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3 protocols using ccr2 bv421

1

Comprehensive Monocyte Phenotyping by Flow Cytometry

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Total blood counts, leucocyte, and monocyte counts were measured with a Sysmex XN-450 Hematology Analyzer (Sysmex Corporation, Kobe, Japan). Undiluted blood (50 µL) was incubated for 15 min in the dark at room temperature with the following antibodies: CD3-APC-750 (mouse, dilution: 1:25; Beckman Coulter, Woerden, The Netherlands), CD56-APC (mouse, 1:25; Beckman Coulter), CD16-FITC (mouse, 1:25; eBioscience Thermo Fisher Scientific, Breda, The Netherlands), CD14-PC7 (mouse, 1:25; eBioscience Thermo Fisher Scientific), CCR2-BV421 (mouse, 1:50 and 1:25; BD Biosciences), CD36-APC-700 (mouse, 1:10; Beckman Coulter), CD41-PC5.5 (mouse, 1:50; Biolegend, San Diego, CA, USA), CD11b-BV785 (mouse, 1:50 and 1:25; Biolegend). Followed by the addition of 1 mL 10× diluted lysis buffer (BD Pharm Lyse; BD Biosciences), samples were mixed and incubated for 10 min in the dark at room temperature. Samples were then measured on a Beckman Coulter FC500 flow cytometer, each sample was measured both stained and unstained. Flow cytometry data were analysed using Kaluza software (Beckman Coulter); for gating strategy, see Supplementary material online, Figure S1. Besides determining the different monocyte subsets (classical, intermediate, or non-classical). Atherogenic markers CCR2, CD36, CD41, and CD11b were determined per monocyte subset.
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2

Immune cell profiling using flow cytometry

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Immune cell subset numbers were measured on a Sysmex XN-450 and Sysmex XN-9000 (Sysmex). FACS analysis was performed in one of the two participating study sites, because this method is sensitive to confounders when performed at different sites. A total of 50 μl of whole undiluted blood was incubated for a duration of 15 min in the dark at room temperature with the following antibodies: CD16-FITC (dilution 1:20), CD14-PC7 (1:20), CCR2-BV421 (1:20) (BD Biosciences, Vianen, the Netherlands); CD41-PC5.5 (1:20), CD11b-BV785 (1:20) (ITK Diagnostics BV, Uithoorn, the Netherlands); HLA-DR-PE (1:10), CD56-APC (1:10), CD3-APC-750 (1:10), CD45-KO (1:10), CD36-APC-700(1:10) (Beckman Coulter, Woerden, the Netherlands). Subsequently, 1 ml of lysis buffer (BD Pharm Lyse, BD Biosciences) was added, samples were mixed, incubated for another 10 min and then measured on a flow cytometer (Beckman Coulter FC500). To determine the position of analysis gates, single staining and fluorescence-minus-one control stains were used (Additional file 1: Fig. S1). To analyse the FACS data, Kaluza software (Beckman Coulter, Woerden, the Netherlands) was used.
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3

Multicolor Flow Cytometry of Immune Cells

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Flow cytometry data were acquired using a Cytek Aurora equipped with violet (405 nm), blue (488 nm), and red (640 nm) lasers. The following antibodies and stains were used: CCR2-BV421 (clone 475301, 747963; BD), Ly6C-BV510 (clone HK1.4, 128033; Biolegend), B220-BV605 (clone RA3-6B2, 103243; Biolegend), Ly6G-BV711 (clone 1A8, 127643; Biolegend), CD11c-BV785 (clone N418, 117336; Biolegend), CX3CR1-A488 (clone SA011F11, 149021; Biolegend), CX3CR1-BV785 (clone SA011F11, 149029; Biolegend), CD163-PE (clone TNKUPJ, 12-1631-80; Thermo Fisher Scientific), CD64-PE/Cy7 (clone X54-5/7.1, 139313; Biolegend), MRC1-PCP5.5 (clone C068C2, 141716; Biolegend), CD11b-PEFire640 (clone M1/70, 101279; Biolegend) TCRb-APC (clone H57-597, 109212; Biolegend), MHCII-A700 (clone M5/114.15.2, 107622; Biolegend), XCR1-APC/Cy7 (clone ZET, 148223; Biolegend), CD45-APC-Fire810 (clone 30F11, 103173; Biolegend), CD45.1-A647 (clone A20, 110720; Biolegend), CD45.2- BV785 (clone 104, 109839; Biolegend), and LIVE/DEAD Violet dead cell stain kit (L34955; Thermo Fisher Scientific). Flow cytometry data was analyzed using Flowjo 10 software. Dimensionality reduction and cluster identification were performed using the UMAP and Phenograph packages, respectively.
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