The largest database of trusted experimental protocols

40 protocols using a438079

1

Investigating Macrophage Inflammatory Responses

Check if the same lab product or an alternative is used in the 5 most similar protocols
Key reagents and their sources were as follows: Escherichia coli LPS serotype 055:B5, TNF-α protease inhibitor-0 (TAPI-0) and ATP were from Sigma-Aldrich; selective p38 inhibitor (SB202190) was from Calbiochem Merck-Millipore; P2X7 receptor selective antagonists AZ10606120, A438079, and A740003 were from Tocris. The composition of the physiological buffer used in all experiments to stimulate macrophages with ATP was (in millimoles): 147 NaCl, 10 HEPES, 13 d-glucose, 2 KCl, 2 CaCl2, and 1 MgCl2; pH 7.4.
HEK293T cells (ATCC CRL-11268) were cultured in DMEM:F-12 media (1:1; Lonza) supplemented with 10% of fetal calf serum (Life Technologies) and 2 mM Glutamax (Life Technologies) and were routinely tested for mycoplasma contamination with a Mycoplasma Detection Kit (Roche). Lipofectamine 2000 (Life Technologies) was used according to the manufacturer’s instructions to transfect a plasmid coding for human TNF-α into HEK293T cells.
+ Open protocol
+ Expand
2

P2X7 Antagonists: Preparation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The P2X7 antagonists A-438079, A-839977, and AZ-10606120 were from Tocris Bioscience. Unless otherwise stated, all other chemicals were from Sigma-Aldrich. Stock solutions of drugs were prepared in standard or low-DIC bath solutions (ATP disodium salt, TNP-ATP [2′,3′-O-(2,4,6-trinitrophenyl) adenosine 5′-triphosphate] sodium salt), distilled water (BBG [Coomassie brilliant blue G-250], suramin), or DMSO (A-438079, A-839977, AZ-10606120, amiloride, NS-8593). Aliquots of stock solutions were stored at −20°C, and freshly diluted at the day of the experiment. The DMSO concentration in bath solutions never exceeded 0.1%, a concentration that had no effects on ATP-induced currents, Ca2+ entry signals, and Yo-Pro-1 uptake responses in HEKhP2X7 cells. ATP stock solutions were routinely readjusted to pH 7.3 with NaOH.
+ Open protocol
+ Expand
3

Tracing and Manipulating Optic Nerve Injury

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tracing from the superior colliculi: hydroxystilbamidinemethanesulfonate (OHSt, Molecular Probes, Leiden, The Netherland) diluted at 10% was applied to both superior colliculi one week before surgery or processing (intact animals), as previously described4 (link)6 (link).
Unilateral optic nerve crush: the left ON was crushed at 1 mm from the optic disk using previously reported methods4 (link)6 (link). Animals were sacrificed at increasing times post-lesion. Both retinas were analyzed, injured and contralateral to the lesion ones. Retinas from naive (intact) animals were used as control.
Intravitreal injection was carried out following previously described methods4 (link). The left eye was injected with the P2X7 receptor selective antagonist A438079 ((3-(5-(2,3-dichlorophenyl)-1H-tetrazol-1-yl)methyl pyridine; Tocris, Bristol, United Kingdom) at a concentration of 300 ng/eye, dissolved in PBS. This dose was chosen based on previous reports78 (link). The antagonist was administered to intact retinas to assess its toxicity, and to injured retinas from wild type animals right after performing ONC. The same volume of vehicle (2.5 μl) was administered in ONC-injured animals as control.
The number of retinas and the performed analyses are detailed in Table 5.
+ Open protocol
+ Expand
4

Pharmacological Modulation of Duchenne Muscular Dystrophy

Check if the same lab product or an alternative is used in the 5 most similar protocols
Starting at 2 wk of age, mdx mice were treated daily by intraperitoneal injection for 4 wk with 125 mg/kg body weight Coomassie Brilliant Blue G 250 (CBB) (Sigma-Aldrich) or for 4 wk with 8.4 mg/kg body weight oxidized ATP (ox-ATP) (Tocris Bioscience) or for 2 wk with 50 mg/kg body weight A-438079 (Tocris Bioscience). Dosage was based on previous studies [9 (link),23 (link),24 (link)]. Age-matched control mice received the same volume of sterile saline (for CBB and ox-ATP) or saline with 20% v/v DMSO solution (for A-438079).
+ Open protocol
+ Expand
5

Inhibition of GPVI Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Each inhibitor was added 20 min before stimulation with LL-37 or CRAMP. BAPTA (inhibitor of intracellular calcium release); U-73122 (phospholipase C inhibitor); GF109203X (Protein kinase C inhibitor); SB203580 (p38-MAPK inhibitor), MG101 (calpain inhibitor); wortmannin (phosphoinositide 3-kinase inhibitor); Boc-MLF (FPR1-receptor inhibitor); WRW4 (FPR2-receptor inhibitor); and A438079 (P2X7 receptor inhibitor) were all obtained from Tocris (Bristol, UK). Pertussis toxin and cholera toxin (inhibitors of G-protein signaling) and Tirofiban (GPIIb/IIIa inhibitor) were from Sigma. Abciximab was from Elly Lilly (USA). Dasatinib (inhibitor of Src-family kinases), R406 (Syk Inhibitor), and Stattic (STAT3-Inhibitor) were from Selleckchem (Houston, USA). Anti-mouse GPVI antibody was from Emfret (clone JAQ1, Cat No. M011-0). The inhibitory monoclonal antibody HGP5C4 directed against human GPVI and the respective isotype control antibody RmC7H8 were generated by immunization of Lou/C rats with an adenovirally expressed human GPVI-Fc fusion protein. The latter represents a soluble form of GPVI with the extracellular domain of human GPVI fused to the human Fc domain. 4C9 and 5C4 monoclonal antibodies (immunoglobulin G1 subtype) specifically bound to GPVI-Fc but not control Fc65 (link). RmC7H8, raised in rats against an irrelevant human antigen, served as control monoclonal antibody (mAb).
+ Open protocol
+ Expand
6

Spinal Cord Injury Mouse Model

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mice were anesthetized with ketamine (75 mg/kg) and xylazine (3 mg/kg) intraperitoneally and the muscles overlying the T5 to T8 vertebrae were dissected, followed by laminectomy to expose the spinal cord. To induce SCI, extradural compression of the spinal cord at the level of the T6-T7 vertebra was conducted via placement of an aneurysm clip with a closing force for 1 min, as described by Paterniti et al. [17 (link)]. The aneurysm clip is with a closing force of 30 g based on previous study [18 (link)]. Mice undergoing laminectomy alone served as the sham group.
Mice in treatment groups received a daily single-dose intraperitoneal injection of BAY 11-7082 (Tocris Bioscience, Bristol, UK) at 20 mg/kg or A438079 (Tocris Bioscience) at 80 mg/kg in 0.1 ml vehicle (DMSO and 0.9% NaCl, 1:3) immediately after injury and following 2 days. Sham and SCI groups received daily 0.1 ml vehicle immediately post injury and following 2 days intraperitoneally. Mice underwent manual bladder expression twice a day until recovery of reflex bladder emptying. The timing and dose of BAY 11-7082 [19 (link), 20 (link)] and A438079 [21 (link)] were based on previous studies.
+ Open protocol
+ Expand
7

Opioid and Purinergic Receptor Antagonists

Check if the same lab product or an alternative is used in the 5 most similar protocols
Morphine was gifted from the National Institute on Drug Abuse Drug Supply Program (NDSP) Division of Therapeutics and Medical Consequences, Research Triangle Institute, NC. The Toll-like receptor 4 (TLR4) antagonist (+)-Naloxone was synthesized by Dr. Kenner Rice (National Institute on Drug Abuse/National Institute on Alcohol Abuse and Alcoholism, Bethesda) for use in these studies. The P2X7 antagonist A438079 was obtained commercially (Tocris Bioscience). Endotoxin-free physiological saline (Hospira Inc.) was the vehicle for each.
+ Open protocol
+ Expand
8

Pharmacological Interventions in Ischemic Stroke

Check if the same lab product or an alternative is used in the 5 most similar protocols
A438079 (P2X7 antagonist), Go6983 (PKC inhibitor), or BAPTA (intracellular Ca2+ chelator) was purchased from Tocris Bioscience (Bristol, UK). ATP, BzATP, Phorbol 12-myristate 13-acetate (PMA, PKC activator), apocynin (NADPH oxidase inhibitor), Trolox (ROS scavenger), or apyrase were purchased from Sigma Aldrich (St. Louis, MO, USA). ATP (5~50 mg/kg), BzATP (5 mg/kg), apyrase (0.2 U/kg) were administered intravenously in 0.3 mL PBS, and apocynin (2.5 mg/kg) or Trolox (2.5 mg/kg) was dissolved in DMSO and administered intravenously in 0.3 mL PBS after 9 h of pMCAO.
+ Open protocol
+ Expand
9

Patch-Clamp Electrophysiology Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Electrophysiological recording was performed using a patch/whole cell clamp amplifier (Axopatch 200B) [39 (link)]. A micropipette was filled with an internal solution (in mM) containing KCl (140), MgCl2 (2), HEPES (10), EGTA (11), and ATP (5); the solution’s osmolarity was adjusted to 340 mosmol/kg with sucrose and its pH was adjusted to 7.4 with KOH. The external solution (in mM) contained NaCl (150), KCl (5), CaCl2 (2.5), MgCl2 (1), HEPES (10), and D-glucose (10); the solution’s osmolarity was adjusted to 340 mosmol/kg with sucrose, and its pH was adjusted to 7.4 with NaOH. The resistance of the recording electrodes was in the range of 1 to 4 MΩ, with 3 MΩ being optimal. A small patch of membrane underneath the tip of the pipette was aspirated to form a seal (1–10 GΩ), and then more negative pressure was applied to rupture it to establish a whole-cell mode. The holding potential (HP) was set to −60 mV. A-438079 (a selective antagonist of P2X7 receptor, Tocris Bioscience, Ellis-ville, MO), BzATP, and ATP (Sigma Company) were dissolved in the external solution and delivered by gravity flow from an array of tubules (500 μm O.D., 200 μm I.D.) connected to a series of independent reservoirs. The distance from the tubule mouth to the examined cell was approximately 100 μm. Rapid solution exchange was achieved by shifting the tubules horizontally with a micromanipulator.
+ Open protocol
+ Expand
10

Enteric Glial Cell Inhibition Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
The immortalized rat enteric glial cell (EGC) line PK060399egfr (ATCC CRL-2690, VA, United States), which has been shown to exhibit similar morphology and functional properties to primary enteric glial cells (37 (link)), was cultured in Dulbecco’s Modified Eagle’s Medium (DMEM, Gibco) and supplemented with 10% fetal bovine serum, 1% antibiotics (100 μg/mL penicillin and 100 μg/mL streptomycin, Gibco) and 1 mM sodium pyruvate (Gibco) at 37°C in a humidified incubator under 5% CO2 for no more than 16 passages. For all experiments, EGCs were released using 0.05% trypsin-EDTA for 5 min. Cells were incubated with 10 and 50 µM 10Panx trifluoroacetate (Panx1 inhibitor, Sigma-Aldrich SML2152) or 300 µM A438079 (P2X7R antagonist, Tocris 2972) 1 h before incubation with TcdA (50 ng/mL) or TcdB (1 ng/mL). All drug concentrations used were based on MTT assay results (Figure S1). Purified TcdA and TcdB (TechLab, VA, United States) produced by C. difficile strain VPI10463 were used in this study.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!