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7 protocols using unc1999

1

Inhibition of Actin Polymerization in Th2 Cells

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10μM UNC1999 (Cayman Chemical) was used to inhibit Ezh2 and 10μM cytochalasin B (Sigma) was used to inhibit actin polymerization. 'mCherry2XNLS-P3D-actin-62R1-pmCherry' (addgene), which expresses nuclear-targeted non-polymerizing R62D mutant of human actin, with an mCherry expressing reporter, was used to specifically inhibit the polymerization of nuclear actin. The plasmid Flag-NLS-actinWT was used as a control (Baarlink et al., 2017 (link); Belin et al., 2015 (link)). The plasmids were transcribed in-vitro and the mRNAs were electroporated (300V, 1ms) into 18hr-differentiated Th2 cells 6hr before harvesting.
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2

HCT116 Cell Growth Assay with UNC1999

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HCT116 cells were obtained from the ATCC. Dilute cell culture-grade trypsin with EDTA (GE Hyclone, 0.05% trypsin, 0.2 g/L EDTA) was used for the serial trypsinization process. A 2% solution of agarose (Sigma) was used for coating 96-well plates. Ultra-low binding round bottom 96-well plates (Thermo) were used for the growth assay. UNC1999 and dimethyl sulfoxide (DMSO) were obtained from Cayman Chemicals and Sigma. UNC1999 was dissolved in DMSO at 10 mM and then diluted to a final concentration of 5 μM in cell culture media. McCoy’s 5A media (Gibco) supplemented with 10% FBS and 1% L-Glutamine was sterile filtered and used for all cell culture experiments.
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3

EZH2 Inhibition in Gal4EED/luc HEK293 Cells

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Cell culturing, luciferase silencing, and transfections of the Luc14 and Gal4EED/luc HEK293 cell lines were performed as described in Daer et al. 2017. Briefly, cells were transfected in 12-well plates with Lipid-DNA complexes [500 ng plasmid, 3 μl Lipofectamine LTX, 1 μl Plus Reagent (Life Technologies)]. EZH2 inhibition was carried out with UNC1999 (Cayman Chemical) dissolved in DMSO to 10 mM. Gal4EED/luc cells were treated for four days with 1 μg/μl doxycycline to induce silencing. Cells were grown in dox-free media for one day and then treated with 10 μM UNC1999 by diluting 1 μl of 10 mM UNC1999 per 1 ml media for three days. Control cells were treated with 1 μl of DMSO (vehicle) per 1 ml media. Cells were grown for one day in media without UNC1999 prior to luciferase assays, transfection with Cas9/sgRNA-expressing plasmids (described above), or ChIP-qPCR.
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4

UNC1999 Solubilization and Administration

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UNC1999 (Cayman Chemical, Ann Arbor, MI) was diluted at 2.5 mg/mL in 4% N, N-Dimethylacetamide (DMA; Sigma), 5% Solutol (Sigma) and 91% normal saline drug vehicle. To dissolve UNC1999, DMA was added to UNC1999 and vortexed to mix. Once dissolved, UNC1999 was added to a 0.9% saline solution containing Solutol and bath sonicated twice for twenty-minutes each at 65˚C. Mice were treated with 20 mg/kg UNC1999 or drug vehicle six hours (3 hours post diazepam), 24 hours, and 48 hours post SE.
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5

Epigenetic Regulation by EZH2 Inhibitor

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Cell permeable EZH2 inhibitor UNC1999 (Cayman Chemical, catalog no. 14621) was used at concentrations 1, 1.75, or 2.5 μM. Short-term inhibition was done for 4 days. and long-term inhibition was done for 14 to 21 days. For capacitation, the inhibitor was applied 4 days before the beginning of the transition and then maintained throughout the protocol.
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6

Cytotoxicity Assay of TNFα Inhibitors

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Recombinant human TNFα was purchased from Peprotech. The following inhibitors were used in this study: Birnapant, LCL-161, UNC1999, GSK343 (Cayman Chemical), TPCA-1, AZD1480, GSK126 (Selleckchem), DEAB (Sigma–Aldrich). CellTiter-Glo (Promega) was used to measure cell viability. EF.STAT3-C.Ubc.GFP was a gift from Linzhao Cheng (Addgene plasmid # 24983).
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7

Resuspension and preparation of compounds

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Doxorubicin, Ara-C, and Bleomycin were obtained from Cayman Chemical and resuspended in sterile water. Etoposide was purchased from Sigma-Aldrich and resuspended in DMSO.
For ex vivo studies, GSK126 and UNC1999 were purchased from Cayman Chemical; EPZ-6438 was purchased from Selleckchem and Palbociclib was obtained from LC Laboratories. They were resuspended in DMSO.
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