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Rabbit anti sox2

Manufactured by Cell Signaling Technology
Sourced in United States

The Rabbit anti-Sox2 is a primary antibody that recognizes the transcription factor Sox2. Sox2 is a key regulator of embryonic stem cell pluripotency and plays a crucial role in the maintenance of stem cell identity. This antibody can be used to detect and study the expression and localization of Sox2 in various cell and tissue types.

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26 protocols using rabbit anti sox2

1

Immunocytochemical Analysis of Neural Stem Cells

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Seeded NSCs were washed with PBS and fixed with ice-cold 4% paraformaldehyde for 15 min at room temperature. The cells were then permeabilized with 0.5% Triton X-100 in TBS for 5 min and blocked with 2% FBS in TBS for 30 min at room temperature. The cells were incubated with primary antibodies: rabbit anti-sox2 (1:200, cell signaling, CA, USA), mouse anti-nestin (1:200, Millipore, MA, USA), rabbit anti-MAP2 (1:200, Millipore, MA, USA), mouse anti-β-tubulin III (1:200, Millipore, MA, USA), rabbit anti-GFAP (1:200, Stem Cell Technologies, BC, CA), rabbit anti-phosphorylated IRF3 (Ser396) (1:200, cell signaling, CA, USA), or mouse anti-ZIKV E protein (1:500, GeneTex, CA, USA) at 4 °C overnight. The cells were then washed three times with TBS and incubated with Dylight 594-conjugated donkey anti-mouse secondary antibody or Dylight 488-conjugated goat anti-rabbit secondary antibody (1:1000, Jackson ImmunoResearch Laboratories, PA, USA) for 1 h at room temperature. The cells were then washed three times with TBS, and the cell nuclei were counterstained with DAPI (4′,6-diamidino-2-phenylindole) (Sigma-Aldrich, MO, USA). The images were collected with a fluorescence microscope (Olympus BX51, Olympus, Tokyo, JP).
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2

Western Blot Analysis of Cellular Proteins

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Cell samples were lysed in a buffer containing 150 mM NaCl, 10 mM HEPES, 2 mM MgCl2, 10 mM KCl, 0,5 mM EDTA and 0.5% Triton X-100. Protease inhibitors were added freshly. The Protein concentration was measured using the Pierce BCA Protein Assay Kit (Thermo Fisher) and equal amounts of protein were separated by electrophoresis on SDS/PAGE and blotted onto cellulose membranes (BioTrace NT, Pall). Membranes were blocked with 3% BSA in TBST and then incubated with the primary antibody over night at 4 °C (i.e. sheep anti-Trim71 (R&D Systems) rabbit anti-Ago2 (Cell Signaling) rabbit anti-TuJ1 (Cell Signaling), rabbit anti-Sox2 (Cell Signaling), mouse anti-Tubulin (Sigma).
After washing with TBST, followed by incubation with HRP-conjugated secondary antibodies (Jackson ImmunoResearch), bands were detected by chemiluminescence (Thermo Scientific).
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3

Protein Expression Analysis in Cultured Cells

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The cultured cells were washed with cold PBS and then treated with cell lysis buffer (2× loading buffer, 2 μg·mL−1 Aprotinin, 1 mm PMSF, 2 mm β‐mercaptoethanol) at 100 °C for 10 min. Then the mixture was centrifuged under 4 °C at 14000g for 10 min. Approximately 10 μL of protein was loaded in each lane of 10% SDS/PAGE gel and separated, and the protein then transferred to a PVDF membrane. The membrane was blocked with 5% BSA for 1 h at room temperature and then incubated with primary antibodies at 4 °C overnight, followed by the secondary antibody. The antibodies used were rabbit anti‐CD133 (Cell Signaling Technology, Danvers, MA, USA; #64326), rabbit anti‐OCT4 (Cell Signaling Technology; #2750), rabbit anti‐SOX2 (Cell Signaling Technology; #3579), rabbit anti‐NANOG (Cell Signaling Technology; #4903), mouse anti‐KRAS (Santa Cruz Biotechnology, Dallas, TX, USA; sc30), mouse anti‐β‐Tubulin (Cell Signaling Technology; #6181), rabbit anti‐TET3 (Cell Signaling Technology; #85016), rabbit anti‐Lin28B (Signalway Antibody LLC, College Park, MD, USA;#21626), rabbit anti‐PKCβ (Cell Signaling Technology; #46809), rabbit anti‐PKCδ (Cell Signaling Technology; #2058), rabbit anti‐PKCζ (Cell Signaling Technology; #9372), rabbit anti‐PKCμ (Cell Signaling Technology; #2056) and mouse anti‐Flag (Sigma; CAT F1804).
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4

Immunodetection of Neuronal Markers

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Immunodetection of neuronal markers was carried out as previously described [53 (link), 54 (link)]. Primary antibodies used were: rabbit anti-doublecortin (Cell Signaling Technology Inc.), monoclonal anti-NeuN (Millipore), goat anti-FZD1 (R&D Systems), goat anti-FZD1 (LifeSpan Biosciences, Inc.), rabbit anti-SOX2 (Cell Signaling Technology Inc.), monoclonal anti-GFAP (Sigma-Aldrich), monoclonal anti-Nestin (Millipore), rabbit anti-Ki67 (Abcam). As secondary antibodies, Alexa (Molecular Probes) and DyLight (Abcam) conjugated antibodies were used. NucBlue (Life Technologies) was used as nuclear dye. Slices were mounted on gelatin-coated slides with Fluoromont-G (Electron Microscopy Sciences). Double-labeled sections were analyzed by confocal laser microscopy (Olympus FV 1000). Image analysis and z-projections were made with ImageJ software (NIH, USA).
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5

Multimodal Immunohistochemistry Assay

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Immunohistochemistry was performed on free-floating sections. When antigen retrieval was necessary, tissues were treated for 45 minutes in citrate buffer (pH 6) at 80°C. To block unspecific staining when mouse-raised primary antibodies were used, we initially incubated sections with goat anti-mouse and goat anti-rabbit IgG (Jackson ImmunoResearch) 1:50 in 0.1 M PB 0.4% Triton-X (PBTx). After a permeabilization and blocking incubation for 2 hours at RT in PBTx supplemented with 10% heat-inactivated GS, the sections were incubated with the primary antibodies for 12 hours at 4°C in PBTx, 2% GS. Incubation with secondary antibodies was performed for 2 hours at 4°C in PBTx, 2% GS. Nuclear counterstaining was achieved with DAPI (0.5 μg/mL). The following primary antibodies and dilutions were used: mouse anti–Ki67 (1:100, Dako), rabbit anti-RFP (1:100, Abcam), rabbit anti-Sox2 (Cell Signaling, 1:100). For blood vessel staining, sections were incubated with DyLight-488 Tomato Lectin (Vector Lab) for 1hr RT at 1:1000. Coverslips were mounted using Pro-long Gold (Vector Lab).
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6

Immunolabeling of Neural Stem Cells

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For this study, the following antibodies were purchased: mouse anti-BrdU (RRID:AB_10015222; BD Biosciences, San Jose, CA, USA, #555,627), rabbit anti-Sox2 (RRID:AB_823640; Cell Signaling Technology, Danvers, MA, USA, #2748S), rabbit anti-p21 (RRID:AB_823586; Cell Signaling Technology, #2947S), mouse anti-Nestin (RRID:AB_396354; BD Biosciences, #556,309), rabbit anti-GFAP antibody (RRID:AB_10013382; Agilent Dako, Santa Clara, CA, USA, #z-0334), mouse anti-DCX (RRID:AB_10610966; Santa Cruz Biotechnology, CA, USA, #sc271390), rabbit anti-TH (RRID:AB_390204; Millipore, St. Louis, MO, USA, #AB152), rabbit anti-CR (Synaptic Systems GmbH, Göttingen, Germany, #214 102), rabbit anti-actin (RRID:AB_476693; Sigma, St. Louis, MO, USA, #A2066), Alexa Fluor 488-conjugated goat anti-mouse immunoglobulin G (IgG) (RRID: AB_2536161; Invitrogen, #A28175), Alexa Fluor 488-conjugated goat anti-rabbit IgG (RRID:AB_143165; Invitrogen, #A11008), Alexa Fluor 568-conjugated goat anti-rabbit IgG (RRID:AB_143157; Invitrogen, #A11011), Alexa Fluor 647-conjugated goat anti-rabbit IgG (RRID:AB_2536101; Invitrogen, #A27040), Alexa Fluor 488-conjugated donkey anti-rabbit IgG (RRID:AB_2556546; Invitrogen, #R37118), Alexa Fluor 488-conjugated donkey anti-mouse IgG (RRID: AB_2556542; Invitrogen, #R37114) antibodies, and Alexa Fluor 594-conjugated cholera toxin subunit B (CtxB; Invitrogen, #C34777).
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7

Multiplex Immunostaining Protocol for Neural Lineage Analysis

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Mouse anti-BCAS1 (Santa Cruz, 1:500, ICC and IHC, RRID: AB_10839529), mouse anti-βIII (BioLegend, 1:1000, ICC, RRID:AB_10063408), rabbit anti-βIII (BioLegend, 1:2000, RRID: AB_2564645), sheep anti-BrdU (Abcam, 1:1000, ICC, RRID:AB_302659), rabbit anti-CC3 (Millipore, 1:500, ICC, RRID: AB_91556), rabbit anti-GFAP (Dako, 1:1000, ICC, RRID: AB_10013382), rat anti-GFAP (Thermo Fisher, 1;1000, RRID:AB_2532994), chicken anti-eGFP (Abcam, 1:1000, IHC, RRID: AB_300798), mouse anti-Ki67 (BD Pharmingen, 1:300, ICC, RRID: AB_396287), rat anti-MBP (a. a. 82-87) (Millipore, 1:500, ICC, RRID: AB_94975), goat anti-PDGFRα (R&D Systems, 1:400 for IHC, 1:300 for ICC, RRID: AB_2236897), rabbit anti-PDGFRa (Santa Cruz, 1:300 for IHC, RRID: AB_631064), rabbit anti-PLP (Abcam, 1:500, ICC, RRID: AB_776593), rabbit anti-SOX2 (Cell Signalling, 1:2000, ICC, RRID: AB_2194037), goat anti-SOX2 (R&D Systems, 1:1000, IHC, RRID: AB_355110). Fluorescently labeled highly cross-absorbed secondary antibodies were purchased from Jackson ImmunoResearch and used at 1:1000 dilution. If MOM kit was used, Cy3-, DTAF-, or Cy5 conjugated streptavidin (Jackson ImmunoResearch) were used at 1:1000 dilution.
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8

Pluripotency Marker Analysis in mESCs

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For pluripotency marker analysis, mESCs were grown on microscope slides precoated with fibronectin, containing MEF feeders. mESCs were fixed with 4% PFA for 20 min, washed in 1% BSA, and incubated overnight with primary antibody at 4 °C. The primary antibody used in this study include mouse anti-phospho-Histone H2A.X (Ser139) (Millpore, Cat# 05–636, 1:100 dilution); mouse anti-O-linked N-acetylglucosamine (O-GlcNAc) (HGAC85) (Thermo Fisher Scientific, Cat# MA1–076, 1:50 dilution); rabbit phospho-ATM/ ATR Substrate Motif [(pS/pT) QG] (Cell signaling, Cat# 6966S, 1:100 dilution); mouse anti-O-GlcNAc transferase (C-10) (Santa Cruz Biotechnology, Cat# sc-376253, 1:100 dilution); rabbit anti-SOX2 (Cell signaling, Cat# 9656S, StemLight Pluripotency Antibody Kit, 1:50 dilution); and rabbit anti-TRA-1–60(S) (Cell signaling, Cat# 9656S, 1:50 dilution). The samples were then incubated for 2 h with secondary antibodies at 25 °C, washed in PBST, mounted with Vectashield and analyzed using a Zeiss LSM 700 system.
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9

Immunohistochemical Analysis of Hippocampal Tissue

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Fresh frozen hippocampal tissue blocks were removed from storage at −80 °C, embedded in O.C.T. compound (Tissue-Tek; Tokyo, Japan) and sectioned at 10 μm onto Superfrost/Plus slides (Fisherbrand; Fisher Scientific, U.S.A.). Prepared slides were stored at −80 °C until use. Slides were removed from −80 °C and fixed in 4% paraformaldehyde in 0.1 M PBS, pH 7.4 for 15 minutes at room temperature, permeabilized with 5% normal goat serum (NGS)/0.3% Triton X-100/0.05% Tween-20, and incubated with primary antibodies diluted in PBS containing 1.5% NGS overnight at room temperature. Primary antibodies used were rabbit anti-SOX2 (1:200; Cell Signaling, Danvers, MA) and mouse anti-NeuN (1:1000; Millipore, Billerica, MA). Slides were washed in PBS before incubation with Alexa-conjugated secondary antibodies (donkey-anti rabbit and donkey anti-goat; 1:400; Life Technologies, USA) in PBS containing 1.5% NGS for 1 hour at room temperature. Finally, slides were washed in PBS, treated with 0.3% Sudan Black B (in 70% EtOH), washed again, and coverslipped using Vectashield mounting medium containing DAPI (Vector Laboratories, Burlingame, CA, US).
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10

Protein Expression Analysis in Stem Cells

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Total proteins were extracted from the REFs and RiPSCs-6F/CR using the total protein extraction kit (cat. no. P0028; Beyotime Institute of Biotechnology) and quantified using a BCA protein assay kit (cat. no. P0010; Beyotime Institute of Biotechnology). Equivalent quantities of protein (40 µg/sample) were separated by SDS-PAGE on 10% gels and electroblotted onto PVDF membranes (0.45 µM; MilliporeSigma). The membranes were blocked with 5% skimmed milk powder diluted in TBS-0.05% Tween at room temperature for 1 h and immunoblotted overnight at 4°C with the following primary antibodies: Rabbit anti-OCT4 (1:200; Abcam), rabbit anti-Nanog (1:300), rabbit anti-Sox2 (1:500; both from Cell Signaling Technology, Inc.) and mouse anti-β-actin (1:1,000; Affinity Biosciences). Subsequently, the membranes were incubated with a HRP-labeled secondary antibody (1:5,000; cat. no. 111-035-003; Jackson ImmunoResearch Laboratories, Inc.) for 1 h at room temperature. The protein bands were then visualized using Clarity Western ECL Substrate (Bio-Rad Laboratories, Inc.) and were semi-quantified using Quantity One software version 1-D (Bio-Rad Laboratories, Inc.).
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