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Pd166866

Manufactured by Merck Group
Sourced in Germany, United States

PD166866 is a laboratory reagent produced by Merck Group. It is a small molecule compound used in scientific research applications. The core function of PD166866 is to serve as a research tool to study cellular processes. No further details on intended use are provided.

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9 protocols using pd166866

1

FGFR1 Inhibition Effects on Oligodendrocytes

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PD166866, a potent FGFR1 tyrosine kinase inhibitor, was used in this study. PD166866 was purchased from Sigma-Aldrich (Steinheim, Germany) and dissolved in DMSO, and above 80% confluent cells were treated with a 10 µM concentration of PD166866 for 3 h. Effects of IFNβ-1a and FGFR1 inhibition on proliferation, cytotoxicity, FGFR signaling, and TrkB/BDNF protein expression in Oli-neu oligodendrocytes were analyzed. Oli-neu culture was performed as described previously [41 (link)]. Briefly, experiments were performed at passages 8–12. To assess the effects of IFNβ-1a and FGFR1 inhibition on cell proliferation, FGFR signaling, and myelin proteins, Oli-neu cells were treated with FGF2 (20 ng/mL), PD166866 (10 μM), IFNβ-1a (400 ng/mL, Rebif®), IFNβ-1a + PD166866, and DMSO. For FGFR signaling activation, stimulation with FGF2 was performed. After 24 h of incubation, protein isolation and western blot were carried out [41 (link)].
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2

Binding Assay for Neuroligin-1 Interactions

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DIV 7 neurons co-transfected with bAP-NLGN1 and PSD-95-GFP were pre-treated for 2 h with 0.5 μM tyrosine kinase inhibitors (FGFR inhibitor PD166866, Sigma-Aldrich PZ0114), pan-Trk inhibitor (GNF5837, Tocris 4559), pan-JAK inhibitor I (Calbiochem 420099) or vehicle (DMSO, concentration 1:2,000). Then neurons were incubated live for 30 min at 37°C with a mix of 10 μL βNRXN1-Fc (at 1 mg/mL) and 5 μL Alexa647-conjugated goat anti-human Fc (Jackson Immunoresearch 1 mg/mL) diluted in 100 μL of Tyrode solution (15 mM D-glucose, 108 mM NaCl, 5 mM KCl, 2 mM MgCl2, 2 mM CaCl2 and 25 mM HEPES, pH 7.4) supplemented with 1% immunoglobulin-free BSA (Sigma-Aldrich A7030). To save protein, coverslips were turned upside down onto the drop placed on a piece of Parafilm. After incubation, neurons were rinsed in warm Tyrode and mounted in an Inox Chamber (Life Imaging Services, Basel) under a TiE Nikon microscope thermostated at 37°C.
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3

Cell Line Authentication and Reagent Use

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HEK293, HEK293T, and human CRC cell lines (DLD-1 and SW480) were purchased from the American Type Culture Collection. The authentication of the cell lines were verified by short tandem repeat (STR) analysis provided by Cosmogenetech (Daejeon, Korea). Cells were propagated at 37°C and 5% CO2 in DMEM (Gibco, Grand Island, NY) or RPMI 1640 (Gibco) supplemented with 10% FBS (RMBI, Missoula, MA) and 1% penicillin-streptomycin (Gibco). The following reagents were administered: MG132 20 μM (Calbiochem, San Diego, CA); cycloheximide (CHX) and rottlerin 50 μg/mL and 6 μM, respectively (both from Santa Cruz, Santa Cruz, CA); EGF 20 ng/mL, FGF2 20 ng/mL, IGF1 50 ng/mL, and VEGF 20 ng/mL (all from Peprotech, Rocky Hill, NJ); Gö6976, Ro31-8220, and PD166866 at concentrations of 2.5 μM, 1 μM, and 100 nM, respectively (all from Sigma-Aldrich, St. Louis, MO); AZD4547 at a concentration of 100 nM (Selleckchem, Houston, TX); and phorbol-12-myristate-13-acetate (PMA) at a concentration of 100 nM (Cell Signaling Technologies, Beverly, MA).
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4

Small-Molecule Embryonic Development Assay

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Stock solutions of 20 mM PD166866 (Sigma-Aldrich, PZ0114) and 10 mM DMH1 (Sigma-Aldrich, D8946) were prepared in DMSO and aliquots were stored at −20°C until use. Treatment solutions were freshly prepared by diluting stock solutions in embryo medium and kept at 28.5°C. The final test concentrations of 8 µM PD166866 and 12 µM DMH1 were selected based on previous studies (Haerlingen et al., 2019 (link)). Embryos treated with 0.1% DMSO served as a vehicle control group for all small molecule treatment experiments. Media were supplemented with 0.01 mg/ml Methylene Blue to prevent bacterial growth and 0.003% PTU to prevent pigmentation.
Two hours before treatment initiation, embryos were staged and stage-matched embryos were pooled and randomly allocated to the different experimental treatments into 60 mm Petri dishes (40-50 maximum per dish). Treatment periods are indicated in the text and in the corresponding figures. All treatments were performed in duplicate. All incubations of embryos in small molecule solutions were performed at 28.5°C in the dark. After completion of small molecule treatment, embryos were washed three times with fresh embryo medium before transfer into clean 96 mm dishes filled with fresh embryo medium.
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5

Characterization of 22Rv1 and VCaP Cell Lines

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22Rv1 and VCaP cell lines were obtained from the American Type Culture Collection (Manassas, VA) and authenticated at this site. Cells were maintained in RPMI-1640 medium supplemented with 10% FBS. 22Rv1 stable transfectants were generated using the CR-1 cDNA cloned into the p3XFLAG-Myc-CMV-25 expression vector (Sigma Aldrich, St Louis, MO), or empty vector, and transfection by Lipofectamine 2000 (Life Technologies, Grand Island, NY) followed by G418 selection at 400 μg/mL for three to four weeks. LY294002 and U0126 were purchased from LC Laboratories (Woburn, MA), PD166866 and SB431542 were from Sigma Aldrich.
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6

Culturing and Treating Cardiac Fibroblasts

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Human atrial fibroblasts were purchased from Lonza Research Laboratory (Walkersville, MD, USA). As described previously [22 (link)], cells were seeded on uncoated culture discs as monolayers and cultured in Dulbecco’s modified Eagle medium (Thermo Fisher Scientific, Loughborough, UK) containing 10% fetal bovine serum (Hyclone, Logan, UT, USA) and 100 U/mL penicillin–streptomycin (Thermo Fisher Scientific, Loughborough, Gibco, UK) in a humidified atmosphere of 5% CO2 at 37 °C. Cells used in this study were from passages 4–6 to avoid possible variations in cellular function. Cardiac fibroblasts treated without and with recombinant mouse FGF-23 (1, 5 or 25 ng/mL; R&D Systems, Abingdon, UK) in the presence and absence of an FGF receptor 1 antagonist (PD166866, 1 μM; Sigma, St. Louis, MO, USA), a free Ca2+ chelator (EGTA, 1 mM; Sigma), or a PLC inhibitor (U73122, 1 μM; Abcam, Cambridge, UK) for 48 h were harvested for further analysis.
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7

Melanoma Cell Isolation and Culture

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Cells were cultivated under standard conditions (37 °C, 5% CO2) and grown in melanoma isolation media (MIM): MCDB153 medium / Leibovitz’s L-15 medium (4/1) supplemented with 2% FBS, 7.5% NaHCO3, 5 µg/ml Insulin, 5 ng/ml EGF, 1.68 mM CaCl2, 50 mg/L streptomycin sulphate and 30 mg/L penicillin. Cells were split when 90% confluent using a 0.25% trypsin/EDTA solution. If not otherwise indicated, experiments were performed in MIM for 48 hours. 4-phenylbutyric acid (4-PBA) was obtained from Santa Cruz Biotechnology (Dallas, USA) and PD166866 and thapsigargin were obtained from Sigma-Aldrich (St. Louis, USA).
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8

Matrigel Invasion Assay for Cell Migration

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Cells were pre-treated with 4-PBA and PD166866 (Sigma-Aldrich) and maintained in MIM for 16 hours. Afterwards cells were detached and re-suspended in MIM without FBS and 0.1% BSA containing the described treatments. 25.000 cells were then seeded onto matrigel invasion chambers (Corning, New York, USA), which were prepared according to the manufacturers protocol. After 8 hours, cells were fixed with formaldehyde (Sigma-Aldrich), stained with crystal violet (Sigma-Aldrich) and invading cells were counted under the microscope.
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9

Validated Compounds for Signaling Assays

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Defined compounds used for validation experiments were ordered de novo from various suppliers: SB-431542, PD-173074, U0126, Salinomycin, Nigericin, PD-161570, PD-166285, PD-166866, Idoxuridine and 5-Azacytidine (all from Sigma); Y-27632 2HCl, GSK429286A, Nintedanib, Pazopanib, Sorafenib, Vatalanib, Axitinib, Sunitinib, Erlotinib, Lapatinib, Gefitinib, Dasatinib, Crizotinib, Vandetanib, AEE788, Cediranib, AZD4547, CP673451, TSU-68 and KX2-391 (all from Selleck Chemicals); PP1, PP2, Rho kinase inhibitor V, SR-3677, GSK269962, SB-772077B (all from Tocris); Fasudil from Enamine; CAY10622 and PD-166326 from Cayman; BGJ398 from Axon Medchem; 5-Aza-2′-deoxycytidine from Chem-Impex. The reordered compounds were tested in extended dilution series ranging from 25 μM to 0.04 nM on TGFβ-treated NMuMG cells and from 25 μM to 1 nM on TGFβ-treated Py2T cells.
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