The largest database of trusted experimental protocols

6 protocols using rabbit anti e cadherin antibody

1

Fluorescence Imaging of EMT Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were transfected with miRNA oligonucleotides or inhibitors, as described in the section of oligonucleotide transfection, plated onto glass coverslips in Millicell EZ SLIDES (Merck Millipore, Bedford, MA, USA) and stained after 96 h. For E-Cadherin and Vimentin staining, cells were fixed in 4% paraformaldehyde, permeabilized in 0.1% Triton X-100 and probed with rabbit-anti-E-Cadherin antibody (1:200; Proteintech Technology, Chicago, IL, USA) or mouse-anti-Vimentin antibody (1:1000; Proteintech Technology) overnight at 4 °C. The primary antibody was detected using anti-rabbit-Alexa594 or anti-mouse-Alexa488-conjugated antibodies (1:200; Invitrogen). To detect nuclei, cells were co-stained with 4,6-diamidino-2-phenylindole. Fluorescence was observed and imaged using a ZEISS ScopeA1 microscope (Carl Zeiss, Jena, Germany).
+ Open protocol
+ Expand
2

Protein Expression Analysis by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
The total proteins were collected by lysis buffer with protease inhibitors. The detection procedure of specific proteins levels by western blot was listed in our previous study [16 (link)]. The primary antibodies (1:1000) were shown as follows: rabbit anti-Bcl2 antibody (Boster, China), rabbit anti-DOCK1 antibody (CST, USA), rabbit anti-E-cadherin antibody (Proteintech, USA), rabbit anti-Ezrin antibody (Proteintech, USA), mouse anti-GAPDH antibody (CST, USA), rabbit anti-MMP9 antibody (CST, USA), rabbit anti-tubulin antibody (ABclonal, China), rabbit anti-phospho-C-Raf (S338) antibody (CST, USA), rabbit anti-C-Raf antibody (CST, USA), rabbit anti-phospho-ERK1/2 (Thr202/Tyr204) antibody (CST, USA), rabbit anti-ERK1/2 antibody (CST, USA). The chemiluminescence method was used to display the bands.
+ Open protocol
+ Expand
3

Western Blot Analysis of EMT Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells and tissues were lysed with RIPA lysis buffer (Beyotime). After quantification with a BCA kit, total proteins were separated using sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). The proteins were then transferred onto a PVDF membrane (Millipore) and sealed with 5% skim milk. The PVDF membranes were then incubated with primary antibodies overnight at 4 °C, followed by incubation with HRP-conjugated goat anti-rabbit IgG and HRP-conjugated goat anti-mouse IgG (1:5000, Proteintech) for 60 min at 37 °C. Primary antibodies: rabbit anti-ETS1 antibody (1:1000, Abcam), rabbit anti-Snail antibody (1:1000, Abcam), rabbit anti-E-cadherin antibody (1:500, Proteintech), rabbit anti-N-cadherin (1:1000, Proteintech) and mouse anti-GAPDH antibody (1:3000, Proteintech).
+ Open protocol
+ Expand
4

Immunohistochemical Analysis of FBXO28, Cadherins, and Ki67 in Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
The paraffin sections containing tissues were placed in a drying oven at 60 ℃ for 2 h to finish baking the slices, which were subsequently dewaxed with xylene and gradient ethanol. The tissues were soaked in sodium citrate buffer solution with a heated boil, after which antigen retrieval was completed. The endogenous enzyme activity was inactivated by hydrooxidase, 5% bovine serum albumin (BSA) was used to block the tissue sections, which were incubated overnight at 4 ℃ with primary antibodies, including rabbit anti-FBXO28 antibody (1:100; Abcam), rabbit anti-N-cadherin antibody (1:200; Proteintech), rabbit anti-E-cadherin antibody (1:100; Proteintech) and mouse anti-Ki67 antibody (Zsbio, China). After the sections were incubated at room temperature with the corresponding secondary antibodies, DAB and hematoxylin were used to stain the sections. The staining intensity was scored according to the following criteria: 0 (blue, feminine), 1 (light yellow, weakly positive), 2 (brownish, yellow, moderately positive), or 3 (dark brown, strong positive). The staining area was scored as 1 (≤ 25% of positive cells), 2 (26–50% of positive cells), 3 (51–75% of positive cells), or 4 (≥ 75% of positive cells). The IHC staining was calculated by multiplying the staining intensity score and positive staining percentage score [27 (link)].
+ Open protocol
+ Expand
5

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein was extracted by using RIPA lysis buffer containing 1% phenylmethanesulfonyl fluoride (PMSF) (Beyotime, Shanghai, China) after being lysed on ice, ultrasonicated and centrifuged. Based on the protein concentration determined by the BCA protein detection kit (Beyotime, China), an equally concentrated protein mixture was prepared with loading buffer solution (Biosharp, Hefei, China). The target proteins were separated via 8% or 10% SDS‒PAGE gel. Then proteins were subsequently transferred to a PVDF membrane at 300 mA for 90 min to complete the transmembrane. After 5% skim milk powder was added for 1 h, the membrane was incubated with primary antibodies at 4 ℃ overnight, which include rabbit anti-FBXO28 antibody (1:1000; abcam), rabbit anti-TGF-b1antibody (1:1000; abways), rabbit anti-Smad2/3 antibody (1:1000; CST), rabbit anti-p-Smad2/3 antibody (1:1000; CST), rabbit anti-N-cadherin antibody (1:1000; Proteintech), rabbit anti-E-cadherin antibody (1:1000; Proteintech), mouse anti-GAPDH antibody (1:5000; Proteintech) and rabbit anti-β-Tubulin (1:2000; Proteintech). After the corresponding secondary antibody was added and incubated at room temperature for 1 h, the proteins were visualized via an enhanced chemiluminescence kit (Meilunbio, China).
+ Open protocol
+ Expand
6

Immunofluorescence Staining of GCN5L1, E-cadherin, and αSMA

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were fixed with 4% paraformaldehyde for 20 minutes, permeabilized in 0.5% Triton X-100 for 10 minutes, and then blocked with 1% goat serum for 1 hour at room temperature. Then, cells were incubated with mouse anti-GCN5L1 antibody (Santa Cruz, sc515444), rabbit anti-E-cadherin antibody (Proteintech, 20874-1-AP), and rabbit anti-αSMA antibody (Proteintech, 55135-1-AP) overnight at 4°C. Secondary antibody (Alexa Fluor 488 Goat Anti-Rabbit IgG H&L, ab150077, 1 : 500) was used to stain the cells, and DAPI nuclear stain was used to counterstain. Images were obtained using a Nikon microscope.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!