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45 protocols using nanoliter 2000

1

Retrograde Transduction of Dorsal Root Ganglia

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Nearly all of the sciatic DRG perikarya resided in the L4 and L5 DRGs.29 (link) AAV vector was microinjected into right L4 and L5 DRGs using previously described techniques.27 (link) In brief, the surgically exposed intervertebral foramen was minimally enlarged by removal of laminar bone. The injection was performed through a micropipette that was advanced approximately 100 µm into the ganglion. Rats received L4 and L5 DRG injections of either AAV6-TAD or AAV6-EGFP (one vector per rat), consisting of 2 µl with adjusted titers containing a total of 2.0 × 1010 GC particles. The injection was performed over a 5 min period using a Nanoliter 2000 microprocessor-controlled injector (World Precision Instruments, Sarasota, FL). Removal of the pipette was delayed for an additional 5 min to minimize extrusion of the injectate. Following the injection and closure of overlying muscle and skin, the animals were returned to the animal house where they remained for the experimental times. We have previously shown that AAV6 administered in this fashion produce transduction limited to the neurons of the injected DRGs, without significant glial transduction, likely due to high purity of vectors.18 (link),26 (link)
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2

Stereotaxic Viral Vector Injections in Mice

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Stereotaxic injections were performed on 8to 9-week-old mice. The animals were anaesthetized with a mixture of ketamine (100 mg/kg) and xylazine (10 mg/kg) via intraperitoneal injection and secured in a stereotaxic apparatus. For stereotaxic injection, glass micropipettes and the Nanoliter 2000 (World Precision Instrument, USA) were used to inject the virus. The following stereotaxic coordinates were used (in mm; relative to bregma): for behavioral studies, AAV-DIOhM3Dq, AAV-DIO-EYFP, AAV-hM3Dq, and AAV-tdTomato were bilaterally injected (AP +1.1, ML ±1.1, DV –3.25); for measurement of the bridging collateral with haloperidol injection, AAV-FLEX-tdTomato was injected at two sites (site A: AP +1.3, ML ±1.4, DV –3.2; site B: AP +0.8, ML ±2.0, DV –3.4); for the measurements of the bridging collateral with CNO injection, a viral mixture of AAV-DIO-EYFP and AAVhM3D (1:1(v/v)) was bilaterally injected (AP +1.1, ML ±1.1, DV –3.25). The injection rate for all AAV vectors was 23.0 nl/sec/injection (10 injections total with a 20-s interval). The glass pipette was left in place for 10 min after the final injection and then slowly withdrawn.
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3

Insect Immune Pathway Activation by CP-His

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Recombinantly expressed and purified CP-His was micro-injected into the hemolymph of non-viruliferous fourth instars in the ventral thorax using Nanoliter 2000 (World Precision Instruments). For each insect from the treatment group, 23 nL of CP-His at 330 μg/mL was injected. An equal volume of the expression and purified products from the pET28a vector was injected into the insects from the control group. Activation of JNK, accumulation of TNF-α, and GPS2 transcript levels were checked at 24 hr after CP-His administration. Three to six biological replicates and eight insects per replicate were used.
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4

Ubc13 Regulation of Insect Immunity

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Non-viruliferous fourth instar planthoppers were injected with 23 nL of dsRNA of Ubc13 at 6 μg/μL and with 23 nL of 50 μM mouse TNF-α (Sigma-Aldrich, Santa Clara, CA, USA) using Nanoliter 2000 (World Precision Instruments). The insects from the control group were injected with 23 nL of dsRNA of GFP at 6 μg/μL and 23 nL of 20 mM Tris-HCl containing 0.1% Tween 20. Ubc13 transcript levels and activation of JNK were checked after 3 d of treatment. At least three biological replicates and eight insects per replicate were used.
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5

Targeted Gene Silencing by RNAi Delivery

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PCR primers with T7 promoter sequences, gps2-dsRNA-F/gps2-dsRNA-R, jnk1-dsRNA-F/jnk1-dsRNA-R, jnk2-dsRNA-F/jnk2-dsRNA-R, ubc13-dsRNA-F/ubc13-dsRNA-R, or TNF-α-dsRNA-F/ TNF-α-dsRNA-R were used to prepare 219-bp double-stranded RNA (dsRNA) of GPS2, 124-bp dsRNA of JNK1, 167-bp dsRNA of JNK2, 142-bp dsRNA of Ubc13, or 107-bp dsRNA of TNF-α (Supplementary file 1). A 420-bp dsRNA for green fluorescent protein (GFP) was amplified using primers gfp-dsRNA-F and gfp-dsRNA-R as negative controls (Supplementary file 1). dsRNA was generated using the T7 RiboMAX Express RNAi System (Promega, Madison, Wisconsin, USA) and purified using Wizard SV Gel and the PCR Clean-Up System (Promega) following the manufacturers’ protocols. Injection of 23 nL of dsRNAs at 6 μg/μL was performed on the fourth instar nymphs. The dsRNAs were delivered into hemolymph in the ventral thorax by microinjection through a glass needle using Nanoliter 2000 (World Precision Instruments, Sarasota, Florida, USA).
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6

Tracing Descending Tectotegmental Pathway

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Two adult animals were deeply anesthetized by an intramuscular injection of a 3:1 mixture of Ketamine (50 mg/kg, Inresa Arzneimittel GmbH, Freiburg, Germany) and Rompun (20 mg/kg Xylazin, Bayer, Leverkusen, Germany) and were placed in a modified head holder on a stereotaxic frame (Karten and Hodos, 1967 ). Under additional local anesthesia, the skin was incised above the skull, the trabecular bone above the optic tectum was opened, and the descending tecto-tegmental tract at the level of the reticular formation underneath the inferior colliculus was identified using stereotaxic coordinates (Kuenzel and Masson, 1988 ). A micropipette filled with 7.5% (w/v) biotinylated dextran-amine (BDA; MW 3,000; Invitrogen Germany) in phosphate buffer (PB; 0.1 M, pH 7.4) was inserted into the desired location and about 300 nl were injected using a pressure device (Nanoliter 2000, World Precision Instruments, Sarasota, FL, USA). Animals received post-operative treatment and survived for 5–7 days before being sacrificed with an overdose of anesthetics, and subsequent transcardial perfusion with 0.9% normal saline followed by an ice-cold solution of 4% paraformaldehyde (PFA) in PB. Brains were extracted and fixed in 4% PFA in PB for a minimum of 24 h.
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7

AAV-Mediated Overexpression of Ppargc1α in APP/PS1 Mice

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APP/PS1 mice were anesthetized with xylazine/ketamine (11.6/73 mg/kg, i.p) and placed in a stereotaxic frame (RWD Life Science) with a mouse adapter. The tip of a pulled glass pipette was inserted at stereotaxic coordinates for AP −1.94 mm, for ML- ±1.5 mm and for DV- −1.0 mm, relative to the bregma, according to our previously report [10 (link),15 (link)]. Viral Vector suspension in a volume of 0.5 μL of PBS buffer was microinjected into the bilateral lateral parietal association (LPtA) cortex of APP/PS1 genotype mice using 2 μL bursts from a Nanoliter 2000 injector (World Precision Instruments). This corresponded to 2 × 1012 viral genome copies (vgc) of pAAV-MCS-Ppargc1α-m-FLAG-HA and 1 × 1012 vgc of pAAV-MCS-FLAG-control; expression plasmid was provided by Applied Biological Material co (abm, Zhenjiang, China). It was reported that AAV-mediated transgenic protein expression peaked after three weeks and remains at stable levels after infusion [16 (link),17 (link)]. Accordingly, all behavioral tests and the subsequent molecular examinations were performed three weeks later after mice were infused with AAV. Virus expression was corroborated by immunofluorescence and western blot.
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8

Microinjection of Saliva Exosomes into Rice Leaves

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Saliva exosomes were microinjected into the midribs of healthy 4-wk-old rice leaves through a glass needle using a Nanoliter 2000 microinjector (World Precision Instruments). Each leaf was microinjected five times with 23 nL each time at an interval of 1 cm. The leaves were collected at 3, 6, and 9 dpi for RSV NP measurement with qPCR. One leaf per replicate and 13 to 20 biological replicates were prepared. Disease symptoms were observed after 4 wk of inoculation. RSV crude extracts from viruliferous planthoppers were prepared as described previously (19 (link)) and used as positive control.
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9

Targeted AAV Delivery to DRG Neurons

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AAV vectors were microinjected into right lumbar (L) 4 and L5 DRGs of isoflurane-anesthetized rats, performed through a micropipette using previously described techniques (Fischer et al., 2011 (link)). Briefly, the surgically exposed intervertebral foramen was minimally enlarged by removal of laminar bone. Injection was performed through a micropipette that was advanced ~100 µm into the ganglion. Rats received L4 and L5 DRG injections of vectors (one vector per rat), consisting of 2 µl with adjusted titers containing a total of 2.0×1010 genome containing viral particles. For dual AAV vector injection, 1 µl of AAV6-GFAP-EGFP was mixed with 1 µl of AAV6-CMV-mCherry. Injection was performed over a 5-min period using a Nanoliter 2000 microprocessor-controlled injector (World Precision Instruments, Sarasota, FL, USA). Removal of the pipette was delayed for an additional 5 min to minimize the extrusion of the injectate. Following the injection and closure of overlying muscle and skin, the animals were returned to the animal house where they remained for 5 weeks. In other animals, sham injection was performed, with exposure of the DRGs but no injection.
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10

Targeted DRG Gene Delivery via AAV Vectors

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AAV vector solution was microinjected into the right lumbar (L) 4 and L5 DRG using previously described techniques [22 (link)]. Briefly, the surgically exposed intervertebral foramen was slightly enlarged by the removal of laminar bone. Injection was performed through a micropipette that was advanced ~ 100 μm into the ganglion. Rats received L4 and L5 DRG injections of either AAV6-3.2iPA or AAV6-3.2NP (one vector per rat), consisting of 2 μl with adjusted titers containing a total of 2.0 × 1010 genome viral particles for each DRG. Injection was performed over a 5-min period using a microprocessor-controlled injector (Nanoliter 2000, World Precision Instruments, Sarasota, FL, USA). Removal of the pipette was delayed for an additional 5 min to minimize the extrusion of the injectate. Following the injection and closure of overlying muscle and skin, the animals were returned to their housing where they remained as the designed experiments required.
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