), consisting of RPMI 1640 medium containing 2 mM l-glutamine, antibiotics (all from Lonza, Verviers, Belgium), and 10% (v/v) heat-inactivated fetal calf serum (Biowest, Nuaillé, France). After Ficoll-Paque centrifugation, neutrophils were isolated from erythrocytes by 1.5% (w/v) dextran (Amersham Biosciences) density-gradient sedimentation. Contaminating red blood cells were lysed by hypo-osmotic shock. Purity was routinely >98% (data not shown).
+ Open protocol
+ Expand
2

RNA-seq Analysis of SLE PBMCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ten milliliters of blood were collected from both SLE patients and healthy donors using heparin tubes. PBMCs were isolated from the samples via Ficoll-Paque PLUS centrifugation, following standard protocols (Ficoll-Paque™, Cytiva). The samples were stored in -80°C after lysis with TRizol (TRIzol™ Reagent, Thermo Fisher). Total RNA was extracted and quality checked by agarose gel electrophoresis, Nanodrop, Qubit and Agilent 2100. The NEBNext® Ultra™ RNA Library Prep Kit was employed for RNA library preparation, and samples were sequenced using paired-end 150 bp reads on an Illumina platform at Novogene, Beijing, China. To ensure data quality, raw RNA sequencing data underwent quality control using Fastp [21 (link)]. Reads were mapped to the hg38 human genome from Gencode V44 utilizing the STAR alignment algorithm [22 (link)], and gene-level read counts were quantified using featureCounts [23 (link)].
+ Open protocol
+ Expand
3

PBMC Isolation and Cryopreservation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blood from heparin tubes was processed within 3 h of collection. Peripheral blood mononuclear cells (PBMC) were isolated using Ficoll-Paque by density gradient sedimentation (Amersham Biosciences, Little Chalfont, UK) as per the manufacturer’s instructions and cryopreserved in freezing media consisting of heat-inactivated fetal bovine serum (FBS, Thermo Fisher Scientific) containing 10% DMSO and stored in liquid nitrogen until use.
+ Open protocol
+ Expand
4

Differentiation of CD14+ Monocytes into Macrophages

Check if the same lab product or an alternative is used in the 5 most similar protocols
CD14+ monocytes were isolated from blood of human donors (approved by the local ethical committee, 2007–2019, with written consent obtained from each donor) by centrifugation through Ficoll-Paque (Amersham, GE Healthcare, Little Chalfont, UK), and subsequently suspended in 0.5% bovine serum albumin (BSA) and 2 mM EDTA in PBS, and were purified by using BD IMag™ Anti-Human CD14 Magnetic Particles - DM (BD Biosciences, CA) according to the supplier's instructions (Moller et al., 2017 (link)). CD14+ cells were seeded at a density of 66,667 cells/cm2 in T75 culture flasks (Greiner, InVitro, Fredensborg, Denmark) supplied with α minimum essential medium (αMEM; Invitrogen, Taastrup, Denmark) containing 10% fetal calf serum (FCS; Sigma-Aldrich, St Louis, MO) and 25 ng/ml human macrophage colony-stimulating factor (M-CSF; R&D Systems, Abingdon, UK) and cultured for 2 days at 37°C in 5% CO2 in a humidified atmosphere (Soe and Delaisse, 2010 (link)). Floating cells were harvested by centrifugation (500 g for 5 min) and returned to the respective flasks in fresh αMEM with 10% FCS, 25 ng/ml human M-CSF and 25 ng/ml human RANKL (also known as TNFSF11). The cells were cultured for an additional 7 days with medium changed twice.
+ Open protocol
+ Expand
5

Enriched PBMC Isolation and Differentiation

Check if the same lab product or an alternative is used in the 5 most similar protocols
PBMCs were harvested from patients enrolled in the clinical trial described previously using a COBE Spectra Apheresis System (COBE BCT Inc., Lakewood, CO). PBMCs from 3000 mL of blood were enriched by density gradient centrifugation with Ficoll-Paque (Amersham Pharmacia Biotech, Uppsala, Sweden). The PBMCs were incubated for 45 minutes in a 5% CO2 atmosphere at 37°C in serum-free AIM-V medium (Gibco, Paisley, Scotland). Plastic-adherent cells were used to generate DCs, whereas nonadherent cells were used to generate CTLs.
+ Open protocol
+ Expand
6

Enrichment and Isolation of T and NK Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
CD4 positive and CD8 positive T cells were negatively enriched from fresh leukopacks (American Red Cross, Columbus, OH) by 30-minute incubation with Rosette Sep CD4 T (or CD 8 T) cell enrichment cocktail (Stem Cell Technologies, Vancouver, BC), followed by Ficoll-Paque (Amersham Pharmacia Biotech, Uppsala, Sweden) density gradient centrifugation. CD4+ (or CD8+) cells were then isolated to purity by positive selection using EasySep Human CD4 (or CD 8) Positive Selection Kit (Miltenyi Biotec, Auburn, CA). Purity of isolated CD4+ and CD8+ cells were evaluated by flow cytometry using CD3 V450 and CD4 APC or CD8 APC, and purity was validated to be greater than 95 percent. NK cells were negatively enriched from fresh peripheral blood leukopacks (American Red Cross: Columbus, OH) by 30-minute incubation with RosetteSep cocktail (Stem Cell Technologies: Vancouver, BC) followed by density gradient centrifugation as previously described (18 (link)), and used immediately. Purity of the isolated NK cells was evaluated using CD56 APC and CD3 V450, and validated to be greater than 81 percent.
+ Open protocol
+ Expand
7

PBMC Isolation from Heparinized Blood

Check if the same lab product or an alternative is used in the 5 most similar protocols
Heparinized blood samples were collected from healthy volunteers and patients with acute disease. PBMCs were prepared by density centrifugation on Ficoll-Paque (Amersham Biosciences, Little Chalfont, UK) and re-suspended in complete medium.
+ Open protocol
+ Expand
8

Isolation and Culture of Human Hematopoietic Stem Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
K562 cells were cultured in RPMI supplemented with 10% FBS as described previously32 (link). Mononuclear cells were isolated from umbilical cord blood by Ficoll-Paque (Amersham Biosciences, Uppsala, Sweden) density gradient centrifugation after obtaining the donor’s consent according to governmental regulations (“Guidelines for collection and use of human specimens for research”, Ministry of Health and Welfare, Taiwan) approved by the Institutional Review Board of the Taoyuan General Hospital, Taiwan. The isolation and culture methods for hHSC were described previously17 (link). Briefly, human CD34+ hHSC were isolated from mononuclear cells by magnetic micro-bead isolating methods using Direct Progenitor Isolation Beads (Miltenyi Biotech, Bergisch Gladbach, Germany) and MACS LS-columns (Miltenyi Biotech). 2.5 × 105 hHSC cells were cultured in 5 ml of EDM (5 × 104  cells/ml) in the presence of SCF (50 ng/ml) and EPO (6 IU/ml) for 6 days.
+ Open protocol
+ Expand
9

Isolation and Characterization of Treg Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
PBMC were isolated by differential centrifugation over Ficoll-Paque (Amersham Pharmacia Biotech). CD4+ and CD14+ cells were isolated by positive immunomagnetic selection (MiltenyiBiotec), and were >95% CD4+ and CD14+, respectively, as measured by flow cytometry. CD4+ cells were cultured in 12-well plates at 2 ×106 cells/well in RPMI 1640 containing 10% heat-inactivated human serum, with 2 × 105 autologous CD14+ monocytes/well and γ-irradiated M. tb (10 µg/ml) at 37°C. After 4 days, CD4+CD25+ and CD4+CD25- cells were isolated, using the Treg isolation kit (MiltenyiBiotec), as described [11 (link)]. Eighty five-90% of isolated CD4+CD25+ cells expressed Foxp3, and <1% of CD4+CD25- cells were Foxp3+, as determined by intracellular staining.
+ Open protocol
+ Expand
10

Splenic B Cell Isolation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Spleens were obtained from post-mortal kidney donors (Erasmus MC Hospital, Rotterdam) and anonymously used for research purposes as described in article 13 of The Netherlands law of organ donation (Wet op Orgaandonatie, WOD). All samples and data were analyzed anonymously. Spleens were mechanically disrupted and filtered through a 70-µm cell strainer (Greiner Bio-one, Alphen a/d Rijn, The Netherlands) to obtain a single-cell suspension. Mononuclear cells, isolated using Ficoll-Paque (Amersham Pharmacia Biotech, Uppsala, Sweden) density gradient, were stored at −150°C until use. Upon thawing, quiescent B cells were isolated by negative selection using anti-CD43-magnetic beads (Miltenyi Biotec GmbH, Bergisch Gladbach, Germany) (23 (link)). Purity was determined by flow cytometry (FACS Canto II). Typically, cell suspensions consisted of >98% pure CD19+ B cells. B cells from spleens from 12 different donors were used it the experiments.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!