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Mini protean tris glycine gels

Manufactured by Bio-Rad

The Mini-PROTEAN Tris-glycine gels are a pre-cast polyacrylamide gel system designed for SDS-PAGE (sodium dodecyl sulfate-polyacrylamide gel electrophoresis) analysis. These gels are made with a Tris-glycine buffer system and are available in a variety of gel concentrations and well formats to suit different protein separation needs.

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6 protocols using mini protean tris glycine gels

1

Lysis and Western Blot of Transfected Cells

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Transfected cells were scraped from six-well dishes and lysed with lysis buffer (50 mM Tris-HCl pH7.4, 1% Nonidet P-40, 150 mM NaCl, 1 mM EDTA, 1× protease inhibitor mixture (Sigma)) for 30 min at 4 °C. The insoluble pellet was removed following a 10,000 rpm spin for 5 min at 4 °C. Lysates were analyzed by SDS-PAGE/western blot using 4–20% Mini-PROTEAN Tris-glycine gels (Bio-Rad) transferred to PVDF membranes and blocked in 5% milk containing PBS-Tween-20 (0.1%) for 1 h. PVDF membranes were then incubated with specified primary antibodies followed by incubation with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz Biotechnology) and detected using enhanced chemiluminescence (GE Healthcare). HA antibodies were used at a dilution of 1:2000 and Flag antibodies were used at a dilution of 1:1000.
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2

Western Blot Analysis of Cellular Proteins

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Cells were lysed in RIPA buffer (150 mM NaCl, 1% IGEPAL CA-630, 0.5% of sodium deoxycholate, 0.1% sodium dodecylsulfate [SDS], and 50 mM Tris) supplemented with protease inhibitor cocktail (Biovision, Milpitas, CA). Total protein concentration of the lysates was measured using bicinchoninic acid (BCA) assay (Thermo Fisher) with BSA as a standard. Proteins were resolved via SDS–PAGE in 10% Mini-PROTEAN Tris-glycine gels (Bio-Rad, Hercules, CA) and wet transferred to 0.45 μm nitrocellulose membrane (GE Healthcare). Membranes were blocked with either 5% milk dissolved in Tris buffered saline (TBS) or Intercept TBS blocking buffer (LI-COR Biosciences, Lincoln, NE) for 1 h at room temperature, then incubated overnight at 4°C with primary antibodies diluted in the blocking solution containing 0.1% Tween-20. Membranes were washed in TBS, 0.1% Tween-20 (TBST) and incubated with HRP- or IRDye-conjugated secondary antibody diluted at 1:5000 in blocking solution containing 0.1% Tween-20. After washing, protein signals were detected via enhanced chemiluminescence (Western Lightning Plus ECL; Perkin Elmer, Waltham, MA) followed by exposure to film (CL-XPosure; Thermo Fisher). For quantitative blots, protein signals were detected on LI-COR Odyssey CLx and quantified using Empiria Studio software.
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3

Western Blot Analysis of BMP Signaling

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Cell lysates were diluted in Laemmli sample buffer containing β-mercaptoethanol and denatured at 100°C for 10 minutes. Samples were loaded on 4–15% mini-Protean tris/glycine gels (Biorad) and protein transferred to nitrocellulose. Membranes were blocked for 1 hour at room temperature in 5% milk then blotted overnight with one of the following primary antibodies: 1:500 rabbit anti-Smad1/5/8 (Cell Signaling), 1:500 rabbit anti-Smad1 (Cell Signaling), 1:500 rabbit anti-BMP4 (Abcam), or 1:500 rabbit anti-BMP2 (Abcam). After washes with 1x TBS/T, blots were incubated for 3 hours at room temperature with 1:3000 goat anti-rabbit secondary antibody (Cell Signaling). Blots were developed using SuperSignal West Pico Chemiluminescent substrate (Thermo Scientific) and exposed to film.
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4

Protein-Protein Interaction Assay

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HEK293T cells were co-transfected with Flag-tagged target protein, HA-tagged source protein, and GFP-tagged peptide or GFP. Cells were lysed 48 h after transfections with radioimmune precipitation assay buffer (50 mM Tris-HCl pH 7.4, 1% Nonidet P-40, 150 mM NaCl, 1 mM EDTA, 10 mM Na3VO4, 10 mM sodium pyrophosphate, 25 mM NaF, 1× protease inhibitor mixture (Sigma)) for 30 min at 4 °C and co-immunoprecipitated with Flag beads (Clontech). The resulting immunocomplexes were analyzed by immunoblot using the appropriate antibodies. Protein samples were separated using 4–20% Mini-PROTEAN Tris-glycine gels (Bio-Rad) transferred to PVDF membranes and blocked in 5% milk containing PBS-Tween-20 (0.1%) for 1 h. PVDF membranes were then incubated with specified primary antibodies followed by incubation with horseradish peroxidase-conjugated secondary antibodies (anti-mouse HRP-linked, Cell Signaling, catalog #7076, 1:5000; anti-rabbit HRP-linked, Cell Signaling, catalog #7074, 1:5000) and detected using enhanced chemiluminescence (GE Healthcare). HA antibodies were obtained from Santa Cruz (catalog #7392, 1:2000), GFP antibodies were purchased from Abcam (catalog #ab290, 1:2000), and Flag antibodies were purchased from Sigma (catalog #A8592, 1:1000).
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5

Polyglutamine Disease Protein Analysis

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Protein lysates were resolved on 4–15% Mini-PROTEAN Tris-Glycine gels (Bio-Rad) and transferred to an Invitrolon and Immobilon-P polyvinylidene fluoride membrane. Membranes were blocked with 5% skimmed milk in TBST (1× Tris-buffered saline, 0.1% Tween 20) and incubated overnight with primary antibodies: anti-polyQ disease protein antibody, 1:1,000, Merck Millipore MAB1574 (clone 5TF1-1C2) and anti-beta tubulin, 1:5,000, catalog no. ab6046 (Abcam) diluted in blocking solution at 4 °C. After three 10-min washes in TBST, the blots were incubated with the appropriate horseradish peroxidase (HRP)-conjugated secondary antibodies (anti-rabbit IgG (catalog no. NEF812001) and anti-mouse IgG (catalog no. NEF822001EA); PerkinElmer) diluted in blocking solution. After three 10-min washes in TBST, the blots were developed using Western Lightning Plus-ECL enhanced chemiluminescence substrate (PerkinElmer). Phosphorylation of protein was detected via the addition of alkaline phosphatase to the protein lysate (1:1,000, catalog no. 10567752001; Merck Millipore) before to SDS–polyacrylamide gel electrophoresis.
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6

Co-Immunoprecipitation of Protein Complexes

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HEK293T cells were cotransfected with Flag-tagged protein and HA-tagged protein. Cells were lysed 48 h after transfections with radioimmune precipitation assay buffer (50 mM Tris-HCl pH7.4, 1% Nonidet P-40, 150 mM NaCl, 1 mM EDTA, 10 mM Na3VO4, 10 mM sodium pyrophosphate, 25 mM NaF, 1× protease inhibitor mixture (Sigma)) for 30 min at 4 °C and coimmunoprecipitated with Flag beads (Clontech). The resulting immunocomplexes were analyzed by Western blot using the appropriate antibodies. Protein samples were separated using 4–20% Mini-PROTEAN Tris-glycine gels (Bio-Rad) transferred to PVDF membranes and blocked in 5% milk containing PBS-Tween-20 (0.1%) for 1 h. PVDF membranes were then incubated with specified primary antibodies followed by incubation with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz Biotechnology) and detected using enhanced chemiluminescence (GE Healthcare).
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