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Model gc 17a

Manufactured by Shimadzu
Sourced in Japan

The Shimadzu GC-17A is a gas chromatography system designed for the analysis of a wide range of volatile and semi-volatile organic compounds. It features a temperature-programmable oven, a flame ionization detector (FID), and an electronic pressure control system for precise control of carrier gas flow.

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8 protocols using model gc 17a

1

Fruit Postharvest Quality Evaluation

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Fruit firmness, ethylene production, and respiration rate were determined as described previously [26 (link)]. Fruit firmness was determined at five time points for three fruits per replicate, expressed in Newtons. Five fruits per replication were weighed and placed in a 2.5 L plastic container for 2 h at 25 °C before sample collection for the respiration rate and ethylene production assays. The replicate samples of 1 mL of headspace gas were removed and inserted into gas chromatography (Model GC-17A; Shimadzu Co., Kyoto, Japan) for a determination of ethylene, and for CO2 determination, a gas chromatography model G3900 (Shimadzu, Kyoto, Japan) was used. The rates of ethylene production were measured in ng kg−1 s−1, while the rates of CO2 production were measured in mg kg−1 s−1.
A Chromameter-2 reflectance colorimeter (Minolta, Osaka, Japan) coupled with a CR-300 reading head was used to determine the color of each fruit at five different locations around the equatorial zone. Lightness (L*), hue angle (), and chroma (C*) were calculated from the results.
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2

GC-MS Analysis of Volatile Compounds

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SPME fiber was desorbed in the injection port of a Shimadzu Model GC-17A gas chromatograph interfaced with a Shimadzu Model QP-5000 mass spectrometer for 1 min at 210 °C (Kyoto, Japan). A DB5-MS column was used to separate volatiles (J&W Scientific, Santa Clara, CA, USA). For 30 s, injections were performed in the splitless mode. The gas chromatograph was used in the manner described by Farag et al. (2021) [56 (link)]. At 70 eV, the HP quadrupole mass spectrometer was set to electron ionization mode. The scanning speed was set to 40–500 m/z. Peaks were deconvoluted using AMDIS software (www.amdis.net; accessed on 12 July 2022) and identified by their retention indices (RI) relative to n-alkanes (C6–C20), mass spectra matching to NIST, the WILEY library database, and authentic standards when possible [57 (link)]. For quantification, the relative percentile based on peak area was used as previously reported by Farag et al. (2022) [58 (link)].
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3

PA and Ethylene Quantification in Plants

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To analyse the PA contents, the plant samples of WT, OE, osacl5 were collected. 0.3–0.5 g samples per plant were pulverised and the PAs were extracted following a previous method (Liu et al., 2014a (link)). The benozylated PAs were assayed with a programmable Agilent HPLC using a reverse‐phase column (ZORBAX SB‐C18 4.6 × 250 mm, PACKING LOT #: B17225, US), and detected at 254 nm. The ethylene evolution was measured as described previously (Tao et al., 2018 (link)). The gas chromatograph (Model GC‐17A; Shimadzu Co., Kyoto, Japan) fitted with a flame ionisation detector and an activated alumina column (200 cm × 0.3 cm) with an injector temperature of 120 °C, column temperature of 60 °C, and detector temperature of 60 °C as described previously (Shan et al., 2012 (link)).
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4

Tomato Fruit Ethylene, Respiration, and Pigment Analysis

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To measure ethylene production and respiration rates, ten tomatoes randomly sampled from each treatment at each time point, were sealed in a container and held for 3 h at 25 °C. The headspace gas was collected and measured using a gas chromatograph (GC) (Model GC-17A, Shimadzu Co., Kyoto, Japan)66 (link). The ethylene production and respiration rates were expressed as µL kg−1 h−1 and mg kg−1 h−1 fresh weight basis, respectively.
Fruit firmness was determined using a digital force pressure tester equipped with a 2-mm-diameter round plunger with a flat surface (Model Instron 5542, Instron Co., USA)67 (link). Five fruits from each treatment at each time point were measured. Fruit firmness was expressed as mean Newtons (N).
Chlorophyll was extracted by grinding 1 g of fruit pericarp tissue in 5 mL of 80% (v/v) cold acetone and soaked for 30 min at 4 °C. For measurement of the lycopene, 2 g of fruit pericarp tissue was ground in liquid N2 and extracted in 5 mL of dichloroethane for 3 h at 35 °C68 (link). The organic phase of both extracts was collected for detecting the absorbance at 484 and 652 nm using a spectrophotometer (UV2450, Shimadzu Co., Japan). The chlorophyll and lycopene content was expressed as μg g−1 fresh weight.
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5

Alginate Pretreatment and VFA Production

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The raw material for VFAs’ recovery was the fermentation product of a diluted alginate solution. Brown alginate (25 g) was dried, ground, and placed in a 500 mL reactor with 225 mL of 3% sulfuric acid solution, and maintained at 120 °C for 250 min [12 (link)]. The acid-pretreated solution was neutralized with calcium carbonate and filtered to yield a clear solution. Anaerobic fermentation was carried out for 15.5 days with microorganisms obtained from a municipal wastewater treatment plant in Busan, Korea, under the conditions listed in Additional file 1: Table S1). The VFA composition was determined by gas chromatography (Model GC-17A, Shimadzu, Japan,) using a capillary column (50 m × 0.32 mm × 0.50 µm) and a flame-ionization detector. The VFA composition was not significantly different from other studies regarding VFA fermentation, mostly ˂ 1%. The product composition of the other studies is summarized in Additional file 1: Table S2. The fatty acid production rate depended on the fermentation microorganism. As listed in Additional file 1: Table S2, the fermentation feed also affected VFA production, and the production rates among different fatty acids were largely influenced by the microorganism. High microorganism productivity improved economic feasibility of the VFA recovery process.
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6

Volatile Scent Profiling of Blooming Flowers

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The volatile scent of blooming flowers was trapped on SPME (solid phase micro extraction), which was desorbed at the injection port at 210 °C for 1 min. The analysis was performed using Shimadzu gas chromatograph (Model GC-17A) coupled with Shimadzu model QP-5000 mass spectrometer (Tokyo, Japan) according to Farag et al., 201749 (link). The identification of volatile components was established using AMDIS software (https://www.amdis.net) along with their retention indices (RI) as compared to n-alkanes (C6–C20). In addition to, mass spectrum matching with NIST, WILEY library database using matching score more than 800.
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7

GC-MS Analysis of Oregano and Thyme Oils

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We analyzed the chemical components of oregano and thyme EOs using gas chromatography-mass spectrometry (GC-MS) on a Shimadzu Model GC-17A gas chromatograph interfaced with a Shimadzu model QP-5000 mass spectrometer (Shimadzu, Kyoto, Japan). We separated volatiles on a DB5-MS column with specifications: 30 m length, 0.5 mm i.d., and 0.25 μm film (J&W Scientific, Santa Clara, CA, USA). We injected the EOs at a split ratio of 1:10 for the 30 s. We used the following operating conditions: Injector 220 °C, column oven 38 °C for 3 min, then programmed at a rate of 12 °C min−1 to 220 °C and kept for 2 min, His carrier gas at 1 mL min−1. We adjusted the transfer line and ion-source temperatures to 230 and 180 °C, respectively. We operated the HP quadrupole mass spectrometer in the electron ionization mode at 70 eV and set the scan range at m/z 40–500. We identified the volatile components using the procedures described previously [41 (link)]. We identified the resultant peaks after first de-convoluted using AMDIS software (www.amid.net) and we subsequently identified the compounds by their retention indices (RI) relative to n-alkanes (C6–C20), and by matching their mass spectra to the NIST, WILEY library database (>90% match) as well as to those of authentic standards when available.
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8

GC-MS Volatile Compound Identification

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SPME fibers were desorbed manually at 210 °C for 1 min in the injection port of a Shimadzu Model GC-17A interfaced with a Shimadzu model QP-5000 mass spectrometer (Japan). The HP quadrupole mass spectrometer was operated in the electron ionization mode at 70 eV with a scanning range set at m/z 40–500 and a source temperature of 180 °C. Isolation and identification of volatile components were done according to [69 (link)]. Peaks were first de-convoluted using AMDIS software (http://www.amdis.net) and identified by its retention indices (RI) relative to n-alkanes (C6-C20), mass spectrum matching to NIST, WILEY library database (>90% match) and with authentic standards (whenever available).
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