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7 protocols using ma5 12023

1

Immunostaining and Characterization of Microvascular Networks

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MVNs were fixed with 4% PFA (Thermo Scientific, 11490570) for 1 h at RT, permeabilized with 0.1% Triton X-100 (Sigma-Aldrich, T8787) for 10 min at RT and blocked with 10% Donkey Serum (PAN-Biotech, PANP30-0101). MVNs were then stained with primary antibodies diluted 1:100-1:200 in blocking buffer, overnight at 4 °C. We used anti-CD31 (Abcam, ab24590), anti-PDGFRβ (Abcam, ab32570), anti-S100b (Sigma, S2532), anti-desmin (ab15200), anti-GFAP (Invitrogen, MA5-12023), anti-CLDN5 (Invitrogen, 341600), anti-ZO-1 (Thermo Fisher, 339100), anti-VE-cadherin (Abcam, ab33168), anti-laminin (Abcam, ab7463) and anti-collagen type IV (Sigma, MAB1910) antibodies. Devices were then washed 5 times with 1× PBS for >5 min, and stained with corresponding secondary antibodies Alexa Fluor 488 donkey anti-rabbit (Invitrogen, A-21206) or Alexa Fluor 647 donkey anti-mouse (Invitrogen, A-31571) diluted 1:250 in blocking buffer, overnight at 4 °C. Devices were washed again 5 times with 1X PBS for >5 min, stained with lectin Ulex europaeus agglutinin I (UEA I) Rhodamine (Vector Laboratories, RL-1062-2) or phalloidin (Invitrogen, R37112) and DAPI (Invitrogen, R37606), and washed overnight at 4 °C.
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2

Immunofluorescent Staining of Mouse Brain

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At the end of all experiments, mice were intraperitoneally injected with CNO or vehicle for 1 h, and then deeply anesthetized with sodium pentobarbital. After perfusion with .01 M phosphate buffer saline (PBS), the brain tissues were removed and post-fixed with 4% paraformaldehyde then placed in 20% and 30% sucrose solutions for dehydration at 4°C. The brain tissue was sliced and mounted on a slide. The slices were washed with PBS and incubated with .7% TritonX100 in a 37°C-incubator for 1 h. The slices were then incubated with mouse-anti-GFAP antibody (1:1,000, MA5-12023, Invitrogen) or mouse-anti-NeuN antibody (1:1,000, MAB377, Millipore) at 37°C for 24 h. Then, the slices were incubated with donkey-anti-mouse-Alexa Fluor 594 (1:1,000, 715–585-151, Jackson) at 37°C for 2 h after 15 min PBS washes.
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3

Immunohistochemical Analysis of Neural Stem Cells

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Paraffin embedded slices were deparaffined and antigen retrieval carried out by incubating the samples in a 10 mM sodium citrate solution at pH 6 + 0.05% Tween20 in distilled water, where they were boiled 3 times, maintained at 95–98 °C for 20 min and finally cooled at room temperature. After blocking in 5% bovine serum albumin buffer, brain samples were incubated overnight with the following primary antibodies: mouse anti-GFAP (1:100, MA5-12023, Thermo Fisher) to label radial-glia/neural stem cells and then assess neurogenic activity close to the ventricular wall; mouse anti-DCX (doublecortin,1:50, sc-271390, Santa Cruz Biotechnology) to identify young neurons/neuroblasts; and mouse anti-Ki67 (1:50, STJ96966, St Johns Labs, UK) to label dividing cells/proliferation. To study the proliferation of neural stem/progenitor cells, we performed a double immunohistochemistry with Ki67 and Sox2 (1:100, Santa Cruz Biotechnology) for cell colocalization. The day after, brain samples were incubated with Alexa Fluor 488 and/or Texas Red secondary antibodies (both 1:300, Thermo Fisher) for 1 h at room temperature in the dark, and, after several washes, slices were mounted (F4680, Sigma). Negative controls received identical treatment except for omission of primary antibodies and showed no specific staining.
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4

Immunofluorescence Analysis of SIX1, EYA1, and Cell Markers

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Frozen sections were fixed with 100% ethanol for 15 minutes and permeabilized using 0.05% Tween20 twice (2 minutes per treatment). Blocking was performed using 3% bovine serum albumin for 30 minutes at RT. After washing with phosphate belanced solution (PBS), sections were incubated with rabbit anti-human SIX1 primary antibody (1:100 dilution) (HPA001893, Sigma, St. Louis, MO, USA), rabbit anti-human EYA1 primary antibody (1:100 dilution) (ab85009, Abcam, Cambridge, MA, USA), and mouse anti-human HSA primary antibody (1:1,000 dilution) (MAB1455, R&D Systems, Minneapolis MN, USA) or mouse anti-human GFAP primary antibody (1:100 dilution) (MA5-12023, ThermoFisher, Waltham, MA, USA) at 4 °C overnight. Sections were then incubated with Alexa Fluor®488 donkey anti-mouse immunoglobulin G (IgG) and Alexa Fluor®568 donkey anti-rabbit IgG (1:1,000 dilution) (A21202, A10042, ThermoFisher, Waltham, MA, USA) for one hour at RT. After washing with PBS, sections were counterstained with 4',6-diamidino-2-phenylindole (DAPI). Finally, coverslips were mounted with anti-fade mounting medium, and immunofluorescent signals were visualized and recorded using an Olympus DP72 microscope and the cellSens Standard 1.5 software. (Olympus Corporation, Tokyo, Japan)
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5

Immunohistochemistry and Immunocytochemistry Protocols

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Immunohistochemistry and immunocytochemistry were performed according to the routine methods. Dilutions of the primary antibodies were as follows: rat anti-MBP (1:200; SAB2108749, Sigma-Aldrich), rabbit anti-Olig2 (1:200; 387R-1, Sigma-Aldrich), rabbit anti-NG2 (1:200; SAB5700198, Sigma-Aldrich), mouse anti-NG2 (1:300, 14–6504-82, Sigma-Aldrich), monoclonal antibody CC1 (1:200, 17–0661-82, Thermofisher Scientific), rabbit anti-PDGFa (1:500, PA5-50,565, Thermofisher Scientific), mouse monoclonal anti-Ki67 antibody (1:200, MIB1, SANTA CRUZ), polyclonal anti-ADAM10 (1:100; ZRB2367; Sigma-Aldrich), anti-GFAP (1:200, MA5-12,023, Thermofisher Scientific), anti-NeuN (1:100, 66,836–1-Ig, Proteintech), and anti OX42 (1:300, ab33827, Abcam). Samples were incubated with corresponding primary antibodies overnight at 4 °C, followed by rinsing in PBS, and stained with Cy3 (1:1000; Invitrogen, Carlsbad, CA, USA) or Alexa Fluor 488-conjugated secondary antibodies (1:1000; Invitrogen) for 1 h at room.
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6

Immunofluorescence Staining of Neural Cells

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Cells were cultured on glass coverslips. At the required time, they were fixed in 4% paraformaldehyde (PFA) for 15 min at room temperature (RT), washed three times with PBS and permeabilized with 0.2% Triton X-100 in PBS. Next, cells were blocked with a blocking buffer (5% bovine serum albumin in 0.1% Tween-PBS) for 1 h at RT. Primary antibodies were applied overnight at 4°C at dilutions 1:500 P2X7R (APR-004, Alomone Labs), 1:500 beta-III-tubulin (802001, BioLegend), 1:500 IBA1 (ab5076, Abcam), 1:1,000 Nestin (MAB5326, Sigma), 1:1,000 CD11c (ab52632, Abcam), GFAP 1:500 (MA5-12023, Thermo Fisher Scientific), 1:500 TMEM119 (PA5-62505, Thermo Fisher Scientific). Then the cells on coverslips were washed 0.1% Tween-PBS. Subsequently, appropriate secondary antibodies were applied to the cells for 1 h (at RT). Stained cells were mounted with ProLong™ Diamond Antifade Mountant with DAPI (Thermo Fisher Scientific) and analyzed under a fluorescence microscope (Axio Imager system with ApoTome; Carl Zeiss MicroImaging GmbH, Göttingen, Germany) controlled by AxioVision 4.8.1 software (Carl Zeiss MicroImaging GmbH).
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7

Fluorescence Immunohistochemistry of Neural Markers

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Brain slices for fluorescence immunohistochemistry were managed as detailed in the “Immunohistochemistry” section until incubation with primary antibody. For single labeling, radial-glia/neural stem cells were identified using an anti-glial fibrillary acidic protein (GFAP) antibody to assess neurogenic activity close to the ventricular wall (mouse anti-GFAP, 1:100, MA5-12023, Thermo Fisher, United States); an anti-doublecortin (DCX) antibody was used to identify young neurons/neuroblasts (mouse anti-DCX, 1:50, sc-271390, Santa Cruz Biotechnology, United States); cell proliferation was identified by an anti-Ki67 antibody (mouse anti-Ki67; 1:50, STJ96966, St Johns Labs, United Kingdom). Double immunohistochemical staining was used to detect the cellular co-localization of Ki67 with Sox2 (neural stem/progenitor cells; 1:100, Santa Cruz Biotechnology, United States). Immunoreactivity was revealed using Alexa Fluor 488 and Texas Red (1:300, Thermo Fisher, United States) secondary antibodies incubated in the dark for 1 h at room temperature. After final washes, fluoromount aqueous mounting medium (F4680, Sigma) was added, and each section was covered by a cover slip. Negative controls received identical treatment except for the omission of primary antibodies and showed no specific staining.
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