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9 protocols using gb11229

1

Immunofluorescence Analysis of Pyroptosis Pathway

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Mouse corneal sections and HCECs on 6-chamber slides were fixed with 4% paraformaldehyde (Solarbio, #P1110) and permeabilized with 0.2% Triton X-100 (Sigma–Aldrich, #9036-19-5) at room temperature for 10 min. The samples were then incubated with NLRP3 (1:50, Novus Biologicals, #NBP2-12446SS), ASC (1:50, Santa Cruz Biotechnology, #sc-514414), CASP1 (1:200, ABclonal, #A0964), GSDMD (1:100, ABclonal, #A18281) and Ly-6G antibodies (1:200, Servicebio, #GB11229) at 4°C overnight, followed by incubation at room temperature with secondary antibodies (1:300, Servicebio, #GB21303) for 1 h. For TdT-mediated dUTP nick end labeling (TUNEL) staining, the sections were incubated with TUNEL dye (Beyotime, #1086) for 30 min under shade. Nuclei were labeled with DAPI for 10 min. Finally, the samples were observed and photographed with a Leica TCS SP5 confocal microscope (Leica, Germany). For further detection the pyroptotic cells in corneal tissues, double-immunofluorescence staining of active CASP1 and TUNEL was performed on corneal sections. Active CASP1+/TUNEL+ cells were determined as pyroptotic cells (24 (link)).
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2

Histological and Immunohistochemical Analysis of Mouse Liver Tissue

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H&E staining was used to assess the necrosis of the liver. Paraffin-embedded sections of mouse liver tissues were sectioned to 4 μm slides. After deparaffinization and rehydration, the histomorphology analysis was carried out using H&E staining. For IHC staining, liver samples were dehydrated, paraffin embedded and sectioned to 4 μm slides. After incubating with primary antibodies of CD68 (GB11067, Servicebio, 1:50 dilution), Ly6g (GB11229, Servicebio, 1:50 dilution), and BAX (GB11007-1, Servicebio, 1:50 dilution) at 4°C overnight, the slides were washed and incubated with appropriate secondary antibodies conjugated with HRP were added for 1 h at room temperature. A 3,3′-diaminobenzidine (DAB) (ZLI-9032, Zhongshan Biotech, Beijing, China) was used to observed the sections followed by hematoxylin counterstaining. Images were visualized using a light microscope (Olympus, Tokyo, Japan).
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3

Multimodal Analysis of Lung Tissue

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Tissues were fixed with 4% PFA, embedded in paraffin, and sectioned. H&E (G1005, Servicebio, China) and Masson's trichrome (G1006, Servicebio) staining were conducted according to the manufacturer's instructions, respectively. For immunofluorescence analysis, deparaffinized slices were incubated with an Improved Citrate Antigen Retrieval Solution (P0083, Beyotime), and stained with primary antibodies against Sftpc (ab211326, Abcam, USA), Ki67 (GB121141, Servicebio), β‐catenin (8480S, Cell Signaling Technology, USA), and DAPI (C1002, Beyotime). Tunel staining (G1502, Servicebio) was performed according to the manufacturer's instructions. For immunohistochemistry staining of macrophages and neutrophils, deparaffinized slices were incubated with F4/80 (GB113373, Servicebio) and Ly6G (GB11229, Servicebio) antibodies, respectively. For immunocytochemistry analysis, cells were fixed with 4% PFA and stained with primary antibodies against BRACHYURY (ab209665, Abcam) and Oct4 (sc‐5279, Santa Cruz).
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4

Immunohistochemical Profiling of T Cells, Macrophages, and Neutrophils

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Tissues were fixed in 10% neutral buffered, formalin and paraffin embedded and standard IHC was performed using rabbit anti-CD3 pAb (1:150 dilution; GB13014; Servicebio). Serial sections were stained with rabbit anti-CD68 pAb (1:500 dilution; GB11067, Servicebio) and rabbit anti-LY6G pAb (1:500 dilution; GB11229, Servicebio) and visualized using peroxidase/DAB. Negative controls were included by incubation of the sections only with a secondary antibody. Quantification was performed by counting positive cells in 6 to 10 high-powered fields (magnification, ×200) in a blinded fashion.
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5

Quantifying Pancreatic Inflammation Markers

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In order to evaluate the infiltration of inflammatory cells in pancreas, we detected CD45, Ly6G and F4/80 by immunofluorescence. Briefly, Frozen slides are baked in a 37 °C oven for 10–20 min and fix in paraformaldehyde for 30 min. Afterward, the slides were heated in an autoclave within EDTA antigen retrieval buffer (pH 8.0) for antigen repairing, followed by 3% BSA to block non-specific binding. Slides were then incubated with primary antibody including CD45 (GB11066, Servicebio, China, 1:1000), Ly6G (GB11229, Servicebio, China, 1:500) and F4/80 (GB113373, Servicebio, China, 1:500) at 4 °C overnight, and with Cy3 conjugated secondary antibody (GB21303, Servicebio, China, 1:500) at room temperature for 50 min in dark condition. After DAPI counterstain in nucleus, the sections were observed and images collected under the fluorescence microscope. The mean fluorescence intensity (MFI) was analyzed by ImageJ (V1.8.0.112). Five visual fields were randomly selected on each slide for MFI analysis.
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6

IHC Staining Protocol for NLRP3 and Inflammation Markers

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IHC staining was performed according to the commercial kits (PV-6001 and PV-6002, ZSGB-Bio, Beijing, China). Antigen retrieval of the paraffin sections was performed using the same protocol described for IF staining. Subsequently, sections were incubated with 0.3% H2O2 for 10 min to inactivate endogenous peroxidase activity and then washed with PBS. After being blocked with 5% goat serum for 15 min, slices were incubated overnight at 4 °C with the primary antibodies as follows: rabbit anti-NLRP3 antibody (ab214185, 1:200, Abcam), rabbit anti-cleaved-caspase 1 p20 (1:100, AF4005, Affinity), IL-1β (1:100, GTX74034, Gentex), rabbit anti-GSDMD (1:800, ab219800, Abcam), mouse anti-IBA-1 (1:300, GB12105, Servicebio), rabbit anti-Ly6G (1:500, GB11229, Servicebio), rabbit anti-CD68 (1:100, DF7518, Affinity). The sections were incubated with enzyme-conjugated goat anti-mouse IgG or goat anti-rabbit IgG polymer for 30 min. Finally, immunoreactivity was visualized using 3,3-diaminobenzidine (DAB, ZLI-9017, ZSGB-Bio) followed by restaining with hematoxylin. Images were captured by a light microscope (Leica, DM2500, Germany).
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7

Immunofluorescence Staining of Lung Tissue

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Tissues were fixed in 10% buffered formalin and embedded in paraffin. The tissue sections were obtained from lung tissue and stained with hematoxylin–eosin (H&E). For immunofluorescence staining, the sections were rehydrated and washed in PBS, pretreated for 1 h at room temperature with protein block solution (Dako, Carpinteria, CA). After incubation with CD68 (Servicebio, GB14043, 1:200) and LY-6G (Servicebio, GB11229, 1:200) overnight at 4 °C, sections were washed and incubated with fluorescence-labeled secondary antibodies. After the nucleus was stained with Hoechst (Invitrogen, USA), samples were examined under the microscope.
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8

Analyzing Immune Cell Infiltration in Liver Tissue

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Liver tissue sections were stained with H&E staining. To detect neutrophils, macrophages and lymphocytes in the liver tissue, paraffin-embedded mouse liver sections were stained by antibodies against Ly6G (1:1000, GB11229, Servicebio, Wuhan, China), F4/80 (1:1000, GB11027, Servicebio, Wuhan, China), CD3 (1:1000, GB11014, Servicebio, Wuhan, China) and B220 (1:4000, GB11066, Servicebio, Wuhan, China). To detect NET formation in the liver tissue, the sections were incubated with anti-citH3 (1:200, ab5103, Abcam), anti-NE (1:50, sc-55549, Santa Cruz) and anti-MPO (1:200, AF3667, R&D). 4′,6-Diamidino-2-phenylindole (2 μg/ml, DAPI, Servicebio, Wuhan, China) was used to detect DNA. Finally, slides were visualized using an Olympus microscope (IX73, Tokyo, Japan).
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9

Immunohistochemical Analysis of Lung Tissue

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Lungs from control or virus-infected mice were dissected, fixed in 10% phosphate-buffered formalin and embedded into paraffin blocks. The paraffin blocks were sectioned (5μm) for H & E staining. The immunohistochemistry analysis was performed on the 5 μm sections. The anti-Ly6G antibody (GB11229; Service Bio) and anti-F480 antibody (GB11027; Service Bio) were used for immunohistochemistry analysis, resulted in a brown-colored precipitate at the antigen site. Subsequently, sections were counterstained with hematoxylin for 10 min and cover slipped. Pictures were acquired using a Histo FAXS system.
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