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Anti arl13b antibody

Manufactured by Proteintech
Sourced in United States

The Anti-Arl13b antibody is a research-grade antibody designed to detect the Arl13b protein. Arl13b is a small GTPase that plays a role in the structure and function of primary cilia. This antibody can be used to study the expression and localization of Arl13b in various cell and tissue types.

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4 protocols using anti arl13b antibody

1

Quantifying Cilia Frequency and Length

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Cells were cultured on round coverslips in 6-well plates, as previously described [7 (link)]. Briefly, cells were washed with PBS and fixed with 4% paraformaldehyde. Later, cells were permeabilized with PBS 0.1% Triton X-100 at room temperature and blocked with 5% bovine serum albumin and 10% BSA-PBS.
Cells were incubated with an anti-Arl13b antibody (Proteintech. Rosemont, IL, USA. Cat# 17711-1-AP, RRID:AB_2060867) overnight at 4 °C. Then, slides were incubated for 1 h with an Alexa Fluor 568 labeled goat anti-mouse IgG antibody (Thermo Fisher Scientific. Waltham, MA, USA. Cat# A-11031, RRID: AB_144696). Finally, cell nuclei were counterstained with 4′,6-diamidino-2-phenylindole (DAPI) and analyzed in a Leica Sp5 confocal microscope (Leica Biosystems. Wetzlar, Germany).
The frequency of cilia was estimated manually by analyzing Z-stacked images captured in a confocal microscope. The frequency of ciliated cells was estimated by analyzing the relative number of PC vs. the number of nuclei. A total of 1307 nuclei in non-stimulated cells and 1372 nuclei in stimulated cells were analyzed. The PC length was measured using the ROI measurement tool of ImageJ 1.52i software (National Institutes of Health. Bethesda, MD, USA) for a total of 576 cilia in non-stimulated and 302 in stimulated cells.
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2

Evaluating Conditioned Media Effects on Cell Viability

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To assess the effects of different conditioned media on cell viability, each experimental group was plated in 96-well cell culture plates (8–12 wells per group with 10,000 cells re-suspended in 100 µl of the indicated conditioned media in each well). After 7 days, cell viability was assessed using the 3-(4,5-dimethylthiazole-yl)-2, 5-diphenyl tetrazolium bromide (MTT) (cat # M2128; Sigma) assay as previously described [12 (link), 61 (link)]. The amount of viable cells was determined through optical density measurements (by measuring absorbance at 570 nm using an iMark™ Microplate Absorbance Reader). Experiments using ARL13B blocking peptide were prepared in sterile PBS according to the manufacturer’s instructions (cat # 33R-8244; Fitzgerald Industries International). Experiments using conditioned media pre-incubated with anti-Arl13b antibody (cat # 17711-1-AP; lot # 00017960; Proteintech) was prepared by diluting the antibody 1:1000 [0.041 μg/μl].
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3

Immunostaining of Ciliary Organelles

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NHEMs, Melan-a, and B16F1 cells cultured on Lab-Tek glass chamber slides (Thermo Scientific, Waltham, MA) were washed with cold PBS, fixed for 20 min with 4% (w/v) paraformaldehyde, washed twice with PBS, and incubated in PBS containing 0.1% (v/v) Triton X-100 (PBS-T) for 3 min. The cells were further washed 3 times with PBS-T and then incubated with anti-polyglutamylated-tubulin antibody (1:100 dilution, Adipogene, AG-20B-0020), anti-acetylated-tubulin antibody (1:1000 dilution, Sigma-Aldrich), and anti-ARL13B antibody (1:200 dilution, Proteintech) diluted in PBS-T containing 5% (v/v) normal goat serum for 1 h at room temperature. After washing with PBS, the cells were incubated with appropriate conjugated secondary antibodies and then mounted on glass slides to observe fluorescence using a confocal laser scanning microscope (model LSM510; Carl Zeiss Microimaging Inc., Thornwood, NY).
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4

Imaging Primary Cilia in IMCD3 Cells

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IMCD3 stables expressing GFP fusion proteins were plated on poly-L-lysine-coated coverslips and cilia induced by 48 hr of serum starvation. Cells were washed in PBS and fixed with 4% formaldehyde for 20 min (AcTub) or 2% formaldehyde and 50% ice-cold methanol for 15 min at 4°C (γ-Tub). Cells were permeabilized with 0.3% Triton X-100 in cytoskeletal buffer for 10 min. Cells were rinsed in 0.1% Tween 20 in PBS and blocked in 10% FBS in PBS for 30 min. For immunostaining of primary cilia, mouse 611B1 anti-acetylated α-tubulin antibody (1:5000; Sigma-Aldrich) or anti-Arl13B antibody (1:1000; Proteintech); and for basal body staining anti-γ-tubulin antibody (clone GTU-88, 1:1500; Sigma-Aldrich) and Arl3 staining anti-Arl3 antibody (1:500; Novus Biologicals) in 10% FBS in PBS were incubated overnight at 4°C. Alexa Fluor 647 or 405 anti-mouse or Alexa Fluor 647 anti-rabbit antibody (1:800; Life Technologies) was added for 45 min at room temperature. Coverslips were rinsed three times in 0.1% Tween 20 in PBS and once in PBS. Nuclei were stained with DAPI (Serva) diluted 1:10,000 in PBS for 1 min. Coverslips were fixed on glass slides with Mowiol (Merck). Images were taken using an Olympus IX81 microscope with a CCD camera and a 60× NA 1.35 objective. In all cases at least three independent staining experiments were carried out, and 100 cells were used for analysis.
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