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11 protocols using pi apoptosis detection kit 1

1

Radioresistant Cell Apoptosis Analysis

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B16-F1 and Cloudman cells were γ-irradiated (70 Gy, Siemens lineal accelerator, Instituto Alexander Fleming, Buenos Aires) and stored in liquid nitrogen. Cells were thawed and cultured using the corresponding culture media for each cell line. Non-adherent and adherent cells were collected. Apoptosis and necrosis were determined with FITC-Annexin V (AnV) – propidium iodide (PI) Apoptosis Detection Kit I (BD Biosciences) following the manufacturer’s recommendations, measured by flow cytometry (FACSCalibur Flow Cytometer, Becton Dickinson) and analyzed using FlowJo 7.6 software.
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2

Annexin V-FITC/PI Apoptosis Assay

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The cells were harvested after 48-h drug treatment and washed twice with ice-cold phosphate-buffered saline (PBS). The cells were then re-suspended in 1× Binding Buffer (1 × 106 cells/mL), stained with Annexin V-FITC and propidium iodide (PI) Apoptosis Detection Kit I (BD Pharmingen, La Jolla, CA, USA) in the dark at room temperature and then analyzed using a BD FACSCanto™ flow cytometry system within 1 h (FACSCanto™ II; Becton Dickinson, Franklin Lakes, NJ, USA). The data was compensated and analyzed by FlowJo software (version 10, Tree Star, Ashland, Oregon, USA).
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3

Quantifying Apoptosis via Annexin V-FITC

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Apoptosis was quantified using the fluorescein isothiocyanate annexin V-FITC and propidium iodide (PI) Apoptosis Detection Kit I (BD Pharmingen, La Jolla, CA, USA) according to the manufacturer’s instructions. Briefly, CKD-602-treated and non-treated 1 × 106 cells were washed in ice-cold phosphate buffered saline (PBS), resuspended in 100 μL of binding buffer, and incubated with 5 μL of annexin V-FITC and 5 μL of PI for 15 min in a dark room, at room temperature, as per manufacturer’s guidelines. Flow cytometric analysis was immediately performed using a FACS Calibur flow cytometer (FACS Calibur; Becton Dickinson, Franklin Lakes, NJ, USA).
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4

Cell Apoptosis and Cell Cycle Assays

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For cell apoptosis assays, the fluorescein isothiocyanate (FITC)–Annexin V and propidium iodide (PI) Apoptosis Detection kit I (BD Pharmingen) was used as previously described [29 (link)]. For cell cycle analysis, PEL cell pellets were fixed in 70% ethanol, and incubated at 4°C overnight. Cell pellets were re-suspended in 0.5 mL of 0.05 mg/mL PI plus 0.2 mg/mL RNaseA and incubated at 37°C for 30 min. Cell cycle distribution was analyzed on a FACS Calibur 4-color flow cytometer (BD Bioscience).
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5

Cell Proliferation and Apoptosis Assays

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Cell proliferation was measured by using the WST-1 assays (Roche) according to the manufacturers' instructions. For apoptosis assays, the FITC-Annexin V and propidium iodide (PI) Apoptosis Detection Kit I (BD Pharmingen) was used. Samples were analyzed on a FACS Calibur 4-color flow cytometer (BD Bioscience).
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6

Immunophenotyping and Apoptosis Analysis

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Rat anti-mouse mAbs (Affymetrix eBioscience), which included fluorescein isothiocyanate- (FITC-) labeled anti-CD4 (0.3 μl, No11-0041) as well as phycoerythrin- (PE-) labeled anti-CD8a (0.7 μl, No11-0081), were utilized to stain cells from blood specimens for a 15 min period in dark. After adding hemolysin (250 μl), the cells were subject to further 15 min incubation in the dark and PBS rinsing thrice. CD4+/CD8+ ratio was determined as the ratio of average fluorescence intensity of CD4+ lymphocytes to that of CD8+ cells detected using the flow cytometer (Beckman coulter, Navios, USA).
THCA cells undergo certain treatments, including staining using Annexin V-FITC and propidium iodide (PI) Apoptosis Detection Kit I (BD, USA) in line with specific instructions, and cell apoptosis was analyzed through FACS (BD, USA).
Data analysis was completed using Cell Quest Research Software (BD, USA).
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7

Radioresistant Cell Apoptosis Analysis

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B16-F1 and Cloudman cells were γ-irradiated (70 Gy, Siemens lineal accelerator, Instituto Alexander Fleming, Buenos Aires) and stored in liquid nitrogen. Cells were thawed and cultured using the corresponding culture media for each cell line. Non-adherent and adherent cells were collected. Apoptosis and necrosis were determined with FITC-Annexin V (AnV) – propidium iodide (PI) Apoptosis Detection Kit I (BD Biosciences) following the manufacturer’s recommendations, measured by flow cytometry (FACSCalibur Flow Cytometer, Becton Dickinson) and analyzed using FlowJo 7.6 software.
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8

Silymarin Hepatoprotective Mechanism Investigation

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Silymarin, hydroxyproline, p-dimethylaminobenzaldehyde,1,1, 3,3-tetraethoxypropane (TEP), chloramines-T, 5,5-dithiobis-2-nitrobenzoic acid (DTNB), glutathione (GSH), β-nicotinamide adenine dinucleotide phosphate, reduced form (β-NADPH), TAA and other reagents were purchased from Sigma, St. Louis, MO, USA. Dulbecco's modified Eagle's medium (DMEM) and fetal bovine serum (FBS) were acquired from Invitrogen (Carlsbad, CA, USA). Perchloric acid was obtained from GFS Chemical Co. (Columbus, OH, USA). A GOT-GPT assay kit was purchased from Asan Pharmaceutical (Hwaseong-si, Korea). Annexin V-FITC and PI Apoptosis Detection Kit I were acquired from BD Biosciences (San Jose, CA, USA). All other reagents used in this study were of the highest grade available commercially.
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9

Annexin V-FITC Apoptosis Assay

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Cells were harvested and washed with precooled PBS. Then, the cells were stained with 5 μl of annexin V‐FITC (annexin V‐FITC/propidium iodide (PI) apoptosis detection kit I, BD Biosciences) according to the manufacturer's instructions.
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10

Quantifying Apoptosis by Flow Cytometry

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Apoptotic incidence was detected using the Annexin V-Fluorescein Isothiocyanate (FITC) [Phycoerythrin (PE) for direct co-culture]/propidium iodide (PI) Apoptosis Detection kit I (BD Pharmingen, San Diego, CA, USA), according to the manufacturer's instructions. The samples were analyzed on a fluorescence activated cell sorter (Cytomics FC500; Beckman Coulter) within 1 h. Apoptotic cells, including annexin-positive/PI-negative in addition to double-positive cells, were counted and represented as a percentage of the total cell count.
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